RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
RFC4-202ENST00000392481 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
RFC4-202ENST00000392481 JCADQ9P266 1359 aa17.12■□□□□ 0.33
RFC4-202ENST00000392481 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
RFC4-202ENST00000392481 POGKQ9P215 609 aa17.11■□□□□ 0.33
RFC4-202ENST00000392481 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
RFC4-202ENST00000392481 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
RFC4-202ENST00000392481 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
RFC4-202ENST00000392481 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
RFC4-202ENST00000392481 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
RFC4-202ENST00000392481 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
RFC4-202ENST00000392481 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
RFC4-202ENST00000392481 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
RFC4-202ENST00000392481 DDX17Q92841 729 aaKnown RBP17.06■□□□□ 0.32
RFC4-202ENST00000392481 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
RFC4-202ENST00000392481 FMN2Q9NZ56 1722 aa17.06■□□□□ 0.32
RFC4-202ENST00000392481 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
RFC4-202ENST00000392481 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
RFC4-202ENST00000392481 SHPRHQ149N8 1683 aa17.05■□□□□ 0.32
RFC4-202ENST00000392481 NUTM2FA1L443 756 aa17.04■□□□□ 0.32
RFC4-202ENST00000392481 SOS2Q07890 1332 aaPredicted RBP17.04■□□□□ 0.32
RFC4-202ENST00000392481 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
RFC4-202ENST00000392481 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
RFC4-202ENST00000392481 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
RFC4-202ENST00000392481 ILDR2Q71H61 639 aa17.03■□□□□ 0.32
RFC4-202ENST00000392481 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.32
RFC4-202ENST00000392481 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
RFC4-202ENST00000392481 FOXO3O43524 673 aa17■□□□□ 0.31
RFC4-202ENST00000392481 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
RFC4-202ENST00000392481 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
RFC4-202ENST00000392481 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
RFC4-202ENST00000392481 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
RFC4-202ENST00000392481 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
RFC4-202ENST00000392481 WASLO00401 505 aaPredicted RBP16.98■□□□□ 0.31
RFC4-202ENST00000392481 RGPD8O14715 1765 aaPredicted RBP16.98■□□□□ 0.31
RFC4-202ENST00000392481 PXDNQ92626 1479 aa16.98■□□□□ 0.31
RFC4-202ENST00000392481 LRP6O75581 1613 aa16.97■□□□□ 0.31
RFC4-202ENST00000392481 RGS17Q9UGC6 210 aaPredicted RBP16.97■□□□□ 0.31
RFC4-202ENST00000392481 PHF8Q9UPP1 1060 aa16.97■□□□□ 0.31
RFC4-202ENST00000392481 TRPM1Q7Z4N2 1603 aa16.97■□□□□ 0.31
RFC4-202ENST00000392481 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
RFC4-202ENST00000392481 PCGF6Q9BYE7 350 aa16.96■□□□□ 0.31
RFC4-202ENST00000392481 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.3
RFC4-202ENST00000392481 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.3
RFC4-202ENST00000392481 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.3
RFC4-202ENST00000392481 USP32Q8NFA0 1604 aa16.95■□□□□ 0.3
RFC4-202ENST00000392481 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
RFC4-202ENST00000392481 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
RFC4-202ENST00000392481 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
RFC4-202ENST00000392481 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
RFC4-202ENST00000392481 CENPJQ9HC77 1338 aaPredicted RBP16.94■□□□□ 0.3
RFC4-202ENST00000392481 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
RFC4-202ENST00000392481 KRT28Q7Z3Y7 464 aa16.93■□□□□ 0.3
RFC4-202ENST00000392481 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
RFC4-202ENST00000392481 COL22A1Q8NFW1 1626 aaPredicted RBP16.91■□□□□ 0.3
RFC4-202ENST00000392481 PSME1Q06323 249 aa16.91■□□□□ 0.3
RFC4-202ENST00000392481 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
RFC4-202ENST00000392481 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
RFC4-202ENST00000392481 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
RFC4-202ENST00000392481 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
RFC4-202ENST00000392481 SPATA31A3Q5VYP0 1347 aa16.9■□□□□ 0.3
RFC4-202ENST00000392481 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
RFC4-202ENST00000392481 ATP7BP35670 1465 aa16.89■□□□□ 0.29
RFC4-202ENST00000392481 CLSPNQ9HAW4 1339 aa16.88■□□□□ 0.29
RFC4-202ENST00000392481 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
RFC4-202ENST00000392481 SBNO1A3KN83 1393 aa16.88■□□□□ 0.29
RFC4-202ENST00000392481 SOCS7O14512 581 aa16.87■□□□□ 0.29
RFC4-202ENST00000392481 ZNF772Q68DY9 489 aaPredicted RBP16.87■□□□□ 0.29
RFC4-202ENST00000392481 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
RFC4-202ENST00000392481 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
RFC4-202ENST00000392481 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
RFC4-202ENST00000392481 ADAMTS2O95450 1211 aa16.86■□□□□ 0.29
RFC4-202ENST00000392481 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
RFC4-202ENST00000392481 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
RFC4-202ENST00000392481 AFF2P51816 1311 aa16.85■□□□□ 0.29
RFC4-202ENST00000392481 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
RFC4-202ENST00000392481 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
RFC4-202ENST00000392481 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
RFC4-202ENST00000392481 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
RFC4-202ENST00000392481 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
RFC4-202ENST00000392481 NGLY1Q96IV0 654 aa16.83■□□□□ 0.28
RFC4-202ENST00000392481 TOPAZ1Q8N9V7 1692 aa16.83■□□□□ 0.28
RFC4-202ENST00000392481 TRPM3Q9HCF6 1732 aaPredicted RBP16.82■□□□□ 0.28
RFC4-202ENST00000392481 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
RFC4-202ENST00000392481 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
RFC4-202ENST00000392481 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
RFC4-202ENST00000392481 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
RFC4-202ENST00000392481 POLR3AO14802 1390 aaPredicted RBP16.82■□□□□ 0.28
RFC4-202ENST00000392481 ACEP12821 1306 aa16.81■□□□□ 0.28
RFC4-202ENST00000392481 FNBP4Q8N3X1 1017 aaPredicted RBP16.79■□□□□ 0.28
RFC4-202ENST00000392481 SBNO2Q9Y2G9 1366 aa16.79■□□□□ 0.28
RFC4-202ENST00000392481 MARF1Q9Y4F3 1742 aaKnown RBP16.79■□□□□ 0.28
RFC4-202ENST00000392481 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
RFC4-202ENST00000392481 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
RFC4-202ENST00000392481 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
RFC4-202ENST00000392481 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
RFC4-202ENST00000392481 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
RFC4-202ENST00000392481 RXRBP28702 533 aa16.77■□□□□ 0.27
RFC4-202ENST00000392481 CCER1Q8TC90 406 aaPredicted RBP16.77■□□□□ 0.27
RFC4-202ENST00000392481 QTRT2Q9H974 415 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms