RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
MT-TS1-201ENST00000387416 DLC1Q96QB1 1528 aa12.27□□□□□ -0.44
MT-TS1-201ENST00000387416 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.44
MT-TS1-201ENST00000387416 PRAM1Q96QH2 718 aa12.26□□□□□ -0.45
MT-TS1-201ENST00000387416 COL16A1Q07092 1604 aaPredicted RBP12.26□□□□□ -0.45
MT-TS1-201ENST00000387416 ESCO1Q5FWF5 840 aa12.25□□□□□ -0.45
MT-TS1-201ENST00000387416 ADGRB1O14514 1584 aa12.25□□□□□ -0.45
MT-TS1-201ENST00000387416 NPHP3Q7Z494 1330 aa12.24□□□□□ -0.45
MT-TS1-201ENST00000387416 ORAI2Q96SN7 254 aa12.24□□□□□ -0.45
MT-TS1-201ENST00000387416 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
MT-TS1-201ENST00000387416 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
MT-TS1-201ENST00000387416 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
MT-TS1-201ENST00000387416 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
MT-TS1-201ENST00000387416 EIF3AQ14152 1382 aaKnown RBP12.23□□□□□ -0.45
MT-TS1-201ENST00000387416 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
MT-TS1-201ENST00000387416 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
MT-TS1-201ENST00000387416 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
MT-TS1-201ENST00000387416 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
MT-TS1-201ENST00000387416 SHPRHQ149N8 1683 aa12.21□□□□□ -0.45
MT-TS1-201ENST00000387416 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
MT-TS1-201ENST00000387416 ILDR2Q71H61 639 aa12.2□□□□□ -0.46
MT-TS1-201ENST00000387416 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
MT-TS1-201ENST00000387416 ANKARQ7Z5J8 1434 aa12.2□□□□□ -0.46
MT-TS1-201ENST00000387416 FOXO3O43524 673 aa12.19□□□□□ -0.46
MT-TS1-201ENST00000387416 PSME1Q06323 249 aa12.19□□□□□ -0.46
MT-TS1-201ENST00000387416 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
MT-TS1-201ENST00000387416 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
MT-TS1-201ENST00000387416 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
MT-TS1-201ENST00000387416 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
MT-TS1-201ENST00000387416 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
MT-TS1-201ENST00000387416 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 KIF1AQ12756 1690 aa12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 SOCS7O14512 581 aa12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 ZNF772Q68DY9 489 aaPredicted RBP12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
MT-TS1-201ENST00000387416 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 RGS17Q9UGC6 210 aaPredicted RBP12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 TONSLQ96HA7 1378 aa12.15□□□□□ -0.46
MT-TS1-201ENST00000387416 CENPJQ9HC77 1338 aaPredicted RBP12.14□□□□□ -0.47
MT-TS1-201ENST00000387416 ARHGEF28Q8N1W1 1705 aaKnown RBP12.14□□□□□ -0.47
MT-TS1-201ENST00000387416 PXDNQ92626 1479 aa12.14□□□□□ -0.47
MT-TS1-201ENST00000387416 SPATA31A3Q5VYP0 1347 aa12.13□□□□□ -0.47
MT-TS1-201ENST00000387416 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
MT-TS1-201ENST00000387416 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
MT-TS1-201ENST00000387416 SBNO1A3KN83 1393 aa12.13□□□□□ -0.47
MT-TS1-201ENST00000387416 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
MT-TS1-201ENST00000387416 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
MT-TS1-201ENST00000387416 LRP6O75581 1613 aa12.12□□□□□ -0.47
MT-TS1-201ENST00000387416 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
MT-TS1-201ENST00000387416 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
MT-TS1-201ENST00000387416 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
MT-TS1-201ENST00000387416 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
MT-TS1-201ENST00000387416 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
MT-TS1-201ENST00000387416 ARHGEF10O15013 1369 aa12.11□□□□□ -0.47
MT-TS1-201ENST00000387416 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
MT-TS1-201ENST00000387416 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
MT-TS1-201ENST00000387416 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
MT-TS1-201ENST00000387416 POTEAQ6S8J7 498 aa12.1□□□□□ -0.47
MT-TS1-201ENST00000387416 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
MT-TS1-201ENST00000387416 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
MT-TS1-201ENST00000387416 COL22A1Q8NFW1 1626 aaPredicted RBP12.1□□□□□ -0.47
MT-TS1-201ENST00000387416 PRR36Q9H6K5 1346 aa12.1□□□□□ -0.47
MT-TS1-201ENST00000387416 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
MT-TS1-201ENST00000387416 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
MT-TS1-201ENST00000387416 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
MT-TS1-201ENST00000387416 AFF2P51816 1311 aa12.09□□□□□ -0.47
MT-TS1-201ENST00000387416 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
MT-TS1-201ENST00000387416 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 CARD11Q9BXL7 1154 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 ITSN1Q15811 1721 aa12.08□□□□□ -0.48
MT-TS1-201ENST00000387416 RXRBP28702 533 aa12.07□□□□□ -0.48
MT-TS1-201ENST00000387416 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
MT-TS1-201ENST00000387416 ATP7BP35670 1465 aa12.07□□□□□ -0.48
MT-TS1-201ENST00000387416 BRD4O60885 1362 aaPredicted RBP12.06□□□□□ -0.48
MT-TS1-201ENST00000387416 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
MT-TS1-201ENST00000387416 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
MT-TS1-201ENST00000387416 QTRT2Q9H974 415 aaKnown RBP12.06□□□□□ -0.48
MT-TS1-201ENST00000387416 POLR3AO14802 1390 aaPredicted RBP12.05□□□□□ -0.48
MT-TS1-201ENST00000387416 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
MT-TS1-201ENST00000387416 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
MT-TS1-201ENST00000387416 SBNO2Q9Y2G9 1366 aa12.05□□□□□ -0.48
MT-TS1-201ENST00000387416 USP21Q9UK80 565 aa12.04□□□□□ -0.48
MT-TS1-201ENST00000387416 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
MT-TS1-201ENST00000387416 ACEP12821 1306 aa12.04□□□□□ -0.48
MT-TS1-201ENST00000387416 QRICH2Q9H0J4 1663 aa12.03□□□□□ -0.48
MT-TS1-201ENST00000387416 CDK12Q9NYV4 1490 aaPredicted RBP12.03□□□□□ -0.48
MT-TS1-201ENST00000387416 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
MT-TS1-201ENST00000387416 PUS7Q96PZ0 661 aaKnown RBP12.03□□□□□ -0.48
MT-TS1-201ENST00000387416 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms