RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PLEKHH1Q9ULM0 1364 aa27.21■■□□□ 1.95
PDLIM7-204ENST00000393546 DLC1Q96QB1 1528 aa27.2■■□□□ 1.94
PDLIM7-204ENST00000393546 HSPA1LP34931 641 aa27.18■■□□□ 1.94
PDLIM7-204ENST00000393546 SAFB2Q14151 953 aaKnown RBP eCLIP27.17■■□□□ 1.94
PDLIM7-204ENST00000393546 NBPF8Q3BBV2 869 aa27.16■■□□□ 1.94
PDLIM7-204ENST00000393546 TIMELESSQ9UNS1 1208 aa27.14■■□□□ 1.94
PDLIM7-204ENST00000393546 MST1RQ04912 1400 aa27.14■■□□□ 1.93
PDLIM7-204ENST00000393546 ROBO1Q9Y6N7 1651 aa27.14■■□□□ 1.93
PDLIM7-204ENST00000393546 TRPM1Q7Z4N2 1603 aa27.11■■□□□ 1.93
PDLIM7-204ENST00000393546 ROCK2O75116 1388 aaKnown RBP27.1■■□□□ 1.93
PDLIM7-204ENST00000393546 BRINP3Q76B58 766 aa27.1■■□□□ 1.93
PDLIM7-204ENST00000393546 CDC42BPGQ6DT37 1551 aa27.09■■□□□ 1.93
PDLIM7-204ENST00000393546 C1orf167Q5SNV9 1468 aa27.08■■□□□ 1.93
PDLIM7-204ENST00000393546 MINK1Q8N4C8 1332 aaPredicted RBP27.07■■□□□ 1.92
PDLIM7-204ENST00000393546 ARHGEF28Q8N1W1 1705 aaKnown RBP27.06■■□□□ 1.92
PDLIM7-204ENST00000393546 NUTM2FA1L443 756 aa27.05■■□□□ 1.92
PDLIM7-204ENST00000393546 HIRIP3Q9BW71 556 aaPredicted RBP27.05■■□□□ 1.92
PDLIM7-204ENST00000393546 ORAI2Q96SN7 254 aa27.03■■□□□ 1.92
PDLIM7-204ENST00000393546 ESCO1Q5FWF5 840 aa27.02■■□□□ 1.92
PDLIM7-204ENST00000393546 CARD11Q9BXL7 1154 aa27.02■■□□□ 1.92
PDLIM7-204ENST00000393546 GPRASP1Q5JY77 1395 aa27.01■■□□□ 1.91
PDLIM7-204ENST00000393546 CENPJQ9HC77 1338 aaPredicted RBP27.01■■□□□ 1.91
PDLIM7-204ENST00000393546 WASLO00401 505 aaPredicted RBP27■■□□□ 1.91
PDLIM7-204ENST00000393546 RALGAPBQ86X10 1494 aa27■■□□□ 1.91
PDLIM7-204ENST00000393546 FMN2Q9NZ56 1722 aa26.99■■□□□ 1.91
PDLIM7-204ENST00000393546 PHLPP1O60346 1717 aa26.98■■□□□ 1.91
PDLIM7-204ENST00000393546 ADGRB2O60241 1585 aa26.97■■□□□ 1.91
PDLIM7-204ENST00000393546 EIF3AQ14152 1382 aaKnown RBP26.97■■□□□ 1.91
PDLIM7-204ENST00000393546 AHDC1Q5TGY3 1603 aaPredicted RBP26.96■■□□□ 1.91
PDLIM7-204ENST00000393546 DDX17Q92841 729 aaKnown RBP26.94■■□□□ 1.9
PDLIM7-204ENST00000393546 CDK19Q9BWU1 502 aa26.93■■□□□ 1.9
PDLIM7-204ENST00000393546 ANKARQ7Z5J8 1434 aa26.92■■□□□ 1.9
PDLIM7-204ENST00000393546 NHSL1Q5SYE7 1610 aa26.9■■□□□ 1.9
PDLIM7-204ENST00000393546 DISP3Q9P2K9 1392 aa26.9■■□□□ 1.9
PDLIM7-204ENST00000393546 FOXO3O43524 673 aa26.9■■□□□ 1.9
PDLIM7-204ENST00000393546 PHF8Q9UPP1 1060 aa26.9■■□□□ 1.9
PDLIM7-204ENST00000393546 NPHP3Q7Z494 1330 aa26.9■■□□□ 1.9
PDLIM7-204ENST00000393546 LRRC59Q96AG4 307 aaKnown RBP26.89■■□□□ 1.9
PDLIM7-204ENST00000393546 COL16A1Q07092 1604 aaPredicted RBP26.89■■□□□ 1.9
PDLIM7-204ENST00000393546 RGPD8O14715 1765 aaPredicted RBP26.89■■□□□ 1.89
PDLIM7-204ENST00000393546 TULP4Q9NRJ4 1543 aa26.88■■□□□ 1.89
PDLIM7-204ENST00000393546 QRICH2Q9H0J4 1663 aa26.88■■□□□ 1.89
PDLIM7-204ENST00000393546 JCADQ9P266 1359 aa26.87■■□□□ 1.89
PDLIM7-204ENST00000393546 NUDT16Q96DE0 195 aaKnown RBP26.87■■□□□ 1.89
PDLIM7-204ENST00000393546 PRR36Q9H6K5 1346 aa26.87■■□□□ 1.89
PDLIM7-204ENST00000393546 SOS2Q07890 1332 aaPredicted RBP26.86■■□□□ 1.89
PDLIM7-204ENST00000393546 SOCS7O14512 581 aa26.85■■□□□ 1.89
PDLIM7-204ENST00000393546 SRPK2P78362 688 aaKnown RBP26.85■■□□□ 1.89
PDLIM7-204ENST00000393546 ILDR2Q71H61 639 aa26.85■■□□□ 1.89
PDLIM7-204ENST00000393546 EVC2Q86UK5 1308 aa26.85■■□□□ 1.89
PDLIM7-204ENST00000393546 USP32Q8NFA0 1604 aa26.84■■□□□ 1.89
PDLIM7-204ENST00000393546 PMFBP1Q8TBY8 1022 aa26.84■■□□□ 1.89
PDLIM7-204ENST00000393546 KIF1AQ12756 1690 aa26.84■■□□□ 1.89
PDLIM7-204ENST00000393546 CCDC61Q9Y6R9 512 aa26.82■■□□□ 1.88
PDLIM7-204ENST00000393546 XPCQ01831 940 aaPredicted RBP26.81■■□□□ 1.88
PDLIM7-204ENST00000393546 PSME1Q06323 249 aa26.81■■□□□ 1.88
PDLIM7-204ENST00000393546 KRT28Q7Z3Y7 464 aa26.81■■□□□ 1.88
PDLIM7-204ENST00000393546 CABP2Q9NPB3 220 aa26.81■■□□□ 1.88
PDLIM7-204ENST00000393546 NGDNQ8NEJ9 315 aaKnown RBP26.79■■□□□ 1.88
PDLIM7-204ENST00000393546 ATP7BP35670 1465 aa26.79■■□□□ 1.88
PDLIM7-204ENST00000393546 ST20-MTHFSA0A0A6YYL1 179 aa26.78■■□□□ 1.88
PDLIM7-204ENST00000393546 SBNO2Q9Y2G9 1366 aa26.78■■□□□ 1.88
PDLIM7-204ENST00000393546 SLC24A1O60721 1099 aa26.77■■□□□ 1.88
PDLIM7-204ENST00000393546 PXDNQ92626 1479 aa26.76■■□□□ 1.87
PDLIM7-204ENST00000393546 SPATA31A6Q5VVP1 1343 aa26.76■■□□□ 1.87
PDLIM7-204ENST00000393546 ITSN1Q15811 1721 aa26.76■■□□□ 1.87
PDLIM7-204ENST00000393546 USP47Q96K76 1375 aa26.74■■□□□ 1.87
PDLIM7-204ENST00000393546 SHPRHQ149N8 1683 aa26.74■■□□□ 1.87
PDLIM7-204ENST00000393546 PLEKHG3A1L390 1219 aa26.74■■□□□ 1.87
PDLIM7-204ENST00000393546 PNPLA6Q8IY17 1366 aa26.72■■□□□ 1.87
PDLIM7-204ENST00000393546 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
PDLIM7-204ENST00000393546 SPATA31A3Q5VYP0 1347 aa26.7■■□□□ 1.87
PDLIM7-204ENST00000393546 NUTM2BA6NNL0 878 aaPredicted RBP26.7■■□□□ 1.86
PDLIM7-204ENST00000393546 NUTM2EB1AL46 878 aaPredicted RBP26.7■■□□□ 1.86
PDLIM7-204ENST00000393546 NUTM2AQ8IVF1 878 aaPredicted RBP26.7■■□□□ 1.86
PDLIM7-204ENST00000393546 TESK2Q96S53 571 aa26.7■■□□□ 1.86
PDLIM7-204ENST00000393546 PPIP5K1Q6PFW1 1433 aa26.7■■□□□ 1.86
PDLIM7-204ENST00000393546 ACEP12821 1306 aa26.69■■□□□ 1.86
PDLIM7-204ENST00000393546 CABP1Q9NZU7 370 aa26.69■■□□□ 1.86
PDLIM7-204ENST00000393546 SBNO1A3KN83 1393 aa26.69■■□□□ 1.86
PDLIM7-204ENST00000393546 TOPAZ1Q8N9V7 1692 aa26.68■■□□□ 1.86
PDLIM7-204ENST00000393546 POLR3AO14802 1390 aaPredicted RBP26.67■■□□□ 1.86
PDLIM7-204ENST00000393546 ATAD2Q6PL18 1390 aa26.67■■□□□ 1.86
PDLIM7-204ENST00000393546 LMOD2Q6P5Q4 547 aa26.66■■□□□ 1.86
PDLIM7-204ENST00000393546 PUS7Q96PZ0 661 aaKnown RBP26.66■■□□□ 1.86
PDLIM7-204ENST00000393546 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
PDLIM7-204ENST00000393546 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
PDLIM7-204ENST00000393546 TNS3Q68CZ2 1445 aa26.65■■□□□ 1.86
PDLIM7-204ENST00000393546 PAK3O75914 559 aaPredicted RBP26.64■■□□□ 1.86
PDLIM7-204ENST00000393546 TMF1P82094 1093 aa26.64■■□□□ 1.86
PDLIM7-204ENST00000393546 EIF4G2P78344 907 aaKnown RBP eCLIP26.63■■□□□ 1.85
PDLIM7-204ENST00000393546 ARHGEF10O15013 1369 aa26.61■■□□□ 1.85
PDLIM7-204ENST00000393546 LRP6O75581 1613 aa26.6■■□□□ 1.85
PDLIM7-204ENST00000393546 COL22A1Q8NFW1 1626 aaPredicted RBP26.59■■□□□ 1.85
PDLIM7-204ENST00000393546 TMC1Q8TDI8 760 aa26.59■■□□□ 1.85
PDLIM7-204ENST00000393546 ZNF692Q9BU19 519 aaPredicted RBP26.59■■□□□ 1.85
PDLIM7-204ENST00000393546 TRPM3Q9HCF6 1732 aaPredicted RBP26.58■■□□□ 1.85
PDLIM7-204ENST00000393546 ADAMTS2O95450 1211 aa26.57■■□□□ 1.84
PDLIM7-204ENST00000393546 CDCA8Q53HL2 280 aa26.57■■□□□ 1.84
PDLIM7-204ENST00000393546 HSPA5P11021 654 aaKnown RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms