RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 U2AF1L5P0DN76 240 aaPredicted RBP26.92■■□□□ 1.9
COL23A1-201ENST00000390654 U2AF1Q01081 240 aaKnown RBP eCLIP26.92■■□□□ 1.9
COL23A1-201ENST00000390654 CEP152O94986 1710 aa26.9■■□□□ 1.9
COL23A1-201ENST00000390654 TSR2Q969E8 191 aaKnown RBP26.9■■□□□ 1.9
COL23A1-201ENST00000390654 ASXL2Q76L83 1435 aa26.9■■□□□ 1.9
COL23A1-201ENST00000390654 CLASP1Q7Z460 1538 aa26.89■■□□□ 1.9
COL23A1-201ENST00000390654 PDZRN3Q9UPQ7 1066 aa26.89■■□□□ 1.9
COL23A1-201ENST00000390654 CABP2Q9NPB3 220 aa26.88■■□□□ 1.89
COL23A1-201ENST00000390654 POGKQ9P215 609 aa26.88■■□□□ 1.89
COL23A1-201ENST00000390654 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
COL23A1-201ENST00000390654 POLR3AO14802 1390 aaPredicted RBP26.86■■□□□ 1.89
COL23A1-201ENST00000390654 ABCA6Q8N139 1617 aa26.85■■□□□ 1.89
COL23A1-201ENST00000390654 U2SURPO15042 1029 aaKnown RBP26.85■■□□□ 1.89
COL23A1-201ENST00000390654 MAPK8IP3Q9UPT6 1336 aa26.85■■□□□ 1.89
COL23A1-201ENST00000390654 TET3O43151 1660 aa26.81■■□□□ 1.88
COL23A1-201ENST00000390654 FTSJ3Q8IY81 847 aaKnown RBP26.81■■□□□ 1.88
COL23A1-201ENST00000390654 CFAP53Q96M91 514 aa26.81■■□□□ 1.88
COL23A1-201ENST00000390654 BECN1Q14457 450 aa26.8■■□□□ 1.88
COL23A1-201ENST00000390654 PMFBP1Q8TBY8 1022 aa26.8■■□□□ 1.88
COL23A1-201ENST00000390654 MAP3K4Q9Y6R4 1608 aa26.8■■□□□ 1.88
COL23A1-201ENST00000390654 SLC24A1O60721 1099 aa26.8■■□□□ 1.88
COL23A1-201ENST00000390654 UPF2Q9HAU5 1272 aaKnown RBP26.79■■□□□ 1.88
COL23A1-201ENST00000390654 GGNBP2Q9H3C7 697 aa26.78■■□□□ 1.88
COL23A1-201ENST00000390654 SRPK2P78362 688 aaKnown RBP26.77■■□□□ 1.88
COL23A1-201ENST00000390654 NGEFQ8N5V2 710 aa26.76■■□□□ 1.88
COL23A1-201ENST00000390654 C14orf93Q9H972 538 aaKnown RBP26.75■■□□□ 1.87
COL23A1-201ENST00000390654 SMC4Q9NTJ3 1288 aa26.75■■□□□ 1.87
COL23A1-201ENST00000390654 MFAP1P55081 439 aaKnown RBP26.75■■□□□ 1.87
COL23A1-201ENST00000390654 EXOSC9Q06265 439 aaKnown RBP26.74■■□□□ 1.87
COL23A1-201ENST00000390654 RWDD1Q9H446 243 aaPredicted RBP26.74■■□□□ 1.87
COL23A1-201ENST00000390654 TBC1D2Q9BYX2 928 aa26.74■■□□□ 1.87
COL23A1-201ENST00000390654 WDR63Q8IWG1 891 aa26.74■■□□□ 1.87
COL23A1-201ENST00000390654 NPATQ14207 1427 aa26.73■■□□□ 1.87
COL23A1-201ENST00000390654 MINK1Q8N4C8 1332 aaPredicted RBP26.73■■□□□ 1.87
COL23A1-201ENST00000390654 ITPRIPQ8IWB1 547 aa26.73■■□□□ 1.87
COL23A1-201ENST00000390654 INO80Q9ULG1 1556 aaPredicted RBP26.72■■□□□ 1.87
COL23A1-201ENST00000390654 GZF1Q9H116 711 aaPredicted RBP26.72■■□□□ 1.87
COL23A1-201ENST00000390654 MYH16Q9H6N6 1097 aa26.72■■□□□ 1.87
COL23A1-201ENST00000390654 MROH2AA6NES4 1674 aa26.71■■□□□ 1.87
COL23A1-201ENST00000390654 MYOM2P54296 1465 aa26.71■■□□□ 1.87
COL23A1-201ENST00000390654 MVPQ14764 893 aaKnown RBP26.71■■□□□ 1.87
COL23A1-201ENST00000390654 EIF5BO60841 1220 aaKnown RBP26.71■■□□□ 1.87
COL23A1-201ENST00000390654 FBLN1P23142 703 aa26.71■■□□□ 1.87
COL23A1-201ENST00000390654 ZKSCAN2Q63HK3 967 aa26.71■■□□□ 1.87
COL23A1-201ENST00000390654 DZIP1LQ8IYY4 767 aaKnown RBP26.71■■□□□ 1.87
COL23A1-201ENST00000390654 DEPDC5O75140 1603 aa26.71■■□□□ 1.87
COL23A1-201ENST00000390654 CD109Q6YHK3 1445 aa26.7■■□□□ 1.87
COL23A1-201ENST00000390654 MROH1Q8NDA8 1641 aa26.7■■□□□ 1.86
COL23A1-201ENST00000390654 PPRC1Q5VV67 1664 aaKnown RBP26.69■■□□□ 1.86
COL23A1-201ENST00000390654 TBC1D32Q96NH3 1257 aa26.69■■□□□ 1.86
COL23A1-201ENST00000390654 PHF23Q9BUL5 403 aaPredicted RBP26.69■■□□□ 1.86
COL23A1-201ENST00000390654 NINLQ9Y2I6 1382 aa26.68■■□□□ 1.86
COL23A1-201ENST00000390654 IDI1Q13907 227 aa26.67■■□□□ 1.86
COL23A1-201ENST00000390654 KIF1BO60333 1816 aa26.67■■□□□ 1.86
COL23A1-201ENST00000390654 EFCAB6Q5THR3 1501 aa26.67■■□□□ 1.86
COL23A1-201ENST00000390654 ABCA9Q8IUA7 1624 aa26.67■■□□□ 1.86
COL23A1-201ENST00000390654 SSH1Q8WYL5 1049 aa26.67■■□□□ 1.86
COL23A1-201ENST00000390654 VWDEQ8N2E2 1590 aa26.66■■□□□ 1.86
COL23A1-201ENST00000390654 TRIM27P14373 513 aa26.66■■□□□ 1.86
COL23A1-201ENST00000390654 EVC2Q86UK5 1308 aa26.65■■□□□ 1.86
COL23A1-201ENST00000390654 NLRP1Q9C000 1473 aa26.65■■□□□ 1.86
COL23A1-201ENST00000390654 KIDINS220Q9ULH0 1771 aa26.64■■□□□ 1.86
COL23A1-201ENST00000390654 KIAA1210Q9ULL0 1709 aa26.64■■□□□ 1.85
COL23A1-201ENST00000390654 SHPRHQ149N8 1683 aa26.64■■□□□ 1.85
COL23A1-201ENST00000390654 ZNF518AQ6AHZ1 1483 aa26.64■■□□□ 1.85
COL23A1-201ENST00000390654 SBNO2Q9Y2G9 1366 aa26.64■■□□□ 1.85
COL23A1-201ENST00000390654 NOB1Q9ULX3 412 aaKnown RBP26.64■■□□□ 1.85
COL23A1-201ENST00000390654 ANTXR1Q9H6X2 564 aa26.63■■□□□ 1.85
COL23A1-201ENST00000390654 IQSEC2Q5JU85 1478 aa26.62■■□□□ 1.85
COL23A1-201ENST00000390654 TMPOP42166 694 aaKnown RBP26.61■■□□□ 1.85
COL23A1-201ENST00000390654 OSCARQ8IYS5 282 aa26.61■■□□□ 1.85
COL23A1-201ENST00000390654 ARAP3Q8WWN8 1544 aa26.61■■□□□ 1.85
COL23A1-201ENST00000390654 FBXO31Q5XUX0 539 aaPredicted RBP26.61■■□□□ 1.85
COL23A1-201ENST00000390654 STAG3Q9UJ98 1225 aa26.61■■□□□ 1.85
COL23A1-201ENST00000390654 VGFO15240 615 aaPredicted RBP26.6■■□□□ 1.85
COL23A1-201ENST00000390654 C22orf23Q9BZE7 217 aa26.6■■□□□ 1.85
COL23A1-201ENST00000390654 RIPK4P57078 832 aa26.59■■□□□ 1.85
COL23A1-201ENST00000390654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.59■■□□□ 1.85
COL23A1-201ENST00000390654 TMEM57Q8N5G2 664 aa26.59■■□□□ 1.85
COL23A1-201ENST00000390654 CCDC27Q2M243 656 aa26.59■■□□□ 1.85
COL23A1-201ENST00000390654 TRIM35Q9UPQ4 493 aa26.59■■□□□ 1.85
COL23A1-201ENST00000390654 PRAM1Q96QH2 718 aa26.58■■□□□ 1.85
COL23A1-201ENST00000390654 MLECQ14165 292 aa26.57■■□□□ 1.84
COL23A1-201ENST00000390654 LNPKQ9C0E8 428 aa26.57■■□□□ 1.84
COL23A1-201ENST00000390654 QRICH2Q9H0J4 1663 aa26.56■■□□□ 1.84
COL23A1-201ENST00000390654 NRXN1Q9ULB1 1477 aa26.56■■□□□ 1.84
COL23A1-201ENST00000390654 ELL2O00472 640 aaPredicted RBP26.55■■□□□ 1.84
COL23A1-201ENST00000390654 ATF7IPQ6VMQ6 1270 aa26.55■■□□□ 1.84
COL23A1-201ENST00000390654 A0A1W2PP64 1363 aa26.54■■□□□ 1.84
COL23A1-201ENST00000390654 ANKRD36BQ8N2N9 1353 aa26.54■■□□□ 1.84
COL23A1-201ENST00000390654 THUMPD2Q9BTF0 503 aaKnown RBP26.53■■□□□ 1.84
COL23A1-201ENST00000390654 C1orf115Q9H7X2 142 aa26.53■■□□□ 1.84
COL23A1-201ENST00000390654 PLEKHF1Q96S99 279 aa26.52■■□□□ 1.84
COL23A1-201ENST00000390654 POGZQ7Z3K3 1410 aa26.52■■□□□ 1.84
COL23A1-201ENST00000390654 ADGRB3O60242 1522 aa26.52■■□□□ 1.84
COL23A1-201ENST00000390654 ADGRB1O14514 1584 aa26.52■■□□□ 1.84
COL23A1-201ENST00000390654 FYB1O15117 783 aa26.51■■□□□ 1.83
COL23A1-201ENST00000390654 DDX19BQ9UMR2 479 aa26.51■■□□□ 1.83
COL23A1-201ENST00000390654 FOXD4L1Q9NU39 408 aa26.5■■□□□ 1.83
COL23A1-201ENST00000390654 VIRMAQ69YN4 1812 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms