RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
APLF-202ENST00000394342 DCAF11Q8TEB1 546 aa12.43□□□□□ -0.42
APLF-202ENST00000394342 SLAIN2Q9P270 581 aa12.43□□□□□ -0.42
APLF-202ENST00000394342 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
APLF-202ENST00000394342 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
APLF-202ENST00000394342 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
APLF-202ENST00000394342 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
APLF-202ENST00000394342 MST1RQ04912 1400 aa12.41□□□□□ -0.42
APLF-202ENST00000394342 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
APLF-202ENST00000394342 TMEM132EQ6IEE7 984 aa12.41□□□□□ -0.42
APLF-202ENST00000394342 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
APLF-202ENST00000394342 COL16A1Q07092 1604 aaPredicted RBP12.4□□□□□ -0.42
APLF-202ENST00000394342 STK26Q9P289 416 aa12.4□□□□□ -0.42
APLF-202ENST00000394342 SIRT1Q96EB6 747 aa12.39□□□□□ -0.43
APLF-202ENST00000394342 TRPM1Q7Z4N2 1603 aa12.39□□□□□ -0.43
APLF-202ENST00000394342 SHPRHQ149N8 1683 aa12.38□□□□□ -0.43
APLF-202ENST00000394342 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
APLF-202ENST00000394342 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
APLF-202ENST00000394342 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
APLF-202ENST00000394342 MED1Q15648 1581 aaPredicted RBP12.36□□□□□ -0.43
APLF-202ENST00000394342 C1orf167Q5SNV9 1468 aa12.36□□□□□ -0.43
APLF-202ENST00000394342 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
APLF-202ENST00000394342 PLEKHH1Q9ULM0 1364 aa12.35□□□□□ -0.43
APLF-202ENST00000394342 ITSN1Q15811 1721 aa12.35□□□□□ -0.43
APLF-202ENST00000394342 BRINP3Q76B58 766 aa12.34□□□□□ -0.43
APLF-202ENST00000394342 L3MBTL2Q969R5 705 aa12.34□□□□□ -0.43
APLF-202ENST00000394342 QRICH2Q9H0J4 1663 aa12.33□□□□□ -0.44
APLF-202ENST00000394342 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
APLF-202ENST00000394342 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
APLF-202ENST00000394342 PRAM1Q96QH2 718 aa12.32□□□□□ -0.44
APLF-202ENST00000394342 POGKQ9P215 609 aa12.31□□□□□ -0.44
APLF-202ENST00000394342 TRAK1Q9UPV9 953 aa12.31□□□□□ -0.44
APLF-202ENST00000394342 JCADQ9P266 1359 aa12.3□□□□□ -0.44
APLF-202ENST00000394342 PCGF6Q9BYE7 350 aa12.3□□□□□ -0.44
APLF-202ENST00000394342 MARF1Q9Y4F3 1742 aaKnown RBP12.29□□□□□ -0.44
APLF-202ENST00000394342 TONSLQ96HA7 1378 aa12.29□□□□□ -0.44
APLF-202ENST00000394342 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
APLF-202ENST00000394342 SAFB2Q14151 953 aaKnown RBP eCLIP12.28□□□□□ -0.44
APLF-202ENST00000394342 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
APLF-202ENST00000394342 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
APLF-202ENST00000394342 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
APLF-202ENST00000394342 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.44
APLF-202ENST00000394342 COL22A1Q8NFW1 1626 aaPredicted RBP12.27□□□□□ -0.44
APLF-202ENST00000394342 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
APLF-202ENST00000394342 ORAI2Q96SN7 254 aa12.27□□□□□ -0.45
APLF-202ENST00000394342 ESCO1Q5FWF5 840 aa12.26□□□□□ -0.45
APLF-202ENST00000394342 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
APLF-202ENST00000394342 ZBTB22O15209 634 aa12.25□□□□□ -0.45
APLF-202ENST00000394342 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
APLF-202ENST00000394342 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
APLF-202ENST00000394342 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
APLF-202ENST00000394342 PXDNQ92626 1479 aa12.25□□□□□ -0.45
APLF-202ENST00000394342 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
APLF-202ENST00000394342 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
APLF-202ENST00000394342 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
APLF-202ENST00000394342 GPRASP1Q5JY77 1395 aa12.24□□□□□ -0.45
APLF-202ENST00000394342 SPATA31A6Q5VVP1 1343 aa12.24□□□□□ -0.45
APLF-202ENST00000394342 NPHP3Q7Z494 1330 aa12.24□□□□□ -0.45
APLF-202ENST00000394342 DDX17Q92841 729 aaKnown RBP12.24□□□□□ -0.45
APLF-202ENST00000394342 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
APLF-202ENST00000394342 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
APLF-202ENST00000394342 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
APLF-202ENST00000394342 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
APLF-202ENST00000394342 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
APLF-202ENST00000394342 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
APLF-202ENST00000394342 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
APLF-202ENST00000394342 LRP6O75581 1613 aa12.22□□□□□ -0.45
APLF-202ENST00000394342 ATP7BP35670 1465 aa12.21□□□□□ -0.45
APLF-202ENST00000394342 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
APLF-202ENST00000394342 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
APLF-202ENST00000394342 FOXO3O43524 673 aa12.2□□□□□ -0.46
APLF-202ENST00000394342 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
APLF-202ENST00000394342 PRR36Q9H6K5 1346 aa12.19□□□□□ -0.46
APLF-202ENST00000394342 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
APLF-202ENST00000394342 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
APLF-202ENST00000394342 CRYBG1Q9Y4K1 1723 aa12.18□□□□□ -0.46
APLF-202ENST00000394342 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
APLF-202ENST00000394342 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
APLF-202ENST00000394342 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
APLF-202ENST00000394342 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
APLF-202ENST00000394342 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
APLF-202ENST00000394342 CARD11Q9BXL7 1154 aa12.17□□□□□ -0.46
APLF-202ENST00000394342 TNS3Q68CZ2 1445 aa12.17□□□□□ -0.46
APLF-202ENST00000394342 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
APLF-202ENST00000394342 XPCQ01831 940 aaPredicted RBP12.16□□□□□ -0.46
APLF-202ENST00000394342 PSME1Q06323 249 aa12.16□□□□□ -0.46
APLF-202ENST00000394342 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
APLF-202ENST00000394342 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
APLF-202ENST00000394342 SPATA31A3Q5VYP0 1347 aa12.15□□□□□ -0.46
APLF-202ENST00000394342 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
APLF-202ENST00000394342 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
APLF-202ENST00000394342 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.46
APLF-202ENST00000394342 EVC2Q86UK5 1308 aa12.14□□□□□ -0.47
APLF-202ENST00000394342 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
APLF-202ENST00000394342 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
APLF-202ENST00000394342 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
APLF-202ENST00000394342 RGS17Q9UGC6 210 aaPredicted RBP12.14□□□□□ -0.47
APLF-202ENST00000394342 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
APLF-202ENST00000394342 ARHGEF10O15013 1369 aa12.14□□□□□ -0.47
APLF-202ENST00000394342 MON2Q7Z3U7 1717 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms