RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
RNU6-440P-201ENST00000390882 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
RNU6-440P-201ENST00000390882 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
RNU6-440P-201ENST00000390882 CAPN5O15484 640 aaPredicted RBP4.44□□□□□ -1.7
RNU6-440P-201ENST00000390882 DNAJB2P25686 324 aa4.44□□□□□ -1.7
RNU6-440P-201ENST00000390882 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
RNU6-440P-201ENST00000390882 CDHR5Q9HBB8 845 aa4.44□□□□□ -1.7
RNU6-440P-201ENST00000390882 TRIM32Q13049 653 aa4.43□□□□□ -1.7
RNU6-440P-201ENST00000390882 ZFP42Q96MM3 310 aa4.43□□□□□ -1.7
RNU6-440P-201ENST00000390882 DCAF8L2P0C7V8 631 aa4.42□□□□□ -1.7
RNU6-440P-201ENST00000390882 TMEM134Q9H6X4 195 aa4.42□□□□□ -1.7
RNU6-440P-201ENST00000390882 GRXCR2A6NFK2 248 aa4.41□□□□□ -1.7
RNU6-440P-201ENST00000390882 PUS10Q3MIT2 529 aaKnown RBP4.41□□□□□ -1.7
RNU6-440P-201ENST00000390882 FAM160A2Q8N612 972 aaPredicted RBP4.41□□□□□ -1.7
RNU6-440P-201ENST00000390882 SCARF2Q96GP6 870 aaPredicted RBP4.41□□□□□ -1.7
RNU6-440P-201ENST00000390882 K7ELQ4 463 aaPredicted RBP4.4□□□□□ -1.71
RNU6-440P-201ENST00000390882 ALDH1A1P00352 501 aa4.4□□□□□ -1.71
RNU6-440P-201ENST00000390882 SLC10A3P09131 477 aa4.4□□□□□ -1.71
RNU6-440P-201ENST00000390882 MARSP56192 900 aaKnown RBP4.4□□□□□ -1.71
RNU6-440P-201ENST00000390882 SPOCK3Q9BQ16 436 aa4.4□□□□□ -1.71
RNU6-440P-201ENST00000390882 NPDC1Q9NQX5 325 aaPredicted RBP4.4□□□□□ -1.71
RNU6-440P-201ENST00000390882 GTPBP6O43824 516 aaPredicted RBP4.39□□□□□ -1.71
RNU6-440P-201ENST00000390882 OSBPP22059 807 aa4.39□□□□□ -1.71
RNU6-440P-201ENST00000390882 RC3H1Q5TC82 1133 aaKnown RBP4.39□□□□□ -1.71
RNU6-440P-201ENST00000390882 THAP11Q96EK4 314 aa4.39□□□□□ -1.71
RNU6-440P-201ENST00000390882 FMNL1O95466 1100 aaPredicted RBP4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 PLA2G4EQ3MJ16 856 aa4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 ZNF385CQ66K41 422 aaPredicted RBP4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 SVOPQ8N4V2 548 aa4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 RBM46Q8TBY0 533 aaKnown RBP4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 CNTNAP3BQ96NU0 1288 aa4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 CNTNAP3Q9BZ76 1288 aa4.38□□□□□ -1.71
RNU6-440P-201ENST00000390882 PPFIA3O75145 1194 aa4.37□□□□□ -1.71
RNU6-440P-201ENST00000390882 KRT76Q01546 638 aa4.37□□□□□ -1.71
RNU6-440P-201ENST00000390882 SCARF1Q14162 830 aa4.37□□□□□ -1.71
RNU6-440P-201ENST00000390882 RSPH4AQ5TD94 716 aa4.37□□□□□ -1.71
RNU6-440P-201ENST00000390882 CADPS2Q86UW7 1296 aa4.37□□□□□ -1.71
RNU6-440P-201ENST00000390882 ARHGEF15O94989 841 aa4.36□□□□□ -1.71
RNU6-440P-201ENST00000390882 WNT7BP56706 349 aa4.36□□□□□ -1.71
RNU6-440P-201ENST00000390882 GALNT6Q8NCL4 622 aa4.36□□□□□ -1.71
RNU6-440P-201ENST00000390882 PRDM9Q9NQV7 894 aa4.36□□□□□ -1.71
RNU6-440P-201ENST00000390882 SALL2Q9Y467 1007 aaPredicted RBP4.36□□□□□ -1.71
RNU6-440P-201ENST00000390882 WASF2Q9Y6W5 498 aa4.36□□□□□ -1.71
RNU6-440P-201ENST00000390882 RCCD1A6NED2 376 aa4.35□□□□□ -1.71
RNU6-440P-201ENST00000390882 SOBPA7XYQ1 873 aa4.35□□□□□ -1.71
RNU6-440P-201ENST00000390882 MORN1Q5T089 497 aa4.35□□□□□ -1.71
RNU6-440P-201ENST00000390882 PROCP04070 461 aa4.34□□□□□ -1.71
RNU6-440P-201ENST00000390882 FECHP22830 423 aa4.34□□□□□ -1.71
RNU6-440P-201ENST00000390882 MSS51Q4VC12 460 aa4.34□□□□□ -1.71
RNU6-440P-201ENST00000390882 MRPL14Q6P1L8 145 aaKnown RBP4.34□□□□□ -1.71
RNU6-440P-201ENST00000390882 BBXQ8WY36 941 aaPredicted RBP4.34□□□□□ -1.71
RNU6-440P-201ENST00000390882 SKOR1P84550 965 aa4.33□□□□□ -1.72
RNU6-440P-201ENST00000390882 BRICD5Q6PL45 260 aa4.33□□□□□ -1.72
RNU6-440P-201ENST00000390882 GPR161Q8N6U8 529 aaKnown RBP4.33□□□□□ -1.72
RNU6-440P-201ENST00000390882 DCAF5Q96JK2 942 aa4.33□□□□□ -1.72
RNU6-440P-201ENST00000390882 SIAH2O43255 324 aa4.32□□□□□ -1.72
RNU6-440P-201ENST00000390882 MAN1A2O60476 641 aa4.32□□□□□ -1.72
RNU6-440P-201ENST00000390882 ITGB2P05107 769 aa4.32□□□□□ -1.72
RNU6-440P-201ENST00000390882 PURBQ96QR8 312 aaKnown RBP4.32□□□□□ -1.72
RNU6-440P-201ENST00000390882 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.32□□□□□ -1.72
RNU6-440P-201ENST00000390882 SLC27A5Q9Y2P5 690 aa4.32□□□□□ -1.72
RNU6-440P-201ENST00000390882 SLURP2P0DP57 97 aa4.31□□□□□ -1.72
RNU6-440P-201ENST00000390882 ATP6V1AP38606 617 aa4.31□□□□□ -1.72
RNU6-440P-201ENST00000390882 WHAMMQ8TF30 809 aa4.31□□□□□ -1.72
RNU6-440P-201ENST00000390882 COL25A1Q9BXS0 654 aaPredicted RBP4.31□□□□□ -1.72
RNU6-440P-201ENST00000390882 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
RNU6-440P-201ENST00000390882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.3□□□□□ -1.72
RNU6-440P-201ENST00000390882 MMP16P51512 607 aa4.3□□□□□ -1.72
RNU6-440P-201ENST00000390882 ADGRG1Q9Y653 693 aa4.3□□□□□ -1.72
RNU6-440P-201ENST00000390882 PHF20L1A8MW92 1017 aa4.29□□□□□ -1.72
RNU6-440P-201ENST00000390882 BAG6P46379 1132 aa4.29□□□□□ -1.72
RNU6-440P-201ENST00000390882 PLCB2Q00722 1185 aa4.29□□□□□ -1.72
RNU6-440P-201ENST00000390882 SLC24A1O60721 1099 aa4.28□□□□□ -1.72
RNU6-440P-201ENST00000390882 FUT2Q10981 343 aa4.28□□□□□ -1.72
RNU6-440P-201ENST00000390882 SPRYD3Q8NCJ5 442 aa4.28□□□□□ -1.72
RNU6-440P-201ENST00000390882 EHBP1Q8NDI1 1231 aa4.28□□□□□ -1.72
RNU6-440P-201ENST00000390882 PAXIP1Q6ZW49 1069 aaPredicted RBP4.27□□□□□ -1.73
RNU6-440P-201ENST00000390882 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
RNU6-440P-201ENST00000390882 NANOS1Q8WY41 292 aaKnown RBP4.27□□□□□ -1.73
RNU6-440P-201ENST00000390882 RNFT1Q5M7Z0 435 aa4.26□□□□□ -1.73
RNU6-440P-201ENST00000390882 CCDC24Q8N4L8 307 aa4.26□□□□□ -1.73
RNU6-440P-201ENST00000390882 CFAP44Q96MT7 982 aa4.26□□□□□ -1.73
RNU6-440P-201ENST00000390882 GOLGA2P5Q9HBQ8 144 aa4.26□□□□□ -1.73
RNU6-440P-201ENST00000390882 ARIH1Q9Y4X5 557 aaPredicted RBP4.26□□□□□ -1.73
RNU6-440P-201ENST00000390882 FURINP09958 794 aa4.25□□□□□ -1.73
RNU6-440P-201ENST00000390882 MAP3K10Q02779 954 aa4.25□□□□□ -1.73
RNU6-440P-201ENST00000390882 RNF19BQ6ZMZ0 732 aa4.25□□□□□ -1.73
RNU6-440P-201ENST00000390882 BEND7Q8N7W2 519 aaPredicted RBP4.25□□□□□ -1.73
RNU6-440P-201ENST00000390882 ENAMQ9NRM1 1142 aa4.25□□□□□ -1.73
RNU6-440P-201ENST00000390882 DXOO77932 396 aaKnown RBP4.24□□□□□ -1.73
RNU6-440P-201ENST00000390882 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
RNU6-440P-201ENST00000390882 CNTNAP5Q8WYK1 1306 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 PLEKHG3A1L390 1219 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 TIMP2P16035 220 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 HAP1P54257 671 aaPredicted RBP4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 PTGDRQ13258 359 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 FAM161AQ3B820 660 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 Q3C1V9 767 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 LYPD4Q6UWN0 246 aa4.23□□□□□ -1.73
RNU6-440P-201ENST00000390882 RDH13Q8NBN7 331 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms