RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
LCA5-202ENST00000392959 NCOA2Q15596 1464 aa15.88■□□□□ 0.13
LCA5-202ENST00000392959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.88■□□□□ 0.13
LCA5-202ENST00000392959 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
LCA5-202ENST00000392959 PNISRQ8TF01 805 aaKnown RBP15.88■□□□□ 0.13
LCA5-202ENST00000392959 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
LCA5-202ENST00000392959 MBD3O95983 291 aa15.87■□□□□ 0.13
LCA5-202ENST00000392959 AKNAQ7Z591 1439 aa15.87■□□□□ 0.13
LCA5-202ENST00000392959 CCDC39Q9UFE4 941 aa15.87■□□□□ 0.13
LCA5-202ENST00000392959 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
LCA5-202ENST00000392959 CAVIN1Q6NZI2 390 aaKnown RBP15.86■□□□□ 0.13
LCA5-202ENST00000392959 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
LCA5-202ENST00000392959 UBTFL1P0CB47 393 aaPredicted RBP15.86■□□□□ 0.13
LCA5-202ENST00000392959 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
LCA5-202ENST00000392959 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
LCA5-202ENST00000392959 CABP2Q9NPB3 220 aa15.86■□□□□ 0.13
LCA5-202ENST00000392959 NEK4P51957 841 aa15.85■□□□□ 0.13
LCA5-202ENST00000392959 TMEM132EQ6IEE7 984 aa15.85■□□□□ 0.13
LCA5-202ENST00000392959 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.85■□□□□ 0.13
LCA5-202ENST00000392959 CCDC47Q96A33 483 aaKnown RBP15.85■□□□□ 0.13
LCA5-202ENST00000392959 SETQ01105 290 aaPredicted RBP15.85■□□□□ 0.13
LCA5-202ENST00000392959 PCMTD1Q96MG8 357 aaPredicted RBP15.85■□□□□ 0.13
LCA5-202ENST00000392959 RABEP1Q15276 862 aa15.84■□□□□ 0.13
LCA5-202ENST00000392959 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
LCA5-202ENST00000392959 GNAI3P08754 354 aa15.84■□□□□ 0.13
LCA5-202ENST00000392959 NBPF8Q3BBV2 869 aa15.84■□□□□ 0.13
LCA5-202ENST00000392959 MAP7D2Q96T17 732 aa15.84■□□□□ 0.13
LCA5-202ENST00000392959 FBXW7Q969H0 707 aa15.84■□□□□ 0.13
LCA5-202ENST00000392959 MCM2P49736 904 aa15.83■□□□□ 0.13
LCA5-202ENST00000392959 MNS1Q8NEH6 495 aa15.83■□□□□ 0.13
LCA5-202ENST00000392959 BCAR3O75815 825 aa15.83■□□□□ 0.12
LCA5-202ENST00000392959 MTERF4Q7Z6M4 381 aaKnown RBP15.83■□□□□ 0.12
LCA5-202ENST00000392959 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.12
LCA5-202ENST00000392959 ARGLU1Q9NWB6 273 aaPredicted RBP15.83■□□□□ 0.12
LCA5-202ENST00000392959 NFXL1Q6ZNB6 911 aa15.83■□□□□ 0.12
LCA5-202ENST00000392959 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.12
LCA5-202ENST00000392959 SDF4Q9BRK5 362 aa15.83■□□□□ 0.12
LCA5-202ENST00000392959 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
LCA5-202ENST00000392959 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
LCA5-202ENST00000392959 GCC1Q96CN9 775 aa15.82■□□□□ 0.12
LCA5-202ENST00000392959 SAFBQ15424 915 aaKnown RBP eCLIP15.82■□□□□ 0.12
LCA5-202ENST00000392959 RALYLQ86SE5 291 aaKnown RBP15.82■□□□□ 0.12
LCA5-202ENST00000392959 PRPF40AO75400 957 aaKnown RBP15.82■□□□□ 0.12
LCA5-202ENST00000392959 FOSBP53539 338 aa15.82■□□□□ 0.12
LCA5-202ENST00000392959 SURF6O75683 361 aaKnown RBP15.81■□□□□ 0.12
LCA5-202ENST00000392959 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
LCA5-202ENST00000392959 PSMA5P28066 241 aa15.81■□□□□ 0.12
LCA5-202ENST00000392959 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
LCA5-202ENST00000392959 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
LCA5-202ENST00000392959 PSME1Q06323 249 aa15.8■□□□□ 0.12
LCA5-202ENST00000392959 NEUROD6Q96NK8 337 aa15.8■□□□□ 0.12
LCA5-202ENST00000392959 AMOTL1Q8IY63 956 aa15.8■□□□□ 0.12
LCA5-202ENST00000392959 NAT10Q9H0A0 1025 aaKnown RBP15.8■□□□□ 0.12
LCA5-202ENST00000392959 EVA1CP58658 441 aa15.8■□□□□ 0.12
LCA5-202ENST00000392959 RIC3Q7Z5B4 369 aa15.8■□□□□ 0.12
LCA5-202ENST00000392959 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
LCA5-202ENST00000392959 SMG6Q86US8 1419 aaKnown RBP15.79■□□□□ 0.12
LCA5-202ENST00000392959 ERICH2A1L162 156 aa15.79■□□□□ 0.12
LCA5-202ENST00000392959 LETM1O95202 739 aaPredicted RBP15.79■□□□□ 0.12
LCA5-202ENST00000392959 PDCP20941 246 aa15.79■□□□□ 0.12
LCA5-202ENST00000392959 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
LCA5-202ENST00000392959 CCDC184Q52MB2 194 aa15.79■□□□□ 0.12
LCA5-202ENST00000392959 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
LCA5-202ENST00000392959 CCDC173Q0VFZ6 552 aa15.79■□□□□ 0.12
LCA5-202ENST00000392959 NOL10Q9BSC4 688 aaKnown RBP15.79■□□□□ 0.12
LCA5-202ENST00000392959 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
LCA5-202ENST00000392959 TSR2Q969E8 191 aaKnown RBP15.78■□□□□ 0.12
LCA5-202ENST00000392959 CCDC27Q2M243 656 aa15.78■□□□□ 0.12
LCA5-202ENST00000392959 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
LCA5-202ENST00000392959 C1orf115Q9H7X2 142 aa15.78■□□□□ 0.12
LCA5-202ENST00000392959 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
LCA5-202ENST00000392959 WASHC4Q2M389 1173 aa15.77■□□□□ 0.12
LCA5-202ENST00000392959 TSPY26PQ9H489 355 aa15.77■□□□□ 0.12
LCA5-202ENST00000392959 HFM1A2PYH4 1435 aa15.77■□□□□ 0.11
LCA5-202ENST00000392959 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.11
LCA5-202ENST00000392959 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.11
LCA5-202ENST00000392959 CFTRP13569 1480 aa15.77■□□□□ 0.11
LCA5-202ENST00000392959 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
LCA5-202ENST00000392959 VPS37DQ86XT2 251 aa15.76■□□□□ 0.11
LCA5-202ENST00000392959 FIBPO43427 364 aa15.76■□□□□ 0.11
LCA5-202ENST00000392959 DHX16O60231 1041 aaKnown RBP15.76■□□□□ 0.11
LCA5-202ENST00000392959 SLC12A5Q9H2X9 1139 aa15.76■□□□□ 0.11
LCA5-202ENST00000392959 HSP90B2PQ58FF3 399 aa15.75■□□□□ 0.11
LCA5-202ENST00000392959 CT47B1P0C2W7 299 aaPredicted RBP15.75■□□□□ 0.11
LCA5-202ENST00000392959 OLFM4Q6UX06 510 aa15.75■□□□□ 0.11
LCA5-202ENST00000392959 ACBD3Q9H3P7 528 aa15.75■□□□□ 0.11
LCA5-202ENST00000392959 CWC22Q9HCG8 908 aaKnown RBP15.75■□□□□ 0.11
LCA5-202ENST00000392959 KINO60870 393 aaKnown RBP15.75■□□□□ 0.11
LCA5-202ENST00000392959 NLRP6P59044 892 aa15.75■□□□□ 0.11
LCA5-202ENST00000392959 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
LCA5-202ENST00000392959 WDR63Q8IWG1 891 aa15.75■□□□□ 0.11
LCA5-202ENST00000392959 SCAPERQ9BY12 1400 aa15.74■□□□□ 0.11
LCA5-202ENST00000392959 AFAP1Q8N556 730 aa15.74■□□□□ 0.11
LCA5-202ENST00000392959 GAS2L2Q8NHY3 880 aa15.74■□□□□ 0.11
LCA5-202ENST00000392959 KIAA1107Q9UPP5 1409 aa15.74■□□□□ 0.11
LCA5-202ENST00000392959 ERICH3Q5RHP9 1530 aa15.74■□□□□ 0.11
LCA5-202ENST00000392959 GNAI2P04899 355 aa15.73■□□□□ 0.11
LCA5-202ENST00000392959 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
LCA5-202ENST00000392959 K7ELQ4 463 aaPredicted RBP15.73■□□□□ 0.11
LCA5-202ENST00000392959 RAD21O60216 631 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms