RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
RTN4-206ENST00000394611 L1TD1Q5T7N2 865 aaKnown RBP11.25□□□□□ -0.61
RTN4-206ENST00000394611 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
RTN4-206ENST00000394611 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
RTN4-206ENST00000394611 MYBBP1AQ9BQG0 1328 aaKnown RBP11.24□□□□□ -0.61
RTN4-206ENST00000394611 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
RTN4-206ENST00000394611 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
RTN4-206ENST00000394611 FER1L4A9Z1Z3 1794 aa11.24□□□□□ -0.61
RTN4-206ENST00000394611 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
RTN4-206ENST00000394611 UBE2Q2Q8WVN8 375 aa11.24□□□□□ -0.61
RTN4-206ENST00000394611 E9PCH4 1651 aa11.23□□□□□ -0.61
RTN4-206ENST00000394611 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
RTN4-206ENST00000394611 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
RTN4-206ENST00000394611 TET3O43151 1660 aa11.23□□□□□ -0.61
RTN4-206ENST00000394611 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
RTN4-206ENST00000394611 ZMYM3Q14202 1370 aa11.23□□□□□ -0.61
RTN4-206ENST00000394611 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
RTN4-206ENST00000394611 NPATQ14207 1427 aa11.22□□□□□ -0.61
RTN4-206ENST00000394611 EFCAB6Q5THR3 1501 aa11.22□□□□□ -0.61
RTN4-206ENST00000394611 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
RTN4-206ENST00000394611 RIMS1Q86UR5 1692 aaKnown RBP11.22□□□□□ -0.61
RTN4-206ENST00000394611 ADAMTSL3P82987 1691 aa11.21□□□□□ -0.61
RTN4-206ENST00000394611 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
RTN4-206ENST00000394611 ZMYND15Q9H091 742 aa11.21□□□□□ -0.61
RTN4-206ENST00000394611 ZC3H13Q5T200 1668 aaKnown RBP11.21□□□□□ -0.61
RTN4-206ENST00000394611 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.62
RTN4-206ENST00000394611 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
RTN4-206ENST00000394611 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
RTN4-206ENST00000394611 MS4A1P11836 297 aa11.2□□□□□ -0.62
RTN4-206ENST00000394611 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
RTN4-206ENST00000394611 RALBP1Q15311 655 aa11.19□□□□□ -0.62
RTN4-206ENST00000394611 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
RTN4-206ENST00000394611 ELL2O00472 640 aaPredicted RBP11.19□□□□□ -0.62
RTN4-206ENST00000394611 PLA2R1Q13018 1463 aa11.18□□□□□ -0.62
RTN4-206ENST00000394611 ANKRD30BQ9BXX2 1392 aa11.18□□□□□ -0.62
RTN4-206ENST00000394611 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
RTN4-206ENST00000394611 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
RTN4-206ENST00000394611 UGGT1Q9NYU2 1555 aa11.18□□□□□ -0.62
RTN4-206ENST00000394611 C3P01024 1663 aa11.18□□□□□ -0.62
RTN4-206ENST00000394611 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
RTN4-206ENST00000394611 NUTM2DQ5VT03 806 aaPredicted RBP11.17□□□□□ -0.62
RTN4-206ENST00000394611 TMF1P82094 1093 aa11.17□□□□□ -0.62
RTN4-206ENST00000394611 ARHGAP31Q2M1Z3 1444 aa11.17□□□□□ -0.62
RTN4-206ENST00000394611 SEC24BO95487 1268 aa11.17□□□□□ -0.62
RTN4-206ENST00000394611 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
RTN4-206ENST00000394611 PREX1Q8TCU6 1659 aa11.16□□□□□ -0.62
RTN4-206ENST00000394611 SPHKAPQ2M3C7 1700 aa11.16□□□□□ -0.62
RTN4-206ENST00000394611 MROH2AA6NES4 1674 aa11.16□□□□□ -0.62
RTN4-206ENST00000394611 PTPRMP28827 1452 aa11.15□□□□□ -0.62
RTN4-206ENST00000394611 ERVK-7P63135 1459 aa11.15□□□□□ -0.62
RTN4-206ENST00000394611 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
RTN4-206ENST00000394611 GOLGA6L22H0YM25 854 aa11.15□□□□□ -0.62
RTN4-206ENST00000394611 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.63
RTN4-206ENST00000394611 PTPRTO14522 1441 aa11.15□□□□□ -0.63
RTN4-206ENST00000394611 SYNMO15061 1565 aa11.14□□□□□ -0.63
RTN4-206ENST00000394611 CENPJQ9HC77 1338 aaPredicted RBP11.14□□□□□ -0.63
RTN4-206ENST00000394611 NOS1P29475 1434 aa11.14□□□□□ -0.63
RTN4-206ENST00000394611 TRAK2O60296 914 aa11.14□□□□□ -0.63
RTN4-206ENST00000394611 IDI1Q13907 227 aa11.14□□□□□ -0.63
RTN4-206ENST00000394611 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
RTN4-206ENST00000394611 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
RTN4-206ENST00000394611 RNF214Q8ND24 703 aa11.13□□□□□ -0.63
RTN4-206ENST00000394611 U2AF1L5P0DN76 240 aaPredicted RBP11.13□□□□□ -0.63
RTN4-206ENST00000394611 U2AF1Q01081 240 aaKnown RBP eCLIP11.13□□□□□ -0.634e-6■□□□□ 9.4
RTN4-206ENST00000394611 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
RTN4-206ENST00000394611 TRPM2O94759 1503 aa11.13□□□□□ -0.63
RTN4-206ENST00000394611 TNRQ92752 1358 aa11.12□□□□□ -0.63
RTN4-206ENST00000394611 LNPKQ9C0E8 428 aa11.12□□□□□ -0.63
RTN4-206ENST00000394611 DDX49Q9Y6V7 483 aaKnown RBP11.12□□□□□ -0.63
RTN4-206ENST00000394611 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
RTN4-206ENST00000394611 SOX12O15370 315 aa11.12□□□□□ -0.63
RTN4-206ENST00000394611 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
RTN4-206ENST00000394611 SMC4Q9NTJ3 1288 aa11.11□□□□□ -0.63
RTN4-206ENST00000394611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
RTN4-206ENST00000394611 TNNQ9UQP3 1299 aa11.11□□□□□ -0.63
RTN4-206ENST00000394611 IGHDP01880 384 aa11.1□□□□□ -0.63
RTN4-206ENST00000394611 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
RTN4-206ENST00000394611 MORC1Q86VD1 984 aa11.09□□□□□ -0.63
RTN4-206ENST00000394611 SLC52A1Q9NWF4 448 aa11.09□□□□□ -0.63
RTN4-206ENST00000394611 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
RTN4-206ENST00000394611 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
RTN4-206ENST00000394611 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
RTN4-206ENST00000394611 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
RTN4-206ENST00000394611 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
RTN4-206ENST00000394611 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
RTN4-206ENST00000394611 C22orf23Q9BZE7 217 aa11.07□□□□□ -0.64
RTN4-206ENST00000394611 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
RTN4-206ENST00000394611 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
RTN4-206ENST00000394611 KIF1BO60333 1816 aa11.07□□□□□ -0.64
RTN4-206ENST00000394611 RWDD1Q9H446 243 aaPredicted RBP11.06□□□□□ -0.64
RTN4-206ENST00000394611 ZHX1Q9UKY1 873 aaPredicted RBP11.06□□□□□ -0.64
RTN4-206ENST00000394611 MYO3AQ8NEV4 1616 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 TSR2Q969E8 191 aaKnown RBP11.06□□□□□ -0.64
RTN4-206ENST00000394611 STK26Q9P289 416 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 SPATA31E1Q6ZUB1 1445 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 ESPNB1AK53 854 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
RTN4-206ENST00000394611 MCTP1Q6DN14 999 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms