RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 FAM114A2Q9NRY5 505 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 CCDC173Q0VFZ6 552 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 NUP133Q8WUM0 1156 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 TSPY26PQ9H489 355 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 RRP7BPQ9NSQ0 103 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 GOLIM4O00461 696 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 SLC4A2P04920 1241 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 SLC4A10Q6U841 1118 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 CEP57Q86XR8 500 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 KCNH8Q96L42 1107 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 TIGD1Q96MW7 591 aa3.93□□□□□ -1.78
PHF3-202ENST00000393387 NUCB2P80303 420 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 DAAM2Q86T65 1068 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 EXOC6Q8TAG9 804 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 SCLT1Q96NL6 688 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 NAP1L3Q99457 506 aaPredicted RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 TRAK2O60296 914 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 MS4A1P11836 297 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 FAM161AQ3B820 660 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 LCA5Q86VQ0 697 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 KLHL34Q8N239 644 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 MICALL1Q8N3F8 863 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 DDX23Q9BUQ8 820 aaKnown RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 LRRFIP2Q9Y608 721 aaKnown RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 AKAP17AQ02040 695 aaKnown RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 CCDC181Q5TID7 509 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 SEPT14Q6ZU15 432 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 TTC16Q8NEE8 873 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 EIF3JO75822 258 aaKnown RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 NEBLO76041 1014 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 APBB1IPQ7Z5R6 666 aaPredicted RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 BANK1Q8NDB2 785 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 CCDC97Q96F63 343 aaPredicted RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 RSPH14Q9UHP6 348 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 TSPY4P0CV99 314 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 TSPY10P0CW01 314 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 CEBPZQ03701 1054 aaKnown RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 BMS1Q14692 1282 aaKnown RBP3.92□□□□□ -1.78
PHF3-202ENST00000393387 ANKRD20A12PQ8NF67 263 aa3.92□□□□□ -1.78
PHF3-202ENST00000393387 PRPF40AO75400 957 aaKnown RBP3.91□□□□□ -1.78
PHF3-202ENST00000393387 SSBP05455 408 aaKnown RBP eCLIP3.91□□□□□ -1.78
PHF3-202ENST00000393387 ERCC3P19447 782 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 SAMD1Q6SPF0 538 aaPredicted RBP3.91□□□□□ -1.78
PHF3-202ENST00000393387 C10orf67Q8IYJ2 551 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 EPS15P42566 896 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 FAM160A1Q05DH4 1040 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 LRRC43Q8N309 656 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 WHAMMQ8TF30 809 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 ZMAT2Q96NC0 199 aaKnown RBP3.91□□□□□ -1.78
PHF3-202ENST00000393387 CNPY4Q8N129 248 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 CARD11Q9BXL7 1154 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 GOPCQ9HD26 462 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 TRIM29Q14134 588 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 CTR9Q6PD62 1173 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 SMARCE1Q969G3 411 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 SLC26A8Q96RN1 970 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 FRMD3A2A2Y4 597 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 GOLGA6L9A6NEM1 432 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 DNA2P51530 1060 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 IKQ13123 557 aaPredicted RBP3.91□□□□□ -1.78
PHF3-202ENST00000393387 TTC31Q49AM3 519 aaPredicted RBP3.91□□□□□ -1.78
PHF3-202ENST00000393387 CCDC91Q7Z6B0 441 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 STK31Q9BXU1 1019 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 CHMP5Q9NZZ3 219 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 DHX8Q14562 1220 aaKnown RBP3.91□□□□□ -1.78
PHF3-202ENST00000393387 MIPOL1Q8TD10 442 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 CFAP57Q96MR6 1250 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 CRBNQ96SW2 442 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 BCL2L13Q9BXK5 485 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 GRPEL1Q9HAV7 217 aa3.91□□□□□ -1.78
PHF3-202ENST00000393387 OFD1O75665 1012 aa3.9□□□□□ -1.78
PHF3-202ENST00000393387 RFC1P35251 1148 aaPredicted RBP3.9□□□□□ -1.78
PHF3-202ENST00000393387 SMC1AQ14683 1233 aaKnown RBP3.9□□□□□ -1.78
PHF3-202ENST00000393387 ANKRD45Q5TZF3 282 aa3.9□□□□□ -1.78
PHF3-202ENST00000393387 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.9□□□□□ -1.78
PHF3-202ENST00000393387 EZRP15311 586 aaKnown RBP3.9□□□□□ -1.78
PHF3-202ENST00000393387 LIG1P18858 919 aa3.9□□□□□ -1.78
PHF3-202ENST00000393387 MTMR7Q9Y216 660 aa3.9□□□□□ -1.78
PHF3-202ENST00000393387 ERLIN1O75477 346 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 OLFM4Q6UX06 510 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 GIGYF2Q6Y7W6 1299 aaKnown RBP3.9□□□□□ -1.79
PHF3-202ENST00000393387 SMC4Q9NTJ3 1288 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 NUDCQ9Y266 331 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 ERLIN2O94905 339 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 FAM177BA6PVY3 158 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 PDCL3Q9H2J4 239 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 HYPKQ9NX55 129 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 TCEAL9Q9UHQ7 104 aa3.9□□□□□ -1.79
PHF3-202ENST00000393387 PPARDQ03181 441 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 PSMD1Q99460 953 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 TCHPQ9BT92 498 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 KIF3CO14782 793 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 BRD2P25440 801 aaKnown RBP3.89□□□□□ -1.79
PHF3-202ENST00000393387 CEP120Q8N960 986 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 PPP1R1BQ9UD71 204 aaPredicted RBP3.89□□□□□ -1.79
PHF3-202ENST00000393387 FEZ2Q9UHY8 353 aaPredicted RBP3.89□□□□□ -1.79
PHF3-202ENST00000393387 TTC36A6NLP5 189 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 GPATCH3Q96I76 525 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 RNF20Q5VTR2 975 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 PRPF31Q8WWY3 499 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms