RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
CCDC57-204ENST00000392345 ADGRB1O14514 1584 aa20.36■□□□□ 0.85
CCDC57-204ENST00000392345 ORAI2Q96SN7 254 aa20.33■□□□□ 0.85
CCDC57-204ENST00000392345 LRP6O75581 1613 aa20.33■□□□□ 0.84
CCDC57-204ENST00000392345 RGS17Q9UGC6 210 aaPredicted RBP20.32■□□□□ 0.84
CCDC57-204ENST00000392345 SHPRHQ149N8 1683 aa20.3■□□□□ 0.84
CCDC57-204ENST00000392345 NUTM2FA1L443 756 aa20.29■□□□□ 0.84
CCDC57-204ENST00000392345 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
CCDC57-204ENST00000392345 SAFB2Q14151 953 aaKnown RBP eCLIP20.28■□□□□ 0.84
CCDC57-204ENST00000392345 DLC1Q96QB1 1528 aa20.27■□□□□ 0.84
CCDC57-204ENST00000392345 SIRT1Q96EB6 747 aa20.27■□□□□ 0.84
CCDC57-204ENST00000392345 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
CCDC57-204ENST00000392345 FMN2Q9NZ56 1722 aa20.26■□□□□ 0.83
CCDC57-204ENST00000392345 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
CCDC57-204ENST00000392345 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
CCDC57-204ENST00000392345 ESCO1Q5FWF5 840 aa20.24■□□□□ 0.83
CCDC57-204ENST00000392345 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
CCDC57-204ENST00000392345 SOCS7O14512 581 aa20.23■□□□□ 0.83
CCDC57-204ENST00000392345 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
CCDC57-204ENST00000392345 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
CCDC57-204ENST00000392345 NUTM2BA6NNL0 878 aaPredicted RBP20.22■□□□□ 0.83
CCDC57-204ENST00000392345 NUTM2EB1AL46 878 aaPredicted RBP20.22■□□□□ 0.83
CCDC57-204ENST00000392345 NUTM2AQ8IVF1 878 aaPredicted RBP20.22■□□□□ 0.83
CCDC57-204ENST00000392345 POTEAQ6S8J7 498 aa20.21■□□□□ 0.83
CCDC57-204ENST00000392345 LRRC59Q96AG4 307 aaKnown RBP20.21■□□□□ 0.83
CCDC57-204ENST00000392345 POGKQ9P215 609 aa20.21■□□□□ 0.83
CCDC57-204ENST00000392345 PXDNQ92626 1479 aa20.21■□□□□ 0.83
CCDC57-204ENST00000392345 XPCQ01831 940 aaPredicted RBP20.2■□□□□ 0.82
CCDC57-204ENST00000392345 ADGRB2O60241 1585 aa20.2■□□□□ 0.82
CCDC57-204ENST00000392345 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
CCDC57-204ENST00000392345 HIRIP3Q9BW71 556 aaPredicted RBP20.19■□□□□ 0.82
CCDC57-204ENST00000392345 FOXO3O43524 673 aa20.18■□□□□ 0.82
CCDC57-204ENST00000392345 NPHP3Q7Z494 1330 aa20.18■□□□□ 0.82
CCDC57-204ENST00000392345 ARHGEF28Q8N1W1 1705 aaKnown RBP20.18■□□□□ 0.82
CCDC57-204ENST00000392345 NBPF1Q3BBV0 1214 aa20.17■□□□□ 0.82
CCDC57-204ENST00000392345 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
CCDC57-204ENST00000392345 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
CCDC57-204ENST00000392345 MINK1Q8N4C8 1332 aaPredicted RBP20.17■□□□□ 0.82
CCDC57-204ENST00000392345 USP32Q8NFA0 1604 aa20.16■□□□□ 0.82
CCDC57-204ENST00000392345 NEUROD1Q13562 356 aa20.16■□□□□ 0.82
CCDC57-204ENST00000392345 KIAA1210Q9ULL0 1709 aa20.15■□□□□ 0.82
CCDC57-204ENST00000392345 KIF1AQ12756 1690 aa20.14■□□□□ 0.81
CCDC57-204ENST00000392345 RGPD8O14715 1765 aaPredicted RBP20.13■□□□□ 0.81
CCDC57-204ENST00000392345 PRR36Q9H6K5 1346 aa20.13■□□□□ 0.81
CCDC57-204ENST00000392345 ANKARQ7Z5J8 1434 aa20.12■□□□□ 0.81
CCDC57-204ENST00000392345 PHF8Q9UPP1 1060 aa20.12■□□□□ 0.81
CCDC57-204ENST00000392345 COL22A1Q8NFW1 1626 aaPredicted RBP20.11■□□□□ 0.81
CCDC57-204ENST00000392345 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
CCDC57-204ENST00000392345 TULP4Q9NRJ4 1543 aa20.1■□□□□ 0.81
CCDC57-204ENST00000392345 AFF2P51816 1311 aa20.09■□□□□ 0.81
CCDC57-204ENST00000392345 WASLO00401 505 aaPredicted RBP20.09■□□□□ 0.81
CCDC57-204ENST00000392345 PMFBP1Q8TBY8 1022 aa20.08■□□□□ 0.81
CCDC57-204ENST00000392345 C8orf37Q96NL8 207 aa20.08■□□□□ 0.81
CCDC57-204ENST00000392345 KRT28Q7Z3Y7 464 aa20.07■□□□□ 0.8
CCDC57-204ENST00000392345 SPATA31A3Q5VYP0 1347 aa20.06■□□□□ 0.8
CCDC57-204ENST00000392345 ATP7BP35670 1465 aa20.06■□□□□ 0.8
CCDC57-204ENST00000392345 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
CCDC57-204ENST00000392345 TNS3Q68CZ2 1445 aa20.05■□□□□ 0.8
CCDC57-204ENST00000392345 EIF3AQ14152 1382 aaKnown RBP20.05■□□□□ 0.8
CCDC57-204ENST00000392345 ZNF772Q68DY9 489 aaPredicted RBP20.04■□□□□ 0.8
CCDC57-204ENST00000392345 NBPF8Q3BBV2 869 aa20.03■□□□□ 0.8
CCDC57-204ENST00000392345 CDK19Q9BWU1 502 aa20.01■□□□□ 0.79
CCDC57-204ENST00000392345 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
CCDC57-204ENST00000392345 SBNO1A3KN83 1393 aa20■□□□□ 0.79
CCDC57-204ENST00000392345 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
CCDC57-204ENST00000392345 NUDT16Q96DE0 195 aaKnown RBP20■□□□□ 0.79
CCDC57-204ENST00000392345 NGLY1Q96IV0 654 aa20■□□□□ 0.79
CCDC57-204ENST00000392345 ROCK2O75116 1388 aaKnown RBP19.99■□□□□ 0.79
CCDC57-204ENST00000392345 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
CCDC57-204ENST00000392345 PSME1Q06323 249 aa19.99■□□□□ 0.79
CCDC57-204ENST00000392345 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
CCDC57-204ENST00000392345 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
CCDC57-204ENST00000392345 TOPAZ1Q8N9V7 1692 aa19.97■□□□□ 0.79
CCDC57-204ENST00000392345 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
CCDC57-204ENST00000392345 LMOD2Q6P5Q4 547 aa19.96■□□□□ 0.79
CCDC57-204ENST00000392345 ITSN1Q15811 1721 aa19.96■□□□□ 0.79
CCDC57-204ENST00000392345 FNBP4Q8N3X1 1017 aaPredicted RBP19.95■□□□□ 0.78
CCDC57-204ENST00000392345 NGDNQ8NEJ9 315 aaKnown RBP19.95■□□□□ 0.78
CCDC57-204ENST00000392345 ABCA3Q99758 1704 aa19.95■□□□□ 0.78
CCDC57-204ENST00000392345 GPRASP1Q5JY77 1395 aa19.95■□□□□ 0.78
CCDC57-204ENST00000392345 RXRBP28702 533 aa19.94■□□□□ 0.78
CCDC57-204ENST00000392345 QTRT2Q9H974 415 aaKnown RBP19.94■□□□□ 0.78
CCDC57-204ENST00000392345 USP21Q9UK80 565 aa19.94■□□□□ 0.78
CCDC57-204ENST00000392345 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
CCDC57-204ENST00000392345 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
CCDC57-204ENST00000392345 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
CCDC57-204ENST00000392345 CABP2Q9NPB3 220 aa19.93■□□□□ 0.78
CCDC57-204ENST00000392345 RGS12O14924 1447 aa19.93■□□□□ 0.78
CCDC57-204ENST00000392345 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
CCDC57-204ENST00000392345 RALGAPBQ86X10 1494 aa19.92■□□□□ 0.78
CCDC57-204ENST00000392345 ATRNO75882 1429 aa19.92■□□□□ 0.78
CCDC57-204ENST00000392345 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
CCDC57-204ENST00000392345 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
CCDC57-204ENST00000392345 CCDC61Q9Y6R9 512 aa19.9■□□□□ 0.78
CCDC57-204ENST00000392345 ACEP12821 1306 aa19.9■□□□□ 0.78
CCDC57-204ENST00000392345 CDK12Q9NYV4 1490 aaPredicted RBP19.9■□□□□ 0.78
CCDC57-204ENST00000392345 SLIT2O94813 1529 aa19.9■□□□□ 0.78
CCDC57-204ENST00000392345 RBM6P78332 1123 aaKnown RBP19.89■□□□□ 0.77
CCDC57-204ENST00000392345 PPIP5K1Q6PFW1 1433 aa19.89■□□□□ 0.77
CCDC57-204ENST00000392345 PLEKHG3A1L390 1219 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms