RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 IFT172Q9UG01 1749 aa34.07■■■■□ 3.05
VLDLR-201ENST00000382096 MYOM2P54296 1465 aa34.02■■■■□ 3.04
VLDLR-201ENST00000382096 PXDNQ92626 1479 aa34.02■■■■□ 3.04
VLDLR-201ENST00000382096 KNDC1Q76NI1 1749 aa34.01■■■■□ 3.04
VLDLR-201ENST00000382096 USP21Q9UK80 565 aa34.01■■■■□ 3.03
VLDLR-201ENST00000382096 FNBP4Q8N3X1 1017 aaPredicted RBP34■■■■□ 3.03
VLDLR-201ENST00000382096 TECPR2O15040 1411 aa33.99■■■■□ 3.03
VLDLR-201ENST00000382096 NPHP3Q7Z494 1330 aa33.99■■■■□ 3.03
VLDLR-201ENST00000382096 EP400Q96L91 3159 aa33.99■■■■□ 3.03
VLDLR-201ENST00000382096 ATRNO75882 1429 aa33.98■■■■□ 3.03
VLDLR-201ENST00000382096 TRPC5Q9UL62 973 aaPredicted RBP33.98■■■■□ 3.03
VLDLR-201ENST00000382096 ATAD2Q6PL18 1390 aa33.98■■■■□ 3.03
VLDLR-201ENST00000382096 ESCO1Q5FWF5 840 aa33.95■■■■□ 3.03
VLDLR-201ENST00000382096 ADGRF5Q8IZF2 1346 aa33.95■■■■□ 3.03
VLDLR-201ENST00000382096 CCDC144AA2RUR9 1427 aa33.95■■■■□ 3.02
VLDLR-201ENST00000382096 SPATA31E1Q6ZUB1 1445 aa33.95■■■■□ 3.02
VLDLR-201ENST00000382096 FMN2Q9NZ56 1722 aa33.93■■■■□ 3.02
VLDLR-201ENST00000382096 FOXD1Q16676 465 aa33.92■■■■□ 3.02
VLDLR-201ENST00000382096 SRCAPQ6ZRS2 3230 aa33.91■■■■□ 3.02
VLDLR-201ENST00000382096 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.91■■■■□ 3.02
VLDLR-201ENST00000382096 LRPPRCP42704 1394 aaKnown RBP33.9■■■■□ 3.02
VLDLR-201ENST00000382096 ANKRD30BQ9BXX2 1392 aa33.9■■■■□ 3.02
VLDLR-201ENST00000382096 KIF1AQ12756 1690 aa33.9■■■■□ 3.02
VLDLR-201ENST00000382096 BCL9LQ86UU0 1499 aa33.89■■■■□ 3.02
VLDLR-201ENST00000382096 ABCC11Q96J66 1382 aa33.87■■■■□ 3.01
VLDLR-201ENST00000382096 FOXO3O43524 673 aa33.87■■■■□ 3.01
VLDLR-201ENST00000382096 PIK3C2GO75747 1445 aa33.87■■■■□ 3.01
VLDLR-201ENST00000382096 WAPLQ7Z5K2 1190 aa33.84■■■■□ 3.01
VLDLR-201ENST00000382096 STK26Q9P289 416 aa33.84■■■■□ 3.01
VLDLR-201ENST00000382096 XPCQ01831 940 aaPredicted RBP33.83■■■■□ 3.01
VLDLR-201ENST00000382096 RGL3Q3MIN7 710 aa33.83■■■■□ 3.01
VLDLR-201ENST00000382096 PLEKHH1Q9ULM0 1364 aa33.82■■■■□ 3
VLDLR-201ENST00000382096 RGPD8O14715 1765 aaPredicted RBP33.81■■■■□ 3
VLDLR-201ENST00000382096 YTHDC2Q9H6S0 1430 aaKnown RBP33.79■■■■□ 3
VLDLR-201ENST00000382096 NUTM2FA1L443 756 aa33.78■■■■□ 3
VLDLR-201ENST00000382096 TMEM132EQ6IEE7 984 aa33.78■■■■□ 3
VLDLR-201ENST00000382096 MPHOSPH9Q99550 1183 aa33.77■■■■□ 3
VLDLR-201ENST00000382096 USP32Q8NFA0 1604 aa33.77■■■■□ 3
VLDLR-201ENST00000382096 SLIT2O94813 1529 aa33.75■■■□□ 2.99
VLDLR-201ENST00000382096 GLI3P10071 1580 aa33.74■■■□□ 2.99
VLDLR-201ENST00000382096 GJD4Q96KN9 370 aaPredicted RBP33.74■■■□□ 2.99
VLDLR-201ENST00000382096 SPATA31A3Q5VYP0 1347 aa33.74■■■□□ 2.99
VLDLR-201ENST00000382096 ACIN1Q9UKV3 1341 aaKnown RBP33.74■■■□□ 2.99
VLDLR-201ENST00000382096 NRXN1Q9ULB1 1477 aa33.71■■■□□ 2.99
VLDLR-201ENST00000382096 CCDC125Q86Z20 511 aa33.71■■■□□ 2.99
VLDLR-201ENST00000382096 SIRT1Q96EB6 747 aa33.71■■■□□ 2.99
VLDLR-201ENST00000382096 BRWD3Q6RI45 1802 aa33.7■■■□□ 2.99
VLDLR-201ENST00000382096 ABCA3Q99758 1704 aa33.7■■■□□ 2.98
VLDLR-201ENST00000382096 RALGAPBQ86X10 1494 aa33.69■■■□□ 2.98
VLDLR-201ENST00000382096 PLCH1Q4KWH8 1693 aa33.68■■■□□ 2.98
VLDLR-201ENST00000382096 NWD2Q9ULI1 1742 aa33.67■■■□□ 2.98
VLDLR-201ENST00000382096 UNC5CLQ8IV45 518 aa33.67■■■□□ 2.98
VLDLR-201ENST00000382096 TNS3Q68CZ2 1445 aa33.66■■■□□ 2.98
VLDLR-201ENST00000382096 KRT28Q7Z3Y7 464 aa33.65■■■□□ 2.98
VLDLR-201ENST00000382096 C14orf93Q9H972 538 aaKnown RBP33.65■■■□□ 2.98
VLDLR-201ENST00000382096 ZRANB1Q9UGI0 708 aa33.64■■■□□ 2.98
VLDLR-201ENST00000382096 PHF8Q9UPP1 1060 aa33.61■■■□□ 2.97
VLDLR-201ENST00000382096 DHX57Q6P158 1386 aaKnown RBP33.6■■■□□ 2.97
VLDLR-201ENST00000382096 DLC1Q96QB1 1528 aa33.58■■■□□ 2.97
VLDLR-201ENST00000382096 ADGRB2O60241 1585 aa33.58■■■□□ 2.97
VLDLR-201ENST00000382096 SBNO1A3KN83 1393 aa33.58■■■□□ 2.97
VLDLR-201ENST00000382096 BLMP54132 1417 aaPredicted RBP33.57■■■□□ 2.96
VLDLR-201ENST00000382096 PSME1Q06323 249 aa33.57■■■□□ 2.96
VLDLR-201ENST00000382096 CFAP70Q5T0N1 1121 aa33.56■■■□□ 2.96
VLDLR-201ENST00000382096 ANKARQ7Z5J8 1434 aa33.53■■■□□ 2.96
VLDLR-201ENST00000382096 TRPM3Q9HCF6 1732 aaPredicted RBP33.53■■■□□ 2.96
VLDLR-201ENST00000382096 ARHGEF10O15013 1369 aa33.53■■■□□ 2.96
VLDLR-201ENST00000382096 RAB3GAP2Q9H2M9 1393 aa33.52■■■□□ 2.96
VLDLR-201ENST00000382096 HAP1P54257 671 aaPredicted RBP33.52■■■□□ 2.96
VLDLR-201ENST00000382096 PRAM1Q96QH2 718 aa33.52■■■□□ 2.96
VLDLR-201ENST00000382096 VPS72Q15906 364 aa33.51■■■□□ 2.95
VLDLR-201ENST00000382096 CABLES1Q8TDN4 633 aa33.51■■■□□ 2.95
VLDLR-201ENST00000382096 ADGRB1O14514 1584 aa33.51■■■□□ 2.95
VLDLR-201ENST00000382096 NRAPQ86VF7 1730 aa33.5■■■□□ 2.95
VLDLR-201ENST00000382096 ALS2Q96Q42 1657 aa33.48■■■□□ 2.95
VLDLR-201ENST00000382096 SAFB2Q14151 953 aaKnown RBP eCLIP33.47■■■□□ 2.95
VLDLR-201ENST00000382096 ONECUT3O60422 494 aaPredicted RBP33.46■■■□□ 2.95
VLDLR-201ENST00000382096 SEPT12Q8IYM1 358 aa33.46■■■□□ 2.95
VLDLR-201ENST00000382096 LMOD2Q6P5Q4 547 aa33.42■■■□□ 2.94
VLDLR-201ENST00000382096 POGKQ9P215 609 aa33.42■■■□□ 2.94
VLDLR-201ENST00000382096 CRYBG1Q9Y4K1 1723 aa33.42■■■□□ 2.94
VLDLR-201ENST00000382096 COL14A1Q05707 1796 aaKnown RBP33.41■■■□□ 2.94
VLDLR-201ENST00000382096 PMFBP1Q8TBY8 1022 aa33.4■■■□□ 2.94
VLDLR-201ENST00000382096 TULP4Q9NRJ4 1543 aa33.39■■■□□ 2.94
VLDLR-201ENST00000382096 PLEKHG5O94827 1062 aa33.39■■■□□ 2.94
VLDLR-201ENST00000382096 FAM83GA6ND36 823 aa33.38■■■□□ 2.93
VLDLR-201ENST00000382096 DEFB132Q7Z7B7 95 aa33.38■■■□□ 2.93
VLDLR-201ENST00000382096 CCDC9Q9Y3X0 531 aaKnown RBP33.38■■■□□ 2.93
VLDLR-201ENST00000382096 EIF3AQ14152 1382 aaKnown RBP33.36■■■□□ 2.93
VLDLR-201ENST00000382096 SF3B2Q13435 895 aaKnown RBP33.36■■■□□ 2.93
VLDLR-201ENST00000382096 KRT27Q7Z3Y8 459 aa33.36■■■□□ 2.93
VLDLR-201ENST00000382096 HRCP23327 699 aa33.35■■■□□ 2.93
VLDLR-201ENST00000382096 ITSN1Q15811 1721 aa33.33■■■□□ 2.93
VLDLR-201ENST00000382096 LRP5O75197 1615 aa33.33■■■□□ 2.93
VLDLR-201ENST00000382096 GPRASP1Q5JY77 1395 aa33.33■■■□□ 2.93
VLDLR-201ENST00000382096 PRR36Q9H6K5 1346 aa33.32■■■□□ 2.93
VLDLR-201ENST00000382096 HIRIP3Q9BW71 556 aaPredicted RBP33.32■■■□□ 2.92
VLDLR-201ENST00000382096 TRAK1Q9UPV9 953 aa33.32■■■□□ 2.92
VLDLR-201ENST00000382096 ARHGEF28Q8N1W1 1705 aaKnown RBP33.31■■■□□ 2.92
VLDLR-201ENST00000382096 RGPD1P0DJD0 1748 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms