RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 KNDC1Q76NI1 1749 aa21.68■■□□□ 1.06
SNRPN-202ENST00000390687 LAMC1P11047 1609 aa21.68■■□□□ 1.06
SNRPN-202ENST00000390687 RGS17Q9UGC6 210 aaPredicted RBP21.66■■□□□ 1.06
SNRPN-202ENST00000390687 PRAM1Q96QH2 718 aa21.65■■□□□ 1.06
SNRPN-202ENST00000390687 ADGRB1O14514 1584 aa21.64■■□□□ 1.06
SNRPN-202ENST00000390687 CDC42BPGQ6DT37 1551 aa21.64■■□□□ 1.05
SNRPN-202ENST00000390687 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
SNRPN-202ENST00000390687 NHSL1Q5SYE7 1610 aa21.63■■□□□ 1.05
SNRPN-202ENST00000390687 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
SNRPN-202ENST00000390687 ESCO1Q5FWF5 840 aa21.63■■□□□ 1.05
SNRPN-202ENST00000390687 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
SNRPN-202ENST00000390687 TRAK1Q9UPV9 953 aa21.63■■□□□ 1.05
SNRPN-202ENST00000390687 SAFB2Q14151 953 aaKnown RBP eCLIP21.62■■□□□ 1.05
SNRPN-202ENST00000390687 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
SNRPN-202ENST00000390687 SPATA31A6Q5VVP1 1343 aa21.62■■□□□ 1.05
SNRPN-202ENST00000390687 POGKQ9P215 609 aa21.61■■□□□ 1.05
SNRPN-202ENST00000390687 DLC1Q96QB1 1528 aa21.59■■□□□ 1.05
SNRPN-202ENST00000390687 SOCS7O14512 581 aa21.59■■□□□ 1.05
SNRPN-202ENST00000390687 SOS2Q07890 1332 aaPredicted RBP21.59■■□□□ 1.05
SNRPN-202ENST00000390687 SHPRHQ149N8 1683 aa21.58■■□□□ 1.05
SNRPN-202ENST00000390687 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
SNRPN-202ENST00000390687 LRP6O75581 1613 aa21.56■■□□□ 1.04
SNRPN-202ENST00000390687 FOXO3O43524 673 aa21.56■■□□□ 1.04
SNRPN-202ENST00000390687 NUTM2BA6NNL0 878 aaPredicted RBP21.55■■□□□ 1.04
SNRPN-202ENST00000390687 NUTM2EB1AL46 878 aaPredicted RBP21.55■■□□□ 1.04
SNRPN-202ENST00000390687 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
SNRPN-202ENST00000390687 NUTM2AQ8IVF1 878 aaPredicted RBP21.55■■□□□ 1.04
SNRPN-202ENST00000390687 NBPF1Q3BBV0 1214 aa21.54■■□□□ 1.04
SNRPN-202ENST00000390687 POTEAQ6S8J7 498 aa21.54■■□□□ 1.04
SNRPN-202ENST00000390687 NPHP3Q7Z494 1330 aa21.54■■□□□ 1.04
SNRPN-202ENST00000390687 PNPLA6Q8IY17 1366 aa21.54■■□□□ 1.04
SNRPN-202ENST00000390687 FMN2Q9NZ56 1722 aa21.54■■□□□ 1.04
SNRPN-202ENST00000390687 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
SNRPN-202ENST00000390687 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
SNRPN-202ENST00000390687 MINK1Q8N4C8 1332 aaPredicted RBP21.51■■□□□ 1.03
SNRPN-202ENST00000390687 XPCQ01831 940 aaPredicted RBP21.51■■□□□ 1.03
SNRPN-202ENST00000390687 PXDNQ92626 1479 aa21.49■■□□□ 1.03
SNRPN-202ENST00000390687 RGPD8O14715 1765 aaPredicted RBP21.48■■□□□ 1.03
SNRPN-202ENST00000390687 KIAA1210Q9ULL0 1709 aa21.48■■□□□ 1.03
SNRPN-202ENST00000390687 PHF8Q9UPP1 1060 aa21.48■■□□□ 1.03
SNRPN-202ENST00000390687 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
SNRPN-202ENST00000390687 ADGRB2O60241 1585 aa21.46■■□□□ 1.03
SNRPN-202ENST00000390687 KRT28Q7Z3Y7 464 aa21.45■■□□□ 1.02
SNRPN-202ENST00000390687 ARHGEF28Q8N1W1 1705 aaKnown RBP21.44■■□□□ 1.02
SNRPN-202ENST00000390687 ANKARQ7Z5J8 1434 aa21.44■■□□□ 1.02
SNRPN-202ENST00000390687 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
SNRPN-202ENST00000390687 ADAMTS2O95450 1211 aa21.43■■□□□ 1.02
SNRPN-202ENST00000390687 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
SNRPN-202ENST00000390687 USP32Q8NFA0 1604 aa21.42■■□□□ 1.02
SNRPN-202ENST00000390687 PRR36Q9H6K5 1346 aa21.42■■□□□ 1.02
SNRPN-202ENST00000390687 KIF1AQ12756 1690 aa21.42■■□□□ 1.02
SNRPN-202ENST00000390687 C8orf37Q96NL8 207 aa21.41■■□□□ 1.02
SNRPN-202ENST00000390687 SPATA31A3Q5VYP0 1347 aa21.41■■□□□ 1.02
SNRPN-202ENST00000390687 PSME1Q06323 249 aa21.4■■□□□ 1.02
SNRPN-202ENST00000390687 CDK19Q9BWU1 502 aa21.39■■□□□ 1.02
SNRPN-202ENST00000390687 AFF2P51816 1311 aa21.39■■□□□ 1.02
SNRPN-202ENST00000390687 EIF3AQ14152 1382 aaKnown RBP21.39■■□□□ 1.01
SNRPN-202ENST00000390687 COL22A1Q8NFW1 1626 aaPredicted RBP21.39■■□□□ 1.01
SNRPN-202ENST00000390687 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
SNRPN-202ENST00000390687 NUDT16Q96DE0 195 aaKnown RBP21.38■■□□□ 1.01
SNRPN-202ENST00000390687 TULP4Q9NRJ4 1543 aa21.38■■□□□ 1.01
SNRPN-202ENST00000390687 NGLY1Q96IV0 654 aa21.37■■□□□ 1.01
SNRPN-202ENST00000390687 CENPJQ9HC77 1338 aaPredicted RBP21.35■■□□□ 1.01
SNRPN-202ENST00000390687 TRPM1Q7Z4N2 1603 aa21.34■■□□□ 1.01
SNRPN-202ENST00000390687 SBNO1A3KN83 1393 aa21.34■■□□□ 1.01
SNRPN-202ENST00000390687 ROCK2O75116 1388 aaKnown RBP21.33■■□□□ 1
SNRPN-202ENST00000390687 RXRBP28702 533 aa21.32■■□□□ 1
SNRPN-202ENST00000390687 TNS3Q68CZ2 1445 aa21.32■■□□□ 1
SNRPN-202ENST00000390687 FNBP4Q8N3X1 1017 aaPredicted RBP21.32■■□□□ 1
SNRPN-202ENST00000390687 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
SNRPN-202ENST00000390687 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
SNRPN-202ENST00000390687 ATP7BP35670 1465 aa21.31■■□□□ 1
SNRPN-202ENST00000390687 TONSLQ96HA7 1378 aa21.31■■□□□ 1
SNRPN-202ENST00000390687 LMOD2Q6P5Q4 547 aa21.31■■□□□ 1
SNRPN-202ENST00000390687 GPRASP1Q5JY77 1395 aa21.3■■□□□ 1
SNRPN-202ENST00000390687 CABLES1Q8TDN4 633 aa21.3■■□□□ 1
SNRPN-202ENST00000390687 CCDC61Q9Y6R9 512 aa21.3■■□□□ 1
SNRPN-202ENST00000390687 USP21Q9UK80 565 aa21.29■■□□□ 1
SNRPN-202ENST00000390687 PLEKHG5O94827 1062 aa21.28■■□□□ 1
SNRPN-202ENST00000390687 ARHGEF10O15013 1369 aa21.27■■□□□ 1
SNRPN-202ENST00000390687 PLEKHG3A1L390 1219 aa21.27■■□□□ 1
SNRPN-202ENST00000390687 SRPK2P78362 688 aaKnown RBP21.27■■□□□ 1
SNRPN-202ENST00000390687 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
SNRPN-202ENST00000390687 CABP2Q9NPB3 220 aa21.27■■□□□ 1
SNRPN-202ENST00000390687 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
SNRPN-202ENST00000390687 TRPM3Q9HCF6 1732 aaPredicted RBP21.25■□□□□ 0.99
SNRPN-202ENST00000390687 ACEP12821 1306 aa21.25■□□□□ 0.99
SNRPN-202ENST00000390687 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
SNRPN-202ENST00000390687 PAK3O75914 559 aaPredicted RBP21.24■□□□□ 0.99
SNRPN-202ENST00000390687 QRICH2Q9H0J4 1663 aa21.24■□□□□ 0.99
SNRPN-202ENST00000390687 HAP1P54257 671 aaPredicted RBP21.24■□□□□ 0.99
SNRPN-202ENST00000390687 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
SNRPN-202ENST00000390687 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
SNRPN-202ENST00000390687 POLR3AO14802 1390 aaPredicted RBP21.23■□□□□ 0.99
SNRPN-202ENST00000390687 MARF1Q9Y4F3 1742 aaKnown RBP21.23■□□□□ 0.99
SNRPN-202ENST00000390687 BCL9LQ86UU0 1499 aa21.23■□□□□ 0.99
SNRPN-202ENST00000390687 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
SNRPN-202ENST00000390687 TOPAZ1Q8N9V7 1692 aa21.21■□□□□ 0.99
SNRPN-202ENST00000390687 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
SNRPN-202ENST00000390687 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms