RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 CFAP70Q5T0N1 1121 aa26.68■■□□□ 1.86
CD9-204ENST00000382519 WAPLQ7Z5K2 1190 aa26.68■■□□□ 1.86
CD9-204ENST00000382519 PLEKHH1Q9ULM0 1364 aa26.67■■□□□ 1.86
CD9-204ENST00000382519 MEX3CQ5U5Q3 659 aaKnown RBP26.66■■□□□ 1.86
CD9-204ENST00000382519 ORAI2Q96SN7 254 aa26.65■■□□□ 1.86
CD9-204ENST00000382519 DHX57Q6P158 1386 aaKnown RBP26.65■■□□□ 1.86
CD9-204ENST00000382519 FMN2Q9NZ56 1722 aa26.63■■□□□ 1.85
CD9-204ENST00000382519 LRRC59Q96AG4 307 aaKnown RBP26.63■■□□□ 1.85
CD9-204ENST00000382519 KDM2AQ9Y2K7 1162 aa26.63■■□□□ 1.85
CD9-204ENST00000382519 DCAF11Q8TEB1 546 aa26.62■■□□□ 1.85
CD9-204ENST00000382519 NUTM2BA6NNL0 878 aaPredicted RBP26.61■■□□□ 1.85
CD9-204ENST00000382519 NUTM2EB1AL46 878 aaPredicted RBP26.61■■□□□ 1.85
CD9-204ENST00000382519 NUTM2AQ8IVF1 878 aaPredicted RBP26.61■■□□□ 1.85
CD9-204ENST00000382519 POTEAQ6S8J7 498 aa26.6■■□□□ 1.85
CD9-204ENST00000382519 ADGRB1O14514 1584 aa26.59■■□□□ 1.85
CD9-204ENST00000382519 PNPLA6Q8IY17 1366 aa26.58■■□□□ 1.85
CD9-204ENST00000382519 NUTM2FA1L443 756 aa26.58■■□□□ 1.85
CD9-204ENST00000382519 ESCO1Q5FWF5 840 aa26.58■■□□□ 1.85
CD9-204ENST00000382519 DLC1Q96QB1 1528 aa26.57■■□□□ 1.84
CD9-204ENST00000382519 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
CD9-204ENST00000382519 SAFB2Q14151 953 aaKnown RBP eCLIP26.55■■□□□ 1.84
CD9-204ENST00000382519 PRAM1Q96QH2 718 aa26.54■■□□□ 1.84
CD9-204ENST00000382519 SOS2Q07890 1332 aaPredicted RBP26.54■■□□□ 1.84
CD9-204ENST00000382519 KIF1AQ12756 1690 aa26.54■■□□□ 1.84
CD9-204ENST00000382519 RGPD8O14715 1765 aaPredicted RBP26.53■■□□□ 1.84
CD9-204ENST00000382519 NPHP3Q7Z494 1330 aa26.52■■□□□ 1.84
CD9-204ENST00000382519 STAC3Q96MF2 364 aa26.52■■□□□ 1.84
CD9-204ENST00000382519 POGKQ9P215 609 aa26.52■■□□□ 1.84
CD9-204ENST00000382519 TRAK1Q9UPV9 953 aa26.5■■□□□ 1.83
CD9-204ENST00000382519 PXDNQ92626 1479 aa26.49■■□□□ 1.83
CD9-204ENST00000382519 ADGRB2O60241 1585 aa26.49■■□□□ 1.83
CD9-204ENST00000382519 COL22A1Q8NFW1 1626 aaPredicted RBP26.48■■□□□ 1.83
CD9-204ENST00000382519 FOXO3O43524 673 aa26.48■■□□□ 1.83
CD9-204ENST00000382519 XPCQ01831 940 aaPredicted RBP26.48■■□□□ 1.83
CD9-204ENST00000382519 ZNF772Q68DY9 489 aaPredicted RBP26.48■■□□□ 1.83
CD9-204ENST00000382519 ARHGEF28Q8N1W1 1705 aaKnown RBP26.47■■□□□ 1.83
CD9-204ENST00000382519 KIAA1210Q9ULL0 1709 aa26.45■■□□□ 1.82
CD9-204ENST00000382519 AFF2P51816 1311 aa26.44■■□□□ 1.82
CD9-204ENST00000382519 C8orf37Q96NL8 207 aa26.44■■□□□ 1.82
CD9-204ENST00000382519 USP32Q8NFA0 1604 aa26.43■■□□□ 1.82
CD9-204ENST00000382519 ADAMTS2O95450 1211 aa26.42■■□□□ 1.82
CD9-204ENST00000382519 MINK1Q8N4C8 1332 aaPredicted RBP26.41■■□□□ 1.82
CD9-204ENST00000382519 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
CD9-204ENST00000382519 PHF8Q9UPP1 1060 aa26.39■■□□□ 1.82
CD9-204ENST00000382519 ANKARQ7Z5J8 1434 aa26.39■■□□□ 1.81
CD9-204ENST00000382519 MARF1Q9Y4F3 1742 aaKnown RBP26.38■■□□□ 1.81
CD9-204ENST00000382519 EIF3AQ14152 1382 aaKnown RBP26.35■■□□□ 1.81
CD9-204ENST00000382519 TULP4Q9NRJ4 1543 aa26.35■■□□□ 1.81
CD9-204ENST00000382519 NGLY1Q96IV0 654 aa26.35■■□□□ 1.81
CD9-204ENST00000382519 KRT28Q7Z3Y7 464 aa26.34■■□□□ 1.81
CD9-204ENST00000382519 RXRBP28702 533 aa26.33■■□□□ 1.81
CD9-204ENST00000382519 SPATA31A3Q5VYP0 1347 aa26.32■■□□□ 1.8
CD9-204ENST00000382519 TNS3Q68CZ2 1445 aa26.31■■□□□ 1.8
CD9-204ENST00000382519 ITSN1Q15811 1721 aa26.31■■□□□ 1.8
CD9-204ENST00000382519 WASLO00401 505 aaPredicted RBP26.3■■□□□ 1.8
CD9-204ENST00000382519 PSME1Q06323 249 aa26.3■■□□□ 1.8
CD9-204ENST00000382519 PMFBP1Q8TBY8 1022 aa26.3■■□□□ 1.8
CD9-204ENST00000382519 SIN3AQ96ST3 1273 aa26.3■■□□□ 1.8
CD9-204ENST00000382519 NBPF1Q3BBV0 1214 aa26.28■■□□□ 1.8
CD9-204ENST00000382519 PRR36Q9H6K5 1346 aa26.28■■□□□ 1.8
CD9-204ENST00000382519 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
CD9-204ENST00000382519 L3MBTL2Q969R5 705 aa26.27■■□□□ 1.8
CD9-204ENST00000382519 QTRT2Q9H974 415 aaKnown RBP26.27■■□□□ 1.8
CD9-204ENST00000382519 CDK12Q9NYV4 1490 aaPredicted RBP26.27■■□□□ 1.8
CD9-204ENST00000382519 ABCA3Q99758 1704 aa26.26■■□□□ 1.79
CD9-204ENST00000382519 TRPM3Q9HCF6 1732 aaPredicted RBP26.26■■□□□ 1.79
CD9-204ENST00000382519 SBNO1A3KN83 1393 aa26.26■■□□□ 1.79
CD9-204ENST00000382519 USP21Q9UK80 565 aa26.26■■□□□ 1.79
CD9-204ENST00000382519 LMOD2Q6P5Q4 547 aa26.25■■□□□ 1.79
CD9-204ENST00000382519 ATP7BP35670 1465 aa26.24■■□□□ 1.79
CD9-204ENST00000382519 TRPM1Q7Z4N2 1603 aa26.24■■□□□ 1.79
CD9-204ENST00000382519 PLEKHG5O94827 1062 aa26.23■■□□□ 1.79
CD9-204ENST00000382519 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
CD9-204ENST00000382519 RBM6P78332 1123 aaKnown RBP26.23■■□□□ 1.79
CD9-204ENST00000382519 ARHGEF10O15013 1369 aa26.22■■□□□ 1.79
CD9-204ENST00000382519 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
CD9-204ENST00000382519 QRICH2Q9H0J4 1663 aa26.22■■□□□ 1.79
CD9-204ENST00000382519 FNBP4Q8N3X1 1017 aaPredicted RBP26.21■■□□□ 1.79
CD9-204ENST00000382519 TOPAZ1Q8N9V7 1692 aa26.21■■□□□ 1.79
CD9-204ENST00000382519 RGS12O14924 1447 aa26.21■■□□□ 1.79
CD9-204ENST00000382519 ALS2Q96Q42 1657 aa26.2■■□□□ 1.78
CD9-204ENST00000382519 TRPC5Q9UL62 973 aaPredicted RBP26.2■■□□□ 1.78
CD9-204ENST00000382519 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.19■■□□□ 1.78
CD9-204ENST00000382519 ATRNO75882 1429 aa26.18■■□□□ 1.78
CD9-204ENST00000382519 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
CD9-204ENST00000382519 NGDNQ8NEJ9 315 aaKnown RBP26.18■■□□□ 1.78
CD9-204ENST00000382519 CABLES1Q8TDN4 633 aa26.18■■□□□ 1.78
CD9-204ENST00000382519 NUDT16Q96DE0 195 aaKnown RBP26.18■■□□□ 1.78
CD9-204ENST00000382519 CDK19Q9BWU1 502 aa26.18■■□□□ 1.78
CD9-204ENST00000382519 CENPJQ9HC77 1338 aaPredicted RBP26.17■■□□□ 1.78
CD9-204ENST00000382519 BCL9LQ86UU0 1499 aa26.17■■□□□ 1.78
CD9-204ENST00000382519 PLCH1Q4KWH8 1693 aa26.16■■□□□ 1.78
CD9-204ENST00000382519 SLIT2O94813 1529 aa26.13■■□□□ 1.77
CD9-204ENST00000382519 ROCK2O75116 1388 aaKnown RBP26.12■■□□□ 1.77
CD9-204ENST00000382519 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
CD9-204ENST00000382519 NWD2Q9ULI1 1742 aa26.11■■□□□ 1.77
CD9-204ENST00000382519 CRYBG1Q9Y4K1 1723 aa26.11■■□□□ 1.77
CD9-204ENST00000382519 SRPK2P78362 688 aaKnown RBP26.09■■□□□ 1.77
CD9-204ENST00000382519 CCDC61Q9Y6R9 512 aa26.08■■□□□ 1.77
CD9-204ENST00000382519 UNC5CLQ8IV45 518 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms