RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 PANK1Q8TE04 598 aa13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 CFAP43Q8NDM7 1665 aa13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 A2MP01023 1474 aa13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
MTHFD2-201ENST00000394053 ABCC2Q92887 1545 aa13.31□□□□□ -0.28
MTHFD2-201ENST00000394053 DUOX2Q9NRD8 1548 aa13.31□□□□□ -0.28
MTHFD2-201ENST00000394053 ZNF518AQ6AHZ1 1483 aa13.3□□□□□ -0.28
MTHFD2-201ENST00000394053 TAF7LQ5H9L4 462 aa13.3□□□□□ -0.28
MTHFD2-201ENST00000394053 KIF16BQ96L93 1317 aa13.3□□□□□ -0.28
MTHFD2-201ENST00000394053 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
MTHFD2-201ENST00000394053 TSR2Q969E8 191 aaKnown RBP13.3□□□□□ -0.28
MTHFD2-201ENST00000394053 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
MTHFD2-201ENST00000394053 PDE4AP27815 886 aa13.29□□□□□ -0.28
MTHFD2-201ENST00000394053 SLKQ9H2G2 1235 aaPredicted RBP13.29□□□□□ -0.28
MTHFD2-201ENST00000394053 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
MTHFD2-201ENST00000394053 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
MTHFD2-201ENST00000394053 RBM33Q96EV2 1170 aaKnown RBP13.29□□□□□ -0.28
MTHFD2-201ENST00000394053 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
MTHFD2-201ENST00000394053 SYTL4Q96C24 671 aaPredicted RBP13.28□□□□□ -0.28
MTHFD2-201ENST00000394053 FAM135AQ9P2D6 1515 aa13.28□□□□□ -0.28
MTHFD2-201ENST00000394053 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
MTHFD2-201ENST00000394053 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
MTHFD2-201ENST00000394053 SCAF11Q99590 1463 aaKnown RBP13.27□□□□□ -0.28
MTHFD2-201ENST00000394053 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.28
MTHFD2-201ENST00000394053 NEXNQ0ZGT2 675 aa13.27□□□□□ -0.29
MTHFD2-201ENST00000394053 GAS2L2Q8NHY3 880 aa13.27□□□□□ -0.29
MTHFD2-201ENST00000394053 BCAR3O75815 825 aa13.26□□□□□ -0.29
MTHFD2-201ENST00000394053 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
MTHFD2-201ENST00000394053 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
MTHFD2-201ENST00000394053 WASLO00401 505 aaPredicted RBP13.26□□□□□ -0.29
MTHFD2-201ENST00000394053 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
MTHFD2-201ENST00000394053 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
MTHFD2-201ENST00000394053 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
MTHFD2-201ENST00000394053 IPO9Q96P70 1041 aaKnown RBP13.25□□□□□ -0.29
MTHFD2-201ENST00000394053 NME9Q86XW9 330 aa13.25□□□□□ -0.29
MTHFD2-201ENST00000394053 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
MTHFD2-201ENST00000394053 FCHSD2O94868 740 aa13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 WDR63Q8IWG1 891 aa13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 TEX14Q8IWB6 1497 aa13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
MTHFD2-201ENST00000394053 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
MTHFD2-201ENST00000394053 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
MTHFD2-201ENST00000394053 LNPKQ9C0E8 428 aa13.22□□□□□ -0.29
MTHFD2-201ENST00000394053 FOXO3O43524 673 aa13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 TMPOP42166 694 aaKnown RBP13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 TNRQ92752 1358 aa13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 STRN4Q9NRL3 753 aa13.21□□□□□ -0.29
MTHFD2-201ENST00000394053 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
MTHFD2-201ENST00000394053 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
MTHFD2-201ENST00000394053 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
MTHFD2-201ENST00000394053 PZPP20742 1482 aa13.2□□□□□ -0.3
MTHFD2-201ENST00000394053 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
MTHFD2-201ENST00000394053 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
MTHFD2-201ENST00000394053 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
MTHFD2-201ENST00000394053 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
MTHFD2-201ENST00000394053 RALGAPBQ86X10 1494 aa13.19□□□□□ -0.3
MTHFD2-201ENST00000394053 TESK2Q96S53 571 aa13.19□□□□□ -0.3
MTHFD2-201ENST00000394053 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 SLFN5Q08AF3 891 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 AAMPQ13685 434 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
MTHFD2-201ENST00000394053 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 NFE2L2Q16236 605 aa13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
MTHFD2-201ENST00000394053 FBLN1P23142 703 aa13.16□□□□□ -0.3
MTHFD2-201ENST00000394053 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
MTHFD2-201ENST00000394053 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
MTHFD2-201ENST00000394053 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
MTHFD2-201ENST00000394053 KCNH5Q8NCM2 988 aa13.14□□□□□ -0.31
MTHFD2-201ENST00000394053 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
MTHFD2-201ENST00000394053 CT47B1P0C2W7 299 aaPredicted RBP13.14□□□□□ -0.31
MTHFD2-201ENST00000394053 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
MTHFD2-201ENST00000394053 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms