RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KIAA1210Q9ULL0 1709 aa18.35■□□□□ 0.53
GGPS1-203ENST00000391855 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
GGPS1-203ENST00000391855 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
GGPS1-203ENST00000391855 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
GGPS1-203ENST00000391855 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.52
GGPS1-203ENST00000391855 JCADQ9P266 1359 aa18.32■□□□□ 0.52
GGPS1-203ENST00000391855 WAPLQ7Z5K2 1190 aa18.32■□□□□ 0.52
GGPS1-203ENST00000391855 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
GGPS1-203ENST00000391855 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
GGPS1-203ENST00000391855 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
GGPS1-203ENST00000391855 FMN2Q9NZ56 1722 aa18.28■□□□□ 0.52
GGPS1-203ENST00000391855 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
GGPS1-203ENST00000391855 POGKQ9P215 609 aa18.27■□□□□ 0.52
GGPS1-203ENST00000391855 L3MBTL2Q969R5 705 aa18.26■□□□□ 0.51
GGPS1-203ENST00000391855 TRAK1Q9UPV9 953 aa18.26■□□□□ 0.51
GGPS1-203ENST00000391855 SHPRHQ149N8 1683 aa18.26■□□□□ 0.51
GGPS1-203ENST00000391855 ARHGEF28Q8N1W1 1705 aaKnown RBP18.25■□□□□ 0.51
GGPS1-203ENST00000391855 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
GGPS1-203ENST00000391855 SPATA31A6Q5VVP1 1343 aa18.24■□□□□ 0.51
GGPS1-203ENST00000391855 NEUROD1Q13562 356 aa18.23■□□□□ 0.51
GGPS1-203ENST00000391855 KIF1AQ12756 1690 aa18.23■□□□□ 0.51
GGPS1-203ENST00000391855 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
GGPS1-203ENST00000391855 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
GGPS1-203ENST00000391855 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
GGPS1-203ENST00000391855 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
GGPS1-203ENST00000391855 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
GGPS1-203ENST00000391855 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
GGPS1-203ENST00000391855 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
GGPS1-203ENST00000391855 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
GGPS1-203ENST00000391855 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
GGPS1-203ENST00000391855 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
GGPS1-203ENST00000391855 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
GGPS1-203ENST00000391855 NBPF1Q3BBV0 1214 aa18.16■□□□□ 0.5
GGPS1-203ENST00000391855 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
GGPS1-203ENST00000391855 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
GGPS1-203ENST00000391855 DDX17Q92841 729 aaKnown RBP18.15■□□□□ 0.5
GGPS1-203ENST00000391855 PXDNQ92626 1479 aa18.15■□□□□ 0.5
GGPS1-203ENST00000391855 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
GGPS1-203ENST00000391855 USP32Q8NFA0 1604 aa18.14■□□□□ 0.49
GGPS1-203ENST00000391855 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
GGPS1-203ENST00000391855 PHF8Q9UPP1 1060 aa18.14■□□□□ 0.49
GGPS1-203ENST00000391855 LRP6O75581 1613 aa18.13■□□□□ 0.49
GGPS1-203ENST00000391855 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
GGPS1-203ENST00000391855 HIRIP3Q9BW71 556 aaPredicted RBP18.13■□□□□ 0.49
GGPS1-203ENST00000391855 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
GGPS1-203ENST00000391855 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
GGPS1-203ENST00000391855 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
GGPS1-203ENST00000391855 COL22A1Q8NFW1 1626 aaPredicted RBP18.12■□□□□ 0.49
GGPS1-203ENST00000391855 FOXO3O43524 673 aa18.12■□□□□ 0.49
GGPS1-203ENST00000391855 RGPD8O14715 1765 aaPredicted RBP18.12■□□□□ 0.49
GGPS1-203ENST00000391855 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
GGPS1-203ENST00000391855 PCGF6Q9BYE7 350 aa18.11■□□□□ 0.49
GGPS1-203ENST00000391855 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
GGPS1-203ENST00000391855 MEX3CQ5U5Q3 659 aaKnown RBP18.1■□□□□ 0.49
GGPS1-203ENST00000391855 ATP7BP35670 1465 aa18.1■□□□□ 0.49
GGPS1-203ENST00000391855 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
GGPS1-203ENST00000391855 PSME1Q06323 249 aa18.08■□□□□ 0.49
GGPS1-203ENST00000391855 ILDR2Q71H61 639 aa18.08■□□□□ 0.49
GGPS1-203ENST00000391855 PRR36Q9H6K5 1346 aa18.08■□□□□ 0.48
GGPS1-203ENST00000391855 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
GGPS1-203ENST00000391855 SBNO1A3KN83 1393 aa18.07■□□□□ 0.48
GGPS1-203ENST00000391855 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
GGPS1-203ENST00000391855 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
GGPS1-203ENST00000391855 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
GGPS1-203ENST00000391855 NUTM2AQ8IVF1 878 aaPredicted RBP18.06■□□□□ 0.48
GGPS1-203ENST00000391855 SPATA31A3Q5VYP0 1347 aa18.06■□□□□ 0.48
GGPS1-203ENST00000391855 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
GGPS1-203ENST00000391855 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
GGPS1-203ENST00000391855 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
GGPS1-203ENST00000391855 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
GGPS1-203ENST00000391855 XPCQ01831 940 aaPredicted RBP18.05■□□□□ 0.48
GGPS1-203ENST00000391855 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
GGPS1-203ENST00000391855 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
GGPS1-203ENST00000391855 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
GGPS1-203ENST00000391855 ARHGEF10O15013 1369 aa18.04■□□□□ 0.48
GGPS1-203ENST00000391855 PMFBP1Q8TBY8 1022 aa18.03■□□□□ 0.48
GGPS1-203ENST00000391855 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
GGPS1-203ENST00000391855 CARD11Q9BXL7 1154 aa18.02■□□□□ 0.48
GGPS1-203ENST00000391855 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.48
GGPS1-203ENST00000391855 NGDNQ8NEJ9 315 aaKnown RBP18.01■□□□□ 0.47
GGPS1-203ENST00000391855 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
GGPS1-203ENST00000391855 EVC2Q86UK5 1308 aa18■□□□□ 0.47
GGPS1-203ENST00000391855 SRPK2P78362 688 aaKnown RBP18■□□□□ 0.47
GGPS1-203ENST00000391855 POLR3AO14802 1390 aaPredicted RBP17.99■□□□□ 0.47
GGPS1-203ENST00000391855 PLEKHG3A1L390 1219 aa17.98■□□□□ 0.47
GGPS1-203ENST00000391855 SOCS7O14512 581 aa17.98■□□□□ 0.47
GGPS1-203ENST00000391855 AFF2P51816 1311 aa17.98■□□□□ 0.47
GGPS1-203ENST00000391855 ADAMTS2O95450 1211 aa17.98■□□□□ 0.47
GGPS1-203ENST00000391855 POTEAQ6S8J7 498 aa17.98■□□□□ 0.47
GGPS1-203ENST00000391855 C8orf37Q96NL8 207 aa17.98■□□□□ 0.47
GGPS1-203ENST00000391855 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
GGPS1-203ENST00000391855 ALS2Q96Q42 1657 aa17.97■□□□□ 0.47
GGPS1-203ENST00000391855 PPIP5K1Q6PFW1 1433 aa17.96■□□□□ 0.47
GGPS1-203ENST00000391855 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
GGPS1-203ENST00000391855 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
GGPS1-203ENST00000391855 CABP2Q9NPB3 220 aa17.95■□□□□ 0.46
GGPS1-203ENST00000391855 ATAD2Q6PL18 1390 aa17.95■□□□□ 0.46
GGPS1-203ENST00000391855 ACEP12821 1306 aa17.94■□□□□ 0.46
GGPS1-203ENST00000391855 ABCA3Q99758 1704 aa17.94■□□□□ 0.46
GGPS1-203ENST00000391855 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms