RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
CASP4-201ENST00000393150 ATF3P18847 181 aa12.38□□□□□ -0.43
CASP4-201ENST00000393150 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
CASP4-201ENST00000393150 SLIT1O75093 1534 aa12.38□□□□□ -0.43
CASP4-201ENST00000393150 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
CASP4-201ENST00000393150 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
CASP4-201ENST00000393150 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
CASP4-201ENST00000393150 CFAP65Q6ZU64 1925 aaKnown RBP12.36□□□□□ -0.43
CASP4-201ENST00000393150 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
CASP4-201ENST00000393150 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
CASP4-201ENST00000393150 UBR1Q8IWV7 1749 aa12.35□□□□□ -0.43
CASP4-201ENST00000393150 ARHGEF5Q12774 1597 aa12.35□□□□□ -0.43
CASP4-201ENST00000393150 FGD6Q6ZV73 1430 aa12.35□□□□□ -0.43
CASP4-201ENST00000393150 NUTM2BA6NNL0 878 aaPredicted RBP12.35□□□□□ -0.43
CASP4-201ENST00000393150 NUTM2EB1AL46 878 aaPredicted RBP12.35□□□□□ -0.43
CASP4-201ENST00000393150 NUTM2AQ8IVF1 878 aaPredicted RBP12.35□□□□□ -0.43
CASP4-201ENST00000393150 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
CASP4-201ENST00000393150 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
CASP4-201ENST00000393150 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
CASP4-201ENST00000393150 SLC52A1Q9NWF4 448 aa12.34□□□□□ -0.43
CASP4-201ENST00000393150 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
CASP4-201ENST00000393150 PRDM15P57071 1507 aaPredicted RBP12.33□□□□□ -0.44
CASP4-201ENST00000393150 PHLPP1O60346 1717 aa12.33□□□□□ -0.44
CASP4-201ENST00000393150 IDI1Q13907 227 aa12.33□□□□□ -0.44
CASP4-201ENST00000393150 NGLY1Q96IV0 654 aa12.33□□□□□ -0.44
CASP4-201ENST00000393150 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
CASP4-201ENST00000393150 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
CASP4-201ENST00000393150 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
CASP4-201ENST00000393150 SOX12O15370 315 aa12.32□□□□□ -0.44
CASP4-201ENST00000393150 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
CASP4-201ENST00000393150 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
CASP4-201ENST00000393150 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
CASP4-201ENST00000393150 EFCAB6Q5THR3 1501 aa12.31□□□□□ -0.44
CASP4-201ENST00000393150 DUOX2Q9NRD8 1548 aa12.31□□□□□ -0.44
CASP4-201ENST00000393150 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
CASP4-201ENST00000393150 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
CASP4-201ENST00000393150 NCOA3Q9Y6Q9 1424 aa12.3□□□□□ -0.44
CASP4-201ENST00000393150 PPP1R37O75864 691 aa12.3□□□□□ -0.44
CASP4-201ENST00000393150 RBM6P78332 1123 aaKnown RBP12.3□□□□□ -0.44
CASP4-201ENST00000393150 CDK12Q9NYV4 1490 aaPredicted RBP12.29□□□□□ -0.44
CASP4-201ENST00000393150 XIRP1Q702N8 1843 aaKnown RBP12.29□□□□□ -0.44
CASP4-201ENST00000393150 TIE1P35590 1138 aa12.29□□□□□ -0.44
CASP4-201ENST00000393150 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
CASP4-201ENST00000393150 KIF15Q9NS87 1388 aa12.29□□□□□ -0.44
CASP4-201ENST00000393150 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
CASP4-201ENST00000393150 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
CASP4-201ENST00000393150 LRRC59Q96AG4 307 aaKnown RBP12.28□□□□□ -0.44
CASP4-201ENST00000393150 AFF2P51816 1311 aa12.28□□□□□ -0.44
CASP4-201ENST00000393150 NLRP6P59044 892 aa12.27□□□□□ -0.45
CASP4-201ENST00000393150 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
CASP4-201ENST00000393150 ERBINQ96RT1 1412 aa12.27□□□□□ -0.45
CASP4-201ENST00000393150 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.45
CASP4-201ENST00000393150 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
CASP4-201ENST00000393150 CEP152O94986 1710 aa12.26□□□□□ -0.45
CASP4-201ENST00000393150 MAST1Q9Y2H9 1570 aa12.26□□□□□ -0.45
CASP4-201ENST00000393150 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
CASP4-201ENST00000393150 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
CASP4-201ENST00000393150 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
CASP4-201ENST00000393150 PIK3C2BO00750 1634 aa12.25□□□□□ -0.45
CASP4-201ENST00000393150 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
CASP4-201ENST00000393150 KDM5AP29375 1690 aaKnown RBP12.23□□□□□ -0.45
CASP4-201ENST00000393150 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
CASP4-201ENST00000393150 TET3O43151 1660 aa12.22□□□□□ -0.45
CASP4-201ENST00000393150 ANKRD30AQ9BXX3 1397 aa12.22□□□□□ -0.45
CASP4-201ENST00000393150 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
CASP4-201ENST00000393150 CLCN6P51797 869 aa12.22□□□□□ -0.45
CASP4-201ENST00000393150 LRP6O75581 1613 aa12.22□□□□□ -0.45
CASP4-201ENST00000393150 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.45
CASP4-201ENST00000393150 BRINP3Q76B58 766 aa12.21□□□□□ -0.45
CASP4-201ENST00000393150 COL16A1Q07092 1604 aaPredicted RBP12.21□□□□□ -0.46
CASP4-201ENST00000393150 NWD1Q149M9 1564 aa12.21□□□□□ -0.46
CASP4-201ENST00000393150 PIK3R4Q99570 1358 aa12.21□□□□□ -0.46
CASP4-201ENST00000393150 MROH1Q8NDA8 1641 aa12.2□□□□□ -0.46
CASP4-201ENST00000393150 TRPC5Q9UL62 973 aaPredicted RBP12.19□□□□□ -0.46
CASP4-201ENST00000393150 AMOTL2Q9Y2J4 779 aa12.19□□□□□ -0.46
CASP4-201ENST00000393150 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
CASP4-201ENST00000393150 ADGRB3O60242 1522 aa12.19□□□□□ -0.46
CASP4-201ENST00000393150 AHDC1Q5TGY3 1603 aaPredicted RBP12.19□□□□□ -0.46
CASP4-201ENST00000393150 ADAMTS2O95450 1211 aa12.18□□□□□ -0.46
CASP4-201ENST00000393150 CHIC2Q9UKJ5 165 aa12.18□□□□□ -0.46
CASP4-201ENST00000393150 SHPRHQ149N8 1683 aa12.18□□□□□ -0.46
CASP4-201ENST00000393150 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
CASP4-201ENST00000393150 USP21Q9UK80 565 aa12.17□□□□□ -0.46
CASP4-201ENST00000393150 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
CASP4-201ENST00000393150 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
CASP4-201ENST00000393150 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
CASP4-201ENST00000393150 NOS1P29475 1434 aa12.16□□□□□ -0.46
CASP4-201ENST00000393150 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
CASP4-201ENST00000393150 RGS12O14924 1447 aa12.15□□□□□ -0.46
CASP4-201ENST00000393150 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
CASP4-201ENST00000393150 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
CASP4-201ENST00000393150 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
CASP4-201ENST00000393150 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
CASP4-201ENST00000393150 DCCP43146 1447 aa12.14□□□□□ -0.47
CASP4-201ENST00000393150 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
CASP4-201ENST00000393150 ABCC5O15440 1437 aa12.13□□□□□ -0.47
CASP4-201ENST00000393150 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
CASP4-201ENST00000393150 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
CASP4-201ENST00000393150 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
CASP4-201ENST00000393150 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms