RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 RIMBP3Q9UFD9 1639 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 RICTORQ6R327 1708 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 SIGLEC1Q9BZZ2 1709 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 ZBED9Q6R2W3 1325 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 TSPOAP1O95153 1857 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
MATR3-230ENST00000394800 GPATCH11Q8N954 259 aa7.53□□□□□ -1.2
MATR3-230ENST00000394800 CC2D1BQ5T0F9 858 aaKnown RBP7.53□□□□□ -1.2
MATR3-230ENST00000394800 NEO1Q92859 1461 aa7.53□□□□□ -1.2
MATR3-230ENST00000394800 DIP2CQ9Y2E4 1556 aa7.53□□□□□ -1.2
MATR3-230ENST00000394800 SENP3Q9H4L4 574 aaPredicted RBP7.53□□□□□ -1.2
MATR3-230ENST00000394800 FAM69CQ0P6D2 419 aa7.53□□□□□ -1.2
MATR3-230ENST00000394800 LMTK2Q8IWU2 1503 aa7.53□□□□□ -1.2
MATR3-230ENST00000394800 TMF1P82094 1093 aa7.53□□□□□ -1.2
MATR3-230ENST00000394800 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
MATR3-230ENST00000394800 SALL2Q9Y467 1007 aaPredicted RBP7.53□□□□□ -1.2
MATR3-230ENST00000394800 PARD3Q8TEW0 1356 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 MAP3K4Q9Y6R4 1608 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 KDM4AO75164 1064 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 CFAP74Q9C0B2 1584 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 IFT172Q9UG01 1749 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 FAM193AP78312 1265 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 ABCC3O15438 1527 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 NOS1P29475 1434 aa7.52□□□□□ -1.21
MATR3-230ENST00000394800 MYBBP1AQ9BQG0 1328 aaKnown RBP7.51□□□□□ -1.21
MATR3-230ENST00000394800 SCAF11Q99590 1463 aaKnown RBP7.51□□□□□ -1.21
MATR3-230ENST00000394800 FOSBP53539 338 aa7.51□□□□□ -1.21
MATR3-230ENST00000394800 TMEM132EQ6IEE7 984 aa7.51□□□□□ -1.21
MATR3-230ENST00000394800 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
MATR3-230ENST00000394800 LRPPRCP42704 1394 aaKnown RBP7.51□□□□□ -1.21
MATR3-230ENST00000394800 MEX3CQ5U5Q3 659 aaKnown RBP7.51□□□□□ -1.21
MATR3-230ENST00000394800 BRPF3Q9ULD4 1205 aa7.51□□□□□ -1.21
MATR3-230ENST00000394800 BBXQ8WY36 941 aaPredicted RBP7.5□□□□□ -1.21
MATR3-230ENST00000394800 GZF1Q9H116 711 aaPredicted RBP7.5□□□□□ -1.21
MATR3-230ENST00000394800 IDI1Q13907 227 aa7.5□□□□□ -1.21
MATR3-230ENST00000394800 RALBP1Q15311 655 aa7.5□□□□□ -1.21
MATR3-230ENST00000394800 ADGRB3O60242 1522 aa7.5□□□□□ -1.21
MATR3-230ENST00000394800 NLRP13Q86W25 1043 aa7.5□□□□□ -1.21
MATR3-230ENST00000394800 BRD4O60885 1362 aaPredicted RBP7.5□□□□□ -1.21
MATR3-230ENST00000394800 DIP2BQ9P265 1576 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 KTN1Q86UP2 1357 aaKnown RBP7.49□□□□□ -1.21
MATR3-230ENST00000394800 SYNMO15061 1565 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 MTMR7Q9Y216 660 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 TRAK1Q9UPV9 953 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 MYOM2P54296 1465 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 KIAA1210Q9ULL0 1709 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 NEURL4Q96JN8 1562 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 MYO5BQ9ULV0 1848 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 MYOM1P52179 1685 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 ECM2O94769 699 aaPredicted RBP7.49□□□□□ -1.21
MATR3-230ENST00000394800 PPLO60437 1756 aa7.49□□□□□ -1.21
MATR3-230ENST00000394800 NRXN1Q9ULB1 1477 aa7.48□□□□□ -1.21
MATR3-230ENST00000394800 FBXO31Q5XUX0 539 aaPredicted RBP7.48□□□□□ -1.21
MATR3-230ENST00000394800 CAMSAP1Q5T5Y3 1602 aa7.48□□□□□ -1.21
MATR3-230ENST00000394800 ANAPC15P60006 121 aa7.48□□□□□ -1.21
MATR3-230ENST00000394800 ERVK-7P63135 1459 aa7.48□□□□□ -1.21
MATR3-230ENST00000394800 DNTTIP2Q5QJE6 756 aaKnown RBP7.48□□□□□ -1.21
MATR3-230ENST00000394800 CARD14Q9BXL6 1004 aa7.47□□□□□ -1.21
MATR3-230ENST00000394800 GLI2P10070 1586 aa7.47□□□□□ -1.21
MATR3-230ENST00000394800 PIK3C2GO75747 1445 aa7.47□□□□□ -1.21
MATR3-230ENST00000394800 ADGRB1O14514 1584 aa7.47□□□□□ -1.21
MATR3-230ENST00000394800 C14orf93Q9H972 538 aaKnown RBP7.47□□□□□ -1.21
MATR3-230ENST00000394800 PIK3C2BO00750 1634 aa7.46□□□□□ -1.21
MATR3-230ENST00000394800 WDR78Q5VTH9 848 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 CDCA7LQ96GN5 454 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 CHMP4BQ9H444 224 aaKnown RBP7.45□□□□□ -1.22
MATR3-230ENST00000394800 KNSTRNQ9Y448 316 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 HMGB1P1B2RPK0 211 aaPredicted RBP7.45□□□□□ -1.22
MATR3-230ENST00000394800 NPM3O75607 178 aaKnown RBP7.45□□□□□ -1.22
MATR3-230ENST00000394800 HSP90AA1P07900 732 aaKnown RBP7.45□□□□□ -1.22
MATR3-230ENST00000394800 CERS3Q8IU89 383 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 NUDCQ9Y266 331 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 MAPK8IP2Q13387 824 aaPredicted RBP7.45□□□□□ -1.22
MATR3-230ENST00000394800 ZMYND15Q9H091 742 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 SLC12A5Q9H2X9 1139 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 ARHGAP31Q2M1Z3 1444 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 SMG6Q86US8 1419 aaKnown RBP7.45□□□□□ -1.22
MATR3-230ENST00000394800 NEXMIFQ5QGS0 1516 aa7.45□□□□□ -1.22
MATR3-230ENST00000394800 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
MATR3-230ENST00000394800 CENPJQ9HC77 1338 aaPredicted RBP7.44□□□□□ -1.22
MATR3-230ENST00000394800 PPP2R1AP30153 589 aa7.44□□□□□ -1.22
MATR3-230ENST00000394800 MLECQ14165 292 aa7.44□□□□□ -1.22
MATR3-230ENST00000394800 HSP90AA2PQ14568 343 aaPredicted RBP7.44□□□□□ -1.22
MATR3-230ENST00000394800 SAFB2Q14151 953 aaKnown RBP eCLIP7.44□□□□□ -1.22
MATR3-230ENST00000394800 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
MATR3-230ENST00000394800 KDM5AP29375 1690 aaKnown RBP7.44□□□□□ -1.22
MATR3-230ENST00000394800 KIF13AQ9H1H9 1805 aa7.44□□□□□ -1.22
MATR3-230ENST00000394800 EIF3AQ14152 1382 aaKnown RBP7.43□□□□□ -1.22
MATR3-230ENST00000394800 B4GALNT3Q6L9W6 998 aa7.43□□□□□ -1.22
MATR3-230ENST00000394800 PREX1Q8TCU6 1659 aa7.43□□□□□ -1.22
MATR3-230ENST00000394800 ZMYM4Q5VZL5 1548 aa7.43□□□□□ -1.22
MATR3-230ENST00000394800 SBNO2Q9Y2G9 1366 aa7.43□□□□□ -1.22
MATR3-230ENST00000394800 CDCA8Q53HL2 280 aa7.43□□□□□ -1.22
MATR3-230ENST00000394800 SETBP1Q9Y6X0 1596 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 MYO3AQ8NEV4 1616 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 RNF123Q5XPI4 1314 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 TMEM131LA2VDJ0 1609 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms