RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 MYO3AQ8NEV4 1616 aa9.65□□□□□ -0.86
PTPN20-208ENST00000395727 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
PTPN20-208ENST00000395727 ESF1Q9H501 851 aaKnown RBP9.65□□□□□ -0.86
PTPN20-208ENST00000395727 STRCQ7RTU9 1775 aa9.65□□□□□ -0.87
PTPN20-208ENST00000395727 ZMYM3Q14202 1370 aa9.64□□□□□ -0.87
PTPN20-208ENST00000395727 SNPHO15079 494 aa9.64□□□□□ -0.87
PTPN20-208ENST00000395727 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
PTPN20-208ENST00000395727 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
PTPN20-208ENST00000395727 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
PTPN20-208ENST00000395727 TCOF1Q13428 1488 aaKnown RBP9.64□□□□□ -0.87
PTPN20-208ENST00000395727 PTPRKQ15262 1439 aa9.64□□□□□ -0.87
PTPN20-208ENST00000395727 ARHGEF1Q92888 912 aaKnown RBP9.63□□□□□ -0.87
PTPN20-208ENST00000395727 PTPRTO14522 1441 aa9.63□□□□□ -0.87
PTPN20-208ENST00000395727 PTPN23Q9H3S7 1636 aa9.63□□□□□ -0.87
PTPN20-208ENST00000395727 CEP170BQ9Y4F5 1589 aaPredicted RBP9.63□□□□□ -0.87
PTPN20-208ENST00000395727 PZPP20742 1482 aa9.62□□□□□ -0.87
PTPN20-208ENST00000395727 PLA2R1Q13018 1463 aa9.62□□□□□ -0.87
PTPN20-208ENST00000395727 HSPA2P54652 639 aa9.62□□□□□ -0.87
PTPN20-208ENST00000395727 DNMT1P26358 1616 aaKnown RBP9.62□□□□□ -0.87
PTPN20-208ENST00000395727 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 MROH1Q8NDA8 1641 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 TSPY4P0CV99 314 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 TSPY10P0CW01 314 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 NCOA1Q15788 1441 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 FGD6Q6ZV73 1430 aa9.61□□□□□ -0.87
PTPN20-208ENST00000395727 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPN20-208ENST00000395727 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
PTPN20-208ENST00000395727 PRDM15P57071 1507 aaPredicted RBP9.6□□□□□ -0.87
PTPN20-208ENST00000395727 ERBINQ96RT1 1412 aa9.59□□□□□ -0.87
PTPN20-208ENST00000395727 DPYSL4O14531 572 aa9.59□□□□□ -0.87
PTPN20-208ENST00000395727 DEPDC5O75140 1603 aa9.59□□□□□ -0.87
PTPN20-208ENST00000395727 CAMSAP1Q5T5Y3 1602 aa9.59□□□□□ -0.87
PTPN20-208ENST00000395727 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
PTPN20-208ENST00000395727 ABCC5O15440 1437 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 DAPK1P53355 1430 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 ABCC3O15438 1527 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 GPR153Q6NV75 609 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 GGT6Q6P531 493 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 FBXO41Q8TF61 875 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 SPATA31D1Q6ZQQ2 1576 aa9.58□□□□□ -0.88
PTPN20-208ENST00000395727 KIF3BO15066 747 aa9.57□□□□□ -0.88
PTPN20-208ENST00000395727 ADGRL2O95490 1459 aa9.57□□□□□ -0.88
PTPN20-208ENST00000395727 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
PTPN20-208ENST00000395727 NLRP1Q9C000 1473 aa9.57□□□□□ -0.88
PTPN20-208ENST00000395727 TBC1D12O60347 775 aa9.56□□□□□ -0.88
PTPN20-208ENST00000395727 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
PTPN20-208ENST00000395727 PDIA6Q15084 440 aa9.56□□□□□ -0.88
PTPN20-208ENST00000395727 ZNF710Q8N1W2 664 aa9.56□□□□□ -0.88
PTPN20-208ENST00000395727 ARHGAP31Q2M1Z3 1444 aa9.56□□□□□ -0.88
PTPN20-208ENST00000395727 KIF15Q9NS87 1388 aa9.55□□□□□ -0.88
PTPN20-208ENST00000395727 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
PTPN20-208ENST00000395727 LTBP4Q8N2S1 1624 aa9.55□□□□□ -0.88
PTPN20-208ENST00000395727 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
PTPN20-208ENST00000395727 POLR1AO95602 1720 aaPredicted RBP9.54□□□□□ -0.88
PTPN20-208ENST00000395727 TNRQ92752 1358 aa9.54□□□□□ -0.88
PTPN20-208ENST00000395727 SPDYE16A6NNV3 312 aaPredicted RBP9.54□□□□□ -0.88
PTPN20-208ENST00000395727 HOXB1P14653 301 aaPredicted RBP9.54□□□□□ -0.88
PTPN20-208ENST00000395727 LMTK2Q8IWU2 1503 aa9.54□□□□□ -0.88
PTPN20-208ENST00000395727 WASHC2CQ9Y4E1 1318 aa9.54□□□□□ -0.88
PTPN20-208ENST00000395727 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTPN20-208ENST00000395727 ANO8Q9HCE9 1232 aaPredicted RBP9.53□□□□□ -0.88
PTPN20-208ENST00000395727 CEP152O94986 1710 aa9.53□□□□□ -0.88
PTPN20-208ENST00000395727 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
PTPN20-208ENST00000395727 ANKRD30AQ9BXX3 1397 aa9.52□□□□□ -0.88
PTPN20-208ENST00000395727 ST18O60284 1047 aa9.52□□□□□ -0.89
PTPN20-208ENST00000395727 EVI5O60447 810 aa9.52□□□□□ -0.89
PTPN20-208ENST00000395727 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
PTPN20-208ENST00000395727 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
PTPN20-208ENST00000395727 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.89
PTPN20-208ENST00000395727 KDM5AP29375 1690 aaKnown RBP9.51□□□□□ -0.89
PTPN20-208ENST00000395727 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
PTPN20-208ENST00000395727 MED14O60244 1454 aa9.51□□□□□ -0.89
PTPN20-208ENST00000395727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.5□□□□□ -0.89
PTPN20-208ENST00000395727 NUDT7P0C024 238 aa9.5□□□□□ -0.89
PTPN20-208ENST00000395727 SEMA3EO15041 775 aa9.49□□□□□ -0.89
PTPN20-208ENST00000395727 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
PTPN20-208ENST00000395727 EFCAB6Q5THR3 1501 aa9.49□□□□□ -0.89
PTPN20-208ENST00000395727 UBR1Q8IWV7 1749 aa9.48□□□□□ -0.89
PTPN20-208ENST00000395727 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
PTPN20-208ENST00000395727 PTGER2P43116 358 aa9.48□□□□□ -0.89
PTPN20-208ENST00000395727 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
PTPN20-208ENST00000395727 UNC13BO14795 1591 aa9.48□□□□□ -0.89
PTPN20-208ENST00000395727 ROCK1Q13464 1354 aa9.48□□□□□ -0.89
PTPN20-208ENST00000395727 KANK1Q14678 1352 aa9.48□□□□□ -0.89
PTPN20-208ENST00000395727 ARHGAP23Q9P227 1491 aa9.47□□□□□ -0.89
PTPN20-208ENST00000395727 SLIT1O75093 1534 aa9.47□□□□□ -0.89
PTPN20-208ENST00000395727 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
PTPN20-208ENST00000395727 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
PTPN20-208ENST00000395727 NBR1Q14596 966 aa9.47□□□□□ -0.89
PTPN20-208ENST00000395727 THEMISQ8N1K5 641 aaPredicted RBP9.47□□□□□ -0.89
PTPN20-208ENST00000395727 BCANQ96GW7 911 aa9.47□□□□□ -0.89
PTPN20-208ENST00000395727 ANKRD50Q9ULJ7 1429 aa9.46□□□□□ -0.9
PTPN20-208ENST00000395727 CPS1P31327 1500 aa9.46□□□□□ -0.9
PTPN20-208ENST00000395727 TET3O43151 1660 aa9.45□□□□□ -0.9
PTPN20-208ENST00000395727 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
PTPN20-208ENST00000395727 NOS1P29475 1434 aa9.45□□□□□ -0.9
PTPN20-208ENST00000395727 IQGAP1P46940 1657 aa9.45□□□□□ -0.9
PTPN20-208ENST00000395727 GCC2Q8IWJ2 1684 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms