RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 FBLN1P23142 703 aa18.05■□□□□ 0.48
PSME4-201ENST00000389993 THUMPD2Q9BTF0 503 aaKnown RBP18.05■□□□□ 0.48
PSME4-201ENST00000389993 ABCC5O15440 1437 aa18.05■□□□□ 0.48
PSME4-201ENST00000389993 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
PSME4-201ENST00000389993 MIA2Q96PC5 1412 aa18.04■□□□□ 0.48
PSME4-201ENST00000389993 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
PSME4-201ENST00000389993 GBP4Q96PP9 640 aa18.04■□□□□ 0.48
PSME4-201ENST00000389993 RAD21O60216 631 aa18.03■□□□□ 0.48
PSME4-201ENST00000389993 FBXW7Q969H0 707 aa18.03■□□□□ 0.48
PSME4-201ENST00000389993 THOC2Q8NI27 1593 aaKnown RBP18.03■□□□□ 0.48
PSME4-201ENST00000389993 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
PSME4-201ENST00000389993 DDX19BQ9UMR2 479 aa18.02■□□□□ 0.48
PSME4-201ENST00000389993 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.48
PSME4-201ENST00000389993 DCTN1Q14203 1278 aa18.01■□□□□ 0.47
PSME4-201ENST00000389993 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
PSME4-201ENST00000389993 DDX54Q8TDD1 881 aaKnown RBP18.01■□□□□ 0.47
PSME4-201ENST00000389993 PIP4K2BP78356 416 aa18■□□□□ 0.47
PSME4-201ENST00000389993 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
PSME4-201ENST00000389993 KLHL34Q8N239 644 aa18■□□□□ 0.47
PSME4-201ENST00000389993 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
PSME4-201ENST00000389993 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
PSME4-201ENST00000389993 MAP4K4O95819 1239 aaPredicted RBP18■□□□□ 0.47
PSME4-201ENST00000389993 CUL7Q14999 1698 aa17.99■□□□□ 0.47
PSME4-201ENST00000389993 GNAI1P63096 354 aa17.99■□□□□ 0.47
PSME4-201ENST00000389993 BRD4O60885 1362 aaPredicted RBP17.99■□□□□ 0.47
PSME4-201ENST00000389993 NEUROD6Q96NK8 337 aa17.99■□□□□ 0.47
PSME4-201ENST00000389993 IFIT2P09913 472 aaKnown RBP17.98■□□□□ 0.47
PSME4-201ENST00000389993 MSNP26038 577 aaKnown RBP17.98■□□□□ 0.47
PSME4-201ENST00000389993 ZC3H6P61129 1189 aaKnown RBP17.98■□□□□ 0.47
PSME4-201ENST00000389993 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
PSME4-201ENST00000389993 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
PSME4-201ENST00000389993 APPP05067 770 aa17.98■□□□□ 0.47
PSME4-201ENST00000389993 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
PSME4-201ENST00000389993 DIAPH3Q9NSV4 1193 aa17.98■□□□□ 0.47
PSME4-201ENST00000389993 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
PSME4-201ENST00000389993 CD109Q6YHK3 1445 aa17.98■□□□□ 0.47
PSME4-201ENST00000389993 FYB1O15117 783 aa17.97■□□□□ 0.47
PSME4-201ENST00000389993 MYL6BP14649 208 aa17.97■□□□□ 0.47
PSME4-201ENST00000389993 ST18O60284 1047 aa17.96■□□□□ 0.47
PSME4-201ENST00000389993 KIF14Q15058 1648 aa17.96■□□□□ 0.47
PSME4-201ENST00000389993 RTEL1-TNFRSF6BF6WH68 1400 aa17.95■□□□□ 0.46
PSME4-201ENST00000389993 MCTP1Q6DN14 999 aa17.95■□□□□ 0.46
PSME4-201ENST00000389993 NSD3Q9BZ95 1437 aa17.95■□□□□ 0.46
PSME4-201ENST00000389993 KIF16BQ96L93 1317 aa17.95■□□□□ 0.46
PSME4-201ENST00000389993 TWISTNBQ3B726 338 aaPredicted RBP17.95■□□□□ 0.46
PSME4-201ENST00000389993 STK11IPQ8N1F8 1099 aa17.94■□□□□ 0.46
PSME4-201ENST00000389993 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
PSME4-201ENST00000389993 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
PSME4-201ENST00000389993 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
PSME4-201ENST00000389993 MTMR7Q9Y216 660 aa17.94■□□□□ 0.46
PSME4-201ENST00000389993 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
PSME4-201ENST00000389993 PDE4CQ08493 712 aa17.93■□□□□ 0.46
PSME4-201ENST00000389993 SIL1Q9H173 461 aa17.93■□□□□ 0.46
PSME4-201ENST00000389993 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
PSME4-201ENST00000389993 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
PSME4-201ENST00000389993 L1TD1Q5T7N2 865 aaKnown RBP17.93■□□□□ 0.46
PSME4-201ENST00000389993 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
PSME4-201ENST00000389993 G3BP1Q13283 466 aaKnown RBP eCLIP17.92■□□□□ 0.467e-7■■■■□ 20.1
PSME4-201ENST00000389993 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
PSME4-201ENST00000389993 NME9Q86XW9 330 aa17.92■□□□□ 0.46
PSME4-201ENST00000389993 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
PSME4-201ENST00000389993 GOLGA6L3A6NEY3 463 aa17.92■□□□□ 0.46
PSME4-201ENST00000389993 MCM10Q7L590 875 aa17.92■□□□□ 0.46
PSME4-201ENST00000389993 RASSF8Q8NHQ8 419 aa17.92■□□□□ 0.46
PSME4-201ENST00000389993 GPRASP1Q5JY77 1395 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 H3BQV1 296 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 C20orf194Q5TEA3 1177 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
PSME4-201ENST00000389993 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 GOLGA6L6A8MZA4 724 aa17.91■□□□□ 0.46
PSME4-201ENST00000389993 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
PSME4-201ENST00000389993 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
PSME4-201ENST00000389993 THEMISQ8N1K5 641 aaPredicted RBP17.9■□□□□ 0.46
PSME4-201ENST00000389993 CCDC85AQ96PX6 553 aaPredicted RBP17.9■□□□□ 0.46
PSME4-201ENST00000389993 IDI1Q13907 227 aa17.89■□□□□ 0.46
PSME4-201ENST00000389993 VPS37DQ86XT2 251 aa17.89■□□□□ 0.45
PSME4-201ENST00000389993 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
PSME4-201ENST00000389993 DDX58O95786 925 aaKnown RBP17.88■□□□□ 0.45
PSME4-201ENST00000389993 GLIPR1L2Q4G1C9 344 aa17.88■□□□□ 0.45
PSME4-201ENST00000389993 DNAJC2Q99543 621 aaKnown RBP17.88■□□□□ 0.45
PSME4-201ENST00000389993 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
PSME4-201ENST00000389993 SURF6O75683 361 aaKnown RBP17.87■□□□□ 0.45
PSME4-201ENST00000389993 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
PSME4-201ENST00000389993 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
PSME4-201ENST00000389993 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
PSME4-201ENST00000389993 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
PSME4-201ENST00000389993 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
PSME4-201ENST00000389993 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
PSME4-201ENST00000389993 SF3A1Q15459 793 aaKnown RBP17.86■□□□□ 0.45
PSME4-201ENST00000389993 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
PSME4-201ENST00000389993 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
PSME4-201ENST00000389993 CHMP4CQ96CF2 233 aa17.86■□□□□ 0.45
PSME4-201ENST00000389993 C22orf23Q9BZE7 217 aa17.85■□□□□ 0.45
PSME4-201ENST00000389993 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
PSME4-201ENST00000389993 DISP3Q9P2K9 1392 aa17.84■□□□□ 0.45
PSME4-201ENST00000389993 CCDC27Q2M243 656 aa17.84■□□□□ 0.45
PSME4-201ENST00000389993 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
PSME4-201ENST00000389993 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms