RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SLC24A1O60721 1099 aa33.78■■■■□ 3
LRFN4-202ENST00000393952 DDX10Q13206 875 aaKnown RBP33.78■■■■□ 3
LRFN4-202ENST00000393952 TULP4Q9NRJ4 1543 aa33.76■■■□□ 2.99
LRFN4-202ENST00000393952 NWD1Q149M9 1564 aa33.75■■■□□ 2.99
LRFN4-202ENST00000393952 CDCA8Q53HL2 280 aa33.72■■■□□ 2.99
LRFN4-202ENST00000393952 DIEXFQ68CQ4 756 aaKnown RBP33.72■■■□□ 2.99
LRFN4-202ENST00000393952 EVC2Q86UK5 1308 aa33.71■■■□□ 2.99
LRFN4-202ENST00000393952 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.7■■■□□ 2.99
LRFN4-202ENST00000393952 STRCP1A6NGW2 1772 aa33.66■■■□□ 2.98
LRFN4-202ENST00000393952 ADGRB2O60241 1585 aa33.63■■■□□ 2.97
LRFN4-202ENST00000393952 NKTRP30414 1462 aaKnown RBP33.62■■■□□ 2.97
LRFN4-202ENST00000393952 MYOM1P52179 1685 aa33.61■■■□□ 2.97
LRFN4-202ENST00000393952 CABP2Q9NPB3 220 aa33.61■■■□□ 2.97
LRFN4-202ENST00000393952 CDK19Q9BWU1 502 aa33.6■■■□□ 2.97
LRFN4-202ENST00000393952 DMRT2Q9Y5R5 561 aa33.6■■■□□ 2.97
LRFN4-202ENST00000393952 SRPK2P78362 688 aaKnown RBP33.6■■■□□ 2.97
LRFN4-202ENST00000393952 AEBP2Q6ZN18 517 aaPredicted RBP33.59■■■□□ 2.97
LRFN4-202ENST00000393952 PUS7Q96PZ0 661 aaKnown RBP33.59■■■□□ 2.97
LRFN4-202ENST00000393952 WASLO00401 505 aaPredicted RBP33.58■■■□□ 2.97
LRFN4-202ENST00000393952 RBM33Q96EV2 1170 aaKnown RBP33.57■■■□□ 2.96
LRFN4-202ENST00000393952 NALCNQ8IZF0 1738 aa33.56■■■□□ 2.96
LRFN4-202ENST00000393952 PROSER2Q86WR7 435 aaPredicted RBP33.55■■■□□ 2.96
LRFN4-202ENST00000393952 ZNF335Q9H4Z2 1342 aaPredicted RBP33.52■■■□□ 2.96
LRFN4-202ENST00000393952 ATAD2Q6PL18 1390 aa33.51■■■□□ 2.95
LRFN4-202ENST00000393952 ADGRL3Q9HAR2 1447 aa33.5■■■□□ 2.95
LRFN4-202ENST00000393952 TMC1Q8TDI8 760 aa33.48■■■□□ 2.95
LRFN4-202ENST00000393952 PANK3Q9H999 370 aa33.47■■■□□ 2.95
LRFN4-202ENST00000393952 CDC42BPGQ6DT37 1551 aa33.46■■■□□ 2.95
LRFN4-202ENST00000393952 SLC12A5Q9H2X9 1139 aa33.46■■■□□ 2.95
LRFN4-202ENST00000393952 C14orf37Q86TY3 774 aa33.45■■■□□ 2.95
LRFN4-202ENST00000393952 TMEM94Q12767 1356 aa33.45■■■□□ 2.95
LRFN4-202ENST00000393952 FMN2Q9NZ56 1722 aa33.44■■■□□ 2.94
LRFN4-202ENST00000393952 ATP7BP35670 1465 aa33.43■■■□□ 2.94
LRFN4-202ENST00000393952 PRR36Q9H6K5 1346 aa33.43■■■□□ 2.94
LRFN4-202ENST00000393952 NUDT16Q96DE0 195 aaKnown RBP33.43■■■□□ 2.94
LRFN4-202ENST00000393952 NINLQ9Y2I6 1382 aa33.41■■■□□ 2.94
LRFN4-202ENST00000393952 USP32Q8NFA0 1604 aa33.41■■■□□ 2.94
LRFN4-202ENST00000393952 XIRP1Q702N8 1843 aaKnown RBP33.4■■■□□ 2.94
LRFN4-202ENST00000393952 NUTM2FA1L443 756 aa33.4■■■□□ 2.94
LRFN4-202ENST00000393952 LRRC7Q96NW7 1537 aa33.39■■■□□ 2.94
LRFN4-202ENST00000393952 NCOA3Q9Y6Q9 1424 aa33.39■■■□□ 2.94
LRFN4-202ENST00000393952 TOPAZ1Q8N9V7 1692 aa33.38■■■□□ 2.93
LRFN4-202ENST00000393952 CABP1Q9NZU7 370 aa33.38■■■□□ 2.93
LRFN4-202ENST00000393952 PPIP5K1Q6PFW1 1433 aa33.37■■■□□ 2.93
LRFN4-202ENST00000393952 RGPD8O14715 1765 aaPredicted RBP33.37■■■□□ 2.93
LRFN4-202ENST00000393952 CCDC61Q9Y6R9 512 aa33.36■■■□□ 2.93
LRFN4-202ENST00000393952 PER1O15534 1290 aaPredicted RBP33.35■■■□□ 2.93
LRFN4-202ENST00000393952 ANKARQ7Z5J8 1434 aa33.34■■■□□ 2.93
LRFN4-202ENST00000393952 ANKRD36BQ8N2N9 1353 aa33.34■■■□□ 2.93
LRFN4-202ENST00000393952 CD163L1Q9NR16 1453 aa33.33■■■□□ 2.93
LRFN4-202ENST00000393952 C19orf44Q9H6X5 657 aa33.33■■■□□ 2.93
LRFN4-202ENST00000393952 ITSN1Q15811 1721 aa33.33■■■□□ 2.93
LRFN4-202ENST00000393952 CARD14Q9BXL6 1004 aa33.32■■■□□ 2.92
LRFN4-202ENST00000393952 MIER1Q8N108 512 aa33.31■■■□□ 2.92
LRFN4-202ENST00000393952 A0A1W2PP64 1363 aa33.3■■■□□ 2.92
LRFN4-202ENST00000393952 TERF2IPQ9NYB0 399 aa33.29■■■□□ 2.92
LRFN4-202ENST00000393952 ANP32CO43423 234 aa33.28■■■□□ 2.92
LRFN4-202ENST00000393952 DCCP43146 1447 aa33.27■■■□□ 2.92
LRFN4-202ENST00000393952 NSD3Q9BZ95 1437 aa33.27■■■□□ 2.92
LRFN4-202ENST00000393952 KNSTRNQ9Y448 316 aa33.26■■■□□ 2.92
LRFN4-202ENST00000393952 MSH6P52701 1360 aa33.26■■■□□ 2.92
LRFN4-202ENST00000393952 HDGFL2Q7Z4V5 671 aaPredicted RBP33.26■■■□□ 2.91
LRFN4-202ENST00000393952 LTBP4Q8N2S1 1624 aa33.25■■■□□ 2.91
LRFN4-202ENST00000393952 CNGB1Q14028 1251 aaPredicted RBP33.25■■■□□ 2.91
LRFN4-202ENST00000393952 PLEKHG3A1L390 1219 aa33.24■■■□□ 2.91
LRFN4-202ENST00000393952 AKAP12Q02952 1782 aa33.24■■■□□ 2.91
LRFN4-202ENST00000393952 ATF3P18847 181 aa33.23■■■□□ 2.91
LRFN4-202ENST00000393952 CPSF1Q10570 1443 aaKnown RBP33.22■■■□□ 2.91
LRFN4-202ENST00000393952 AMER1Q5JTC6 1135 aaPredicted RBP33.2■■■□□ 2.91
LRFN4-202ENST00000393952 PMFBP1Q8TBY8 1022 aa33.2■■■□□ 2.91
LRFN4-202ENST00000393952 MON2Q7Z3U7 1717 aa33.2■■■□□ 2.9
LRFN4-202ENST00000393952 ACEP12821 1306 aa33.19■■■□□ 2.9
LRFN4-202ENST00000393952 PRKRIP1Q9H875 184 aaPredicted RBP33.19■■■□□ 2.9
LRFN4-202ENST00000393952 KTN1Q86UP2 1357 aaKnown RBP33.19■■■□□ 2.9
LRFN4-202ENST00000393952 CADPS2Q86UW7 1296 aa33.18■■■□□ 2.9
LRFN4-202ENST00000393952 MST1RQ04912 1400 aa33.18■■■□□ 2.9
LRFN4-202ENST00000393952 C1orf167Q5SNV9 1468 aa33.18■■■□□ 2.9
LRFN4-202ENST00000393952 CC2D1BQ5T0F9 858 aaKnown RBP33.17■■■□□ 2.9
LRFN4-202ENST00000393952 PHF8Q9UPP1 1060 aa33.15■■■□□ 2.9
LRFN4-202ENST00000393952 POLR3AO14802 1390 aaPredicted RBP33.15■■■□□ 2.9
LRFN4-202ENST00000393952 ESCO1Q5FWF5 840 aa33.14■■■□□ 2.9
LRFN4-202ENST00000393952 ZNF692Q9BU19 519 aaPredicted RBP33.13■■■□□ 2.89
LRFN4-202ENST00000393952 NPC1L1Q9UHC9 1359 aa33.13■■■□□ 2.89
LRFN4-202ENST00000393952 NGDNQ8NEJ9 315 aaKnown RBP33.13■■■□□ 2.89
LRFN4-202ENST00000393952 ORAI2Q96SN7 254 aa33.12■■■□□ 2.89
LRFN4-202ENST00000393952 EDC4Q6P2E9 1401 aaKnown RBP33.12■■■□□ 2.89
LRFN4-202ENST00000393952 CGNL1Q0VF96 1302 aa33.11■■■□□ 2.89
LRFN4-202ENST00000393952 NRKQ7Z2Y5 1582 aa33.09■■■□□ 2.89
LRFN4-202ENST00000393952 USP6P35125 1406 aa33.09■■■□□ 2.89
LRFN4-202ENST00000393952 PARD3Q8TEW0 1356 aa33.09■■■□□ 2.89
LRFN4-202ENST00000393952 KIF20BQ96Q89 1820 aa33.07■■■□□ 2.89
LRFN4-202ENST00000393952 KIF1AQ12756 1690 aa33.07■■■□□ 2.88
LRFN4-202ENST00000393952 RALBP1Q15311 655 aa33.06■■■□□ 2.88
LRFN4-202ENST00000393952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.06■■■□□ 2.88
LRFN4-202ENST00000393952 NSD2O96028 1365 aa33.04■■■□□ 2.88
LRFN4-202ENST00000393952 SSH2Q76I76 1423 aa33.03■■■□□ 2.88
LRFN4-202ENST00000393952 FYB1O15117 783 aa33.02■■■□□ 2.88
LRFN4-202ENST00000393952 TTC21BQ7Z4L5 1316 aa33.01■■■□□ 2.88
LRFN4-202ENST00000393952 ANKRD26Q9UPS8 1709 aa33.01■■■□□ 2.87
LRFN4-202ENST00000393952 GGNBP2Q9H3C7 697 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms