RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 TXNDC2Q86VQ3 553 aa15.52■□□□□ 0.07
CLTC-202ENST00000393043 GAS2L2Q8NHY3 880 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 NINLQ9Y2I6 1382 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 INTS3Q68E01 1043 aaKnown RBP15.51■□□□□ 0.07
CLTC-202ENST00000393043 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 GTF2E1P29083 439 aaPredicted RBP15.51■□□□□ 0.07
CLTC-202ENST00000393043 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 WDR63Q8IWG1 891 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
CLTC-202ENST00000393043 TULP1O00294 542 aaPredicted RBP15.5■□□□□ 0.07
CLTC-202ENST00000393043 IFIT2P09913 472 aaKnown RBP15.5■□□□□ 0.07
CLTC-202ENST00000393043 ZKSCAN1P17029 563 aaPredicted RBP15.5■□□□□ 0.07
CLTC-202ENST00000393043 CHMP5Q9NZZ3 219 aa15.5■□□□□ 0.07
CLTC-202ENST00000393043 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
CLTC-202ENST00000393043 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
CLTC-202ENST00000393043 GSE1Q14687 1217 aa15.49■□□□□ 0.07
CLTC-202ENST00000393043 DDX49Q9Y6V7 483 aaKnown RBP15.49■□□□□ 0.07
CLTC-202ENST00000393043 ATF3P18847 181 aa15.49■□□□□ 0.07
CLTC-202ENST00000393043 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
CLTC-202ENST00000393043 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
CLTC-202ENST00000393043 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.073e-8■■■■□ 21.8
CLTC-202ENST00000393043 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
CLTC-202ENST00000393043 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
CLTC-202ENST00000393043 EXOSC9Q06265 439 aaKnown RBP15.48■□□□□ 0.07
CLTC-202ENST00000393043 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
CLTC-202ENST00000393043 C22orf23Q9BZE7 217 aa15.47■□□□□ 0.07
CLTC-202ENST00000393043 CABP1Q9NZU7 370 aa15.47■□□□□ 0.07
CLTC-202ENST00000393043 FRAT2O75474 233 aaPredicted RBP15.46■□□□□ 0.07
CLTC-202ENST00000393043 H3BQV1 296 aa15.46■□□□□ 0.06
CLTC-202ENST00000393043 ERC2O15083 957 aa15.46■□□□□ 0.06
CLTC-202ENST00000393043 GNAI3P08754 354 aa15.46■□□□□ 0.06
CLTC-202ENST00000393043 IFFO2Q5TF58 517 aa15.46■□□□□ 0.06
CLTC-202ENST00000393043 FAM184AQ8NB25 1140 aa15.46■□□□□ 0.06
CLTC-202ENST00000393043 RTEL1-TNFRSF6BF6WH68 1400 aa15.46■□□□□ 0.06
CLTC-202ENST00000393043 RPRD2Q5VT52 1461 aaKnown RBP15.45■□□□□ 0.06
CLTC-202ENST00000393043 CCDC30Q5VVM6 783 aa15.45■□□□□ 0.06
CLTC-202ENST00000393043 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
CLTC-202ENST00000393043 RNF20Q5VTR2 975 aa15.45■□□□□ 0.06
CLTC-202ENST00000393043 CDC45O75419 566 aa15.45■□□□□ 0.06
CLTC-202ENST00000393043 SF3A1Q15459 793 aaKnown RBP15.45■□□□□ 0.06
CLTC-202ENST00000393043 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
CLTC-202ENST00000393043 ABTB2Q8N961 1025 aa15.44■□□□□ 0.06
CLTC-202ENST00000393043 ANO2Q9NQ90 1003 aa15.44■□□□□ 0.06
CLTC-202ENST00000393043 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
CLTC-202ENST00000393043 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
CLTC-202ENST00000393043 FOXD4L5Q5VV16 416 aaPredicted RBP15.44■□□□□ 0.06
CLTC-202ENST00000393043 FOXD4L4Q8WXT5 416 aaPredicted RBP15.44■□□□□ 0.06
CLTC-202ENST00000393043 NUCB2P80303 420 aa15.43■□□□□ 0.06
CLTC-202ENST00000393043 GCC1Q96CN9 775 aa15.43■□□□□ 0.06
CLTC-202ENST00000393043 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
CLTC-202ENST00000393043 CPLX2Q6PUV4 134 aaKnown RBP15.42■□□□□ 0.06
CLTC-202ENST00000393043 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
CLTC-202ENST00000393043 NLRP2Q9NX02 1062 aa15.42■□□□□ 0.06
CLTC-202ENST00000393043 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
CLTC-202ENST00000393043 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
CLTC-202ENST00000393043 NUTM2GQ5VZR2 741 aa15.41■□□□□ 0.06
CLTC-202ENST00000393043 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
CLTC-202ENST00000393043 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
CLTC-202ENST00000393043 ZNF428Q96B54 188 aa15.41■□□□□ 0.06
CLTC-202ENST00000393043 POGZQ7Z3K3 1410 aa15.4■□□□□ 0.06
CLTC-202ENST00000393043 NSD3Q9BZ95 1437 aa15.4■□□□□ 0.06
CLTC-202ENST00000393043 BCAR3O75815 825 aa15.4■□□□□ 0.06
CLTC-202ENST00000393043 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
CLTC-202ENST00000393043 G3V3G9 751 aa15.4■□□□□ 0.06
CLTC-202ENST00000393043 DCAF8Q5TAQ9 597 aa15.4■□□□□ 0.06
CLTC-202ENST00000393043 FCHSD2O94868 740 aa15.39■□□□□ 0.05
CLTC-202ENST00000393043 SYNE3Q6ZMZ3 975 aa15.39■□□□□ 0.05
CLTC-202ENST00000393043 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
CLTC-202ENST00000393043 NOB1Q9ULX3 412 aaKnown RBP15.39■□□□□ 0.05
CLTC-202ENST00000393043 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
CLTC-202ENST00000393043 ESCO1Q5FWF5 840 aa15.38■□□□□ 0.05
CLTC-202ENST00000393043 C11orf95C9JLR9 678 aaPredicted RBP15.38■□□□□ 0.05
CLTC-202ENST00000393043 RASSF8Q8NHQ8 419 aa15.38■□□□□ 0.05
CLTC-202ENST00000393043 ATF7IPQ6VMQ6 1270 aa15.37■□□□□ 0.05
CLTC-202ENST00000393043 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
CLTC-202ENST00000393043 AKAP17AQ02040 695 aaKnown RBP15.37■□□□□ 0.05
CLTC-202ENST00000393043 SLFN5Q08AF3 891 aa15.37■□□□□ 0.05
CLTC-202ENST00000393043 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
CLTC-202ENST00000393043 MVPQ14764 893 aaKnown RBP15.36■□□□□ 0.05
CLTC-202ENST00000393043 CLASRPQ8N2M8 674 aaKnown RBP15.36■□□□□ 0.05
CLTC-202ENST00000393043 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
CLTC-202ENST00000393043 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
CLTC-202ENST00000393043 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
CLTC-202ENST00000393043 CCT4P50991 539 aaKnown RBP15.35■□□□□ 0.05
CLTC-202ENST00000393043 GNAI2P04899 355 aa15.35■□□□□ 0.05
CLTC-202ENST00000393043 TRDNQ13061 729 aa15.35■□□□□ 0.05
CLTC-202ENST00000393043 WWC1Q8IX03 1113 aa15.35■□□□□ 0.05
CLTC-202ENST00000393043 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
CLTC-202ENST00000393043 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
CLTC-202ENST00000393043 AIMP1Q12904 312 aaKnown RBP15.34■□□□□ 0.05
CLTC-202ENST00000393043 RAPGEF6Q8TEU7 1601 aa15.34■□□□□ 0.05
CLTC-202ENST00000393043 GOLGA6L19H0YKK7 550 aa15.34■□□□□ 0.05
CLTC-202ENST00000393043 BACH2Q9BYV9 841 aa15.34■□□□□ 0.05
CLTC-202ENST00000393043 SCAF11Q99590 1463 aaKnown RBP15.34■□□□□ 0.05
CLTC-202ENST00000393043 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.05
CLTC-202ENST00000393043 CPLX1O14810 134 aa15.33■□□□□ 0.04
CLTC-202ENST00000393043 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
CLTC-202ENST00000393043 SYTL4Q96C24 671 aaPredicted RBP15.33■□□□□ 0.04
CLTC-202ENST00000393043 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms