RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 LORP23490 312 aaPredicted RBP5.43□□□□□ -1.54
RNU6-239P-201ENST00000390990 RNF19BQ6ZMZ0 732 aa5.43□□□□□ -1.54
RNU6-239P-201ENST00000390990 SENP2Q9HC62 589 aa5.43□□□□□ -1.54
RNU6-239P-201ENST00000390990 DAXXQ9UER7 740 aaPredicted RBP5.43□□□□□ -1.54
RNU6-239P-201ENST00000390990 SALL2Q9Y467 1007 aaPredicted RBP5.43□□□□□ -1.54
RNU6-239P-201ENST00000390990 FECHP22830 423 aa5.42□□□□□ -1.54
RNU6-239P-201ENST00000390990 GCGRP47871 477 aa5.42□□□□□ -1.54
RNU6-239P-201ENST00000390990 TRIM32Q13049 653 aa5.42□□□□□ -1.54
RNU6-239P-201ENST00000390990 MSS51Q4VC12 460 aa5.41□□□□□ -1.54
RNU6-239P-201ENST00000390990 SEMA3EO15041 775 aa5.4□□□□□ -1.54
RNU6-239P-201ENST00000390990 GMPRP36959 345 aa5.4□□□□□ -1.54
RNU6-239P-201ENST00000390990 HIC1Q14526 733 aa5.4□□□□□ -1.54
RNU6-239P-201ENST00000390990 MMP16P51512 607 aa5.39□□□□□ -1.55
RNU6-239P-201ENST00000390990 KIFC2Q96AC6 838 aa5.39□□□□□ -1.55
RNU6-239P-201ENST00000390990 PHOX2BQ99453 314 aa5.39□□□□□ -1.55
RNU6-239P-201ENST00000390990 TSHZ2Q9NRE2 1034 aa5.39□□□□□ -1.55
RNU6-239P-201ENST00000390990 SKOR1P84550 965 aa5.38□□□□□ -1.55
RNU6-239P-201ENST00000390990 RC3H1Q5TC82 1133 aaKnown RBP5.38□□□□□ -1.55
RNU6-239P-201ENST00000390990 NXF1Q9UBU9 619 aaKnown RBP5.38□□□□□ -1.55
RNU6-239P-201ENST00000390990 FAM181BA6NEQ2 426 aa5.37□□□□□ -1.55
RNU6-239P-201ENST00000390990 RBM26Q5T8P6 1007 aaKnown RBP5.37□□□□□ -1.55
RNU6-239P-201ENST00000390990 ZSCAN1Q8NBB4 408 aa5.37□□□□□ -1.55
RNU6-239P-201ENST00000390990 SLC16A10Q8TF71 515 aa5.37□□□□□ -1.55
RNU6-239P-201ENST00000390990 GNPATO15228 680 aa5.36□□□□□ -1.55
RNU6-239P-201ENST00000390990 VEGFBP49765 207 aa5.36□□□□□ -1.55
RNU6-239P-201ENST00000390990 REPIN1Q9BWE0 567 aaKnown RBP5.36□□□□□ -1.55
RNU6-239P-201ENST00000390990 ERBB4Q15303 1308 aa5.35□□□□□ -1.55
RNU6-239P-201ENST00000390990 GPR37O15354 613 aa5.35□□□□□ -1.55
RNU6-239P-201ENST00000390990 DXOO77932 396 aaKnown RBP5.35□□□□□ -1.55
RNU6-239P-201ENST00000390990 BMP1P13497 986 aa5.35□□□□□ -1.55
RNU6-239P-201ENST00000390990 TRIM46Q7Z4K8 759 aa5.35□□□□□ -1.55
RNU6-239P-201ENST00000390990 SULF1Q8IWU6 871 aa5.35□□□□□ -1.55
RNU6-239P-201ENST00000390990 ALDH1A1P00352 501 aa5.34□□□□□ -1.55
RNU6-239P-201ENST00000390990 Q3C1V9 767 aa5.34□□□□□ -1.55
RNU6-239P-201ENST00000390990 CCDC24Q8N4L8 307 aa5.34□□□□□ -1.55
RNU6-239P-201ENST00000390990 IRF7Q92985 503 aa5.34□□□□□ -1.55
RNU6-239P-201ENST00000390990 USB1Q9BQ65 265 aaKnown RBP5.34□□□□□ -1.55
RNU6-239P-201ENST00000390990 H3BM21 787 aa5.33□□□□□ -1.56
RNU6-239P-201ENST00000390990 WNT7BP56706 349 aa5.33□□□□□ -1.56
RNU6-239P-201ENST00000390990 GRIPAP1Q4V328 841 aa5.33□□□□□ -1.56
RNU6-239P-201ENST00000390990 NPAS3Q8IXF0 933 aa5.33□□□□□ -1.56
RNU6-239P-201ENST00000390990 SIAH2O43255 324 aa5.32□□□□□ -1.56
RNU6-239P-201ENST00000390990 SUZ12Q15022 739 aaKnown RBP5.32□□□□□ -1.56
RNU6-239P-201ENST00000390990 HLA-CQ95604 372 aa5.32□□□□□ -1.56
RNU6-239P-201ENST00000390990 CAPN5O15484 640 aaPredicted RBP5.31□□□□□ -1.56
RNU6-239P-201ENST00000390990 TESPA1A2RU30 521 aaPredicted RBP5.3□□□□□ -1.56
RNU6-239P-201ENST00000390990 CD46P15529 392 aa5.3□□□□□ -1.56
RNU6-239P-201ENST00000390990 PTCRAQ6ISU1 281 aaPredicted RBP5.3□□□□□ -1.56
RNU6-239P-201ENST00000390990 KDM4AO75164 1064 aa5.29□□□□□ -1.56
RNU6-239P-201ENST00000390990 ZFP42Q96MM3 310 aa5.29□□□□□ -1.56
RNU6-239P-201ENST00000390990 P3H3Q8IVL6 736 aa5.28□□□□□ -1.56
RNU6-239P-201ENST00000390990 EHBP1Q8NDI1 1231 aa5.28□□□□□ -1.56
RNU6-239P-201ENST00000390990 GUCA2AQ02747 115 aa5.27□□□□□ -1.57
RNU6-239P-201ENST00000390990 SYMPKQ92797 1274 aaKnown RBP5.27□□□□□ -1.57
RNU6-239P-201ENST00000390990 WASF2Q9Y6W5 498 aa5.27□□□□□ -1.57
RNU6-239P-201ENST00000390990 JUNDP17535 347 aa5.26□□□□□ -1.57
RNU6-239P-201ENST00000390990 GSK3AP49840 483 aa5.26□□□□□ -1.57
RNU6-239P-201ENST00000390990 SOBPA7XYQ1 873 aa5.25□□□□□ -1.57
RNU6-239P-201ENST00000390990 SH3BP2P78314 561 aa5.25□□□□□ -1.57
RNU6-239P-201ENST00000390990 SMYD5Q6GMV2 418 aa5.25□□□□□ -1.57
RNU6-239P-201ENST00000390990 KCTD17Q8N5Z5 321 aa5.25□□□□□ -1.57
RNU6-239P-201ENST00000390990 HOXA2O43364 376 aa5.24□□□□□ -1.57
RNU6-239P-201ENST00000390990 USP46P62068 366 aa5.24□□□□□ -1.57
RNU6-239P-201ENST00000390990 NUDT12Q9BQG2 462 aa5.24□□□□□ -1.57
RNU6-239P-201ENST00000390990 RTN4Q9NQC3 1192 aaKnown RBP5.24□□□□□ -1.57
RNU6-239P-201ENST00000390990 VSIG8P0DPA2 414 aa5.23□□□□□ -1.57
RNU6-239P-201ENST00000390990 KCNMA1Q12791 1236 aa5.23□□□□□ -1.57
RNU6-239P-201ENST00000390990 TLL2Q9Y6L7 1015 aa5.23□□□□□ -1.57
RNU6-239P-201ENST00000390990 MRPL14Q6P1L8 145 aaKnown RBP5.22□□□□□ -1.57
RNU6-239P-201ENST00000390990 PURBQ96QR8 312 aaKnown RBP5.22□□□□□ -1.57
RNU6-239P-201ENST00000390990 MDM2Q00987 491 aaPredicted RBP5.21□□□□□ -1.58
RNU6-239P-201ENST00000390990 LINC01559Q495D7 138 aa5.21□□□□□ -1.58
RNU6-239P-201ENST00000390990 RETREG3Q86VR2 466 aa5.21□□□□□ -1.58
RNU6-239P-201ENST00000390990 BAP1Q92560 729 aa5.21□□□□□ -1.58
RNU6-239P-201ENST00000390990 TIMP2P16035 220 aa5.2□□□□□ -1.58
RNU6-239P-201ENST00000390990 NNTQ13423 1086 aa5.2□□□□□ -1.58
RNU6-239P-201ENST00000390990 AMER1Q5JTC6 1135 aaPredicted RBP5.2□□□□□ -1.58
RNU6-239P-201ENST00000390990 GPIHBP1Q8IV16 184 aa5.2□□□□□ -1.58
RNU6-239P-201ENST00000390990 KLF16Q9BXK1 252 aaPredicted RBP5.2□□□□□ -1.58
RNU6-239P-201ENST00000390990 CCNYL3P0C7X3 344 aa5.19□□□□□ -1.58
RNU6-239P-201ENST00000390990 SCARF1Q14162 830 aa5.19□□□□□ -1.58
RNU6-239P-201ENST00000390990 PCDHGC3Q9UN70 934 aa5.19□□□□□ -1.58
RNU6-239P-201ENST00000390990 IRF6O14896 467 aa5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 MS4A1P11836 297 aa5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 WDR4P57081 412 aaKnown RBP5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 MAP2K5Q13163 448 aa5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 MPNDQ8N594 471 aa5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 UNC93B1Q9H1C4 597 aa5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 EVA1BQ9NVM1 165 aa5.18□□□□□ -1.58
RNU6-239P-201ENST00000390990 PPFIA3O75145 1194 aa5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 GDF11O95390 407 aa5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 ADH1CP00326 375 aa5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 VARSP26640 1264 aaKnown RBP5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 RASSF7Q02833 373 aa5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 TMEM151AQ8N4L1 468 aa5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 ZNF511Q8NB15 262 aa5.17□□□□□ -1.58
RNU6-239P-201ENST00000390990 PLEKHG3A1L390 1219 aa5.16□□□□□ -1.58
RNU6-239P-201ENST00000390990 C6orf229H3BNL8 230 aa5.16□□□□□ -1.58
RNU6-239P-201ENST00000390990 MAN1A2O60476 641 aa5.16□□□□□ -1.58
RNU6-239P-201ENST00000390990 FDX1P10109 184 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms