RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 CDK19Q9BWU1 502 aa16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
PTPRN2-203ENST00000389418 POGZQ7Z3K3 1410 aa16.05■□□□□ 0.16
PTPRN2-203ENST00000389418 CLSTN1O94985 981 aa16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
PTPRN2-203ENST00000389418 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
PTPRN2-203ENST00000389418 ST18O60284 1047 aa16.03■□□□□ 0.16
PTPRN2-203ENST00000389418 KIF16BQ96L93 1317 aa16.03■□□□□ 0.16
PTPRN2-203ENST00000389418 FAM161AQ3B820 660 aa16.03■□□□□ 0.16
PTPRN2-203ENST00000389418 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
PTPRN2-203ENST00000389418 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
PTPRN2-203ENST00000389418 WDR62O43379 1518 aa16.02■□□□□ 0.16
PTPRN2-203ENST00000389418 CCDC184Q52MB2 194 aa16.02■□□□□ 0.15
PTPRN2-203ENST00000389418 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
PTPRN2-203ENST00000389418 NAIPQ13075 1403 aa16.01■□□□□ 0.15
PTPRN2-203ENST00000389418 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
PTPRN2-203ENST00000389418 DAPK1P53355 1430 aa16.01■□□□□ 0.15
PTPRN2-203ENST00000389418 DZIP1LQ8IYY4 767 aaKnown RBP16.01■□□□□ 0.15
PTPRN2-203ENST00000389418 SUPT6HQ7KZ85 1726 aaKnown RBP16.01■□□□□ 0.15
PTPRN2-203ENST00000389418 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
PTPRN2-203ENST00000389418 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
PTPRN2-203ENST00000389418 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
PTPRN2-203ENST00000389418 ANKLE2Q86XL3 938 aa16■□□□□ 0.15
PTPRN2-203ENST00000389418 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
PTPRN2-203ENST00000389418 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
PTPRN2-203ENST00000389418 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
PTPRN2-203ENST00000389418 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
PTPRN2-203ENST00000389418 CHAF1AQ13111 956 aaPredicted RBP15.98■□□□□ 0.15
PTPRN2-203ENST00000389418 HSP90AB4PQ58FF6 505 aa15.98■□□□□ 0.15
PTPRN2-203ENST00000389418 MAP3K1Q13233 1512 aa15.98■□□□□ 0.15
PTPRN2-203ENST00000389418 RAD21O60216 631 aa15.98■□□□□ 0.15
PTPRN2-203ENST00000389418 RUFY2Q8WXA3 655 aa15.98■□□□□ 0.15
PTPRN2-203ENST00000389418 LNPKQ9C0E8 428 aa15.97■□□□□ 0.15
PTPRN2-203ENST00000389418 FBXW7Q969H0 707 aa15.96■□□□□ 0.15
PTPRN2-203ENST00000389418 IDI1Q13907 227 aa15.96■□□□□ 0.14
PTPRN2-203ENST00000389418 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.14
PTPRN2-203ENST00000389418 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.14
PTPRN2-203ENST00000389418 FOXO3O43524 673 aa15.95■□□□□ 0.14
PTPRN2-203ENST00000389418 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
PTPRN2-203ENST00000389418 ERBINQ96RT1 1412 aa15.95■□□□□ 0.14
PTPRN2-203ENST00000389418 TOM1L2Q6ZVM7 507 aa15.95■□□□□ 0.14
PTPRN2-203ENST00000389418 RIC3Q7Z5B4 369 aa15.94■□□□□ 0.14
PTPRN2-203ENST00000389418 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
PTPRN2-203ENST00000389418 REC8O95072 547 aa15.94■□□□□ 0.14
PTPRN2-203ENST00000389418 TPM4P67936 248 aa15.94■□□□□ 0.14
PTPRN2-203ENST00000389418 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
PTPRN2-203ENST00000389418 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 PPP1R1BQ9UD71 204 aaPredicted RBP15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 DRC7Q8IY82 874 aa15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 MSNP26038 577 aaKnown RBP15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
PTPRN2-203ENST00000389418 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
PTPRN2-203ENST00000389418 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
PTPRN2-203ENST00000389418 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
PTPRN2-203ENST00000389418 ATP6V1DQ9Y5K8 247 aa15.92■□□□□ 0.14
PTPRN2-203ENST00000389418 FBLN1P23142 703 aa15.91■□□□□ 0.14
PTPRN2-203ENST00000389418 CPLX2Q6PUV4 134 aaKnown RBP15.91■□□□□ 0.14
PTPRN2-203ENST00000389418 WWC1Q8IX03 1113 aa15.91■□□□□ 0.14
PTPRN2-203ENST00000389418 APPP05067 770 aa15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 G3BP1Q13283 466 aaKnown RBP eCLIP15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 IFIT2P09913 472 aaKnown RBP15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 NOL10Q9BSC4 688 aaKnown RBP15.9■□□□□ 0.14
PTPRN2-203ENST00000389418 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 ZKSCAN1P17029 563 aaPredicted RBP15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 AMOTL1Q8IY63 956 aa15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 ADAMTS2O95450 1211 aa15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 USHBP1Q8N6Y0 703 aa15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 VPS37DQ86XT2 251 aa15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
PTPRN2-203ENST00000389418 PHF14O94880 888 aa15.88■□□□□ 0.13
PTPRN2-203ENST00000389418 RTEL1-TNFRSF6BF6WH68 1400 aa15.88■□□□□ 0.13
PTPRN2-203ENST00000389418 KIF14Q15058 1648 aa15.88■□□□□ 0.13
PTPRN2-203ENST00000389418 BCAR3O75815 825 aa15.88■□□□□ 0.13
PTPRN2-203ENST00000389418 UGGT2Q9NYU1 1516 aa15.88■□□□□ 0.13
PTPRN2-203ENST00000389418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.87■□□□□ 0.13
PTPRN2-203ENST00000389418 KIAA2012Q0VF49 1180 aa15.87■□□□□ 0.13
PTPRN2-203ENST00000389418 SYNE3Q6ZMZ3 975 aa15.87■□□□□ 0.13
PTPRN2-203ENST00000389418 DCTN1Q14203 1278 aa15.87■□□□□ 0.13
PTPRN2-203ENST00000389418 PPP6R1Q9UPN7 881 aa15.87■□□□□ 0.13
PTPRN2-203ENST00000389418 ATP10BO94823 1461 aa15.87■□□□□ 0.13
PTPRN2-203ENST00000389418 MYL6BP14649 208 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 RNF20Q5VTR2 975 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms