RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 ZNF428Q96B54 188 aa18.5■□□□□ 0.55
TUSC3-201ENST00000382020 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
TUSC3-201ENST00000382020 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
TUSC3-201ENST00000382020 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
TUSC3-201ENST00000382020 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
TUSC3-201ENST00000382020 CLCN1P35523 988 aa18.48■□□□□ 0.55
TUSC3-201ENST00000382020 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
TUSC3-201ENST00000382020 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
TUSC3-201ENST00000382020 DDX19BQ9UMR2 479 aa18.47■□□□□ 0.55
TUSC3-201ENST00000382020 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
TUSC3-201ENST00000382020 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
TUSC3-201ENST00000382020 PRAG1Q86YV5 1406 aa18.46■□□□□ 0.55
TUSC3-201ENST00000382020 DDX11L8A8MPP1 907 aa18.46■□□□□ 0.55
TUSC3-201ENST00000382020 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
TUSC3-201ENST00000382020 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
TUSC3-201ENST00000382020 NSD3Q9BZ95 1437 aa18.44■□□□□ 0.54
TUSC3-201ENST00000382020 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
TUSC3-201ENST00000382020 TRIM27P14373 513 aa18.43■□□□□ 0.54
TUSC3-201ENST00000382020 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
TUSC3-201ENST00000382020 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
TUSC3-201ENST00000382020 ESF1Q9H501 851 aaKnown RBP18.42■□□□□ 0.54
TUSC3-201ENST00000382020 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
TUSC3-201ENST00000382020 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
TUSC3-201ENST00000382020 WDR62O43379 1518 aa18.42■□□□□ 0.54
TUSC3-201ENST00000382020 DIAPH1O60610 1272 aaKnown RBP18.42■□□□□ 0.54
TUSC3-201ENST00000382020 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
TUSC3-201ENST00000382020 DCTN1Q14203 1278 aa18.42■□□□□ 0.54
TUSC3-201ENST00000382020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.41■□□□□ 0.54
TUSC3-201ENST00000382020 TBC1D32Q96NH3 1257 aa18.41■□□□□ 0.54
TUSC3-201ENST00000382020 CASC1Q6TDU7 716 aa18.41■□□□□ 0.54
TUSC3-201ENST00000382020 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
TUSC3-201ENST00000382020 RILPL2Q969X0 211 aa18.39■□□□□ 0.54
TUSC3-201ENST00000382020 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
TUSC3-201ENST00000382020 EVC2Q86UK5 1308 aa18.38■□□□□ 0.53
TUSC3-201ENST00000382020 SSFA2P28290 1259 aa18.38■□□□□ 0.53
TUSC3-201ENST00000382020 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
TUSC3-201ENST00000382020 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
TUSC3-201ENST00000382020 PBRM1Q86U86 1689 aa18.37■□□□□ 0.53
TUSC3-201ENST00000382020 TPM2P07951 284 aa18.37■□□□□ 0.53
TUSC3-201ENST00000382020 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
TUSC3-201ENST00000382020 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
TUSC3-201ENST00000382020 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
TUSC3-201ENST00000382020 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
TUSC3-201ENST00000382020 KIF14Q15058 1648 aa18.36■□□□□ 0.53
TUSC3-201ENST00000382020 TMPOP42166 694 aaKnown RBP18.36■□□□□ 0.53
TUSC3-201ENST00000382020 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
TUSC3-201ENST00000382020 PRPF40AO75400 957 aaKnown RBP18.36■□□□□ 0.53
TUSC3-201ENST00000382020 SAMD9Q5K651 1589 aa18.35■□□□□ 0.53
TUSC3-201ENST00000382020 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
TUSC3-201ENST00000382020 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
TUSC3-201ENST00000382020 DTNBO60941 627 aa18.35■□□□□ 0.53
TUSC3-201ENST00000382020 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
TUSC3-201ENST00000382020 ATP10BO94823 1461 aa18.35■□□□□ 0.53
TUSC3-201ENST00000382020 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
TUSC3-201ENST00000382020 GCC2Q8IWJ2 1684 aa18.34■□□□□ 0.53
TUSC3-201ENST00000382020 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
TUSC3-201ENST00000382020 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
TUSC3-201ENST00000382020 A2MP01023 1474 aa18.34■□□□□ 0.53
TUSC3-201ENST00000382020 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.53
TUSC3-201ENST00000382020 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
TUSC3-201ENST00000382020 CABP1Q9NZU7 370 aa18.33■□□□□ 0.52
TUSC3-201ENST00000382020 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
TUSC3-201ENST00000382020 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
TUSC3-201ENST00000382020 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
TUSC3-201ENST00000382020 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.32■□□□□ 0.52
TUSC3-201ENST00000382020 DISP1Q96F81 1524 aa18.32■□□□□ 0.52
TUSC3-201ENST00000382020 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
TUSC3-201ENST00000382020 KDM5CP41229 1560 aa18.31■□□□□ 0.52
TUSC3-201ENST00000382020 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
TUSC3-201ENST00000382020 RRS1Q15050 365 aaKnown RBP18.31■□□□□ 0.52
TUSC3-201ENST00000382020 CHAMP1Q96JM3 812 aa18.31■□□□□ 0.52
TUSC3-201ENST00000382020 UQCRHLA0A096LP55 91 aa18.31■□□□□ 0.52
TUSC3-201ENST00000382020 UQCRHP07919 91 aa18.31■□□□□ 0.52
TUSC3-201ENST00000382020 MAGI2Q86UL8 1455 aa18.3■□□□□ 0.52
TUSC3-201ENST00000382020 WDR63Q8IWG1 891 aa18.3■□□□□ 0.52
TUSC3-201ENST00000382020 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
TUSC3-201ENST00000382020 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
TUSC3-201ENST00000382020 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
TUSC3-201ENST00000382020 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
TUSC3-201ENST00000382020 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
TUSC3-201ENST00000382020 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
TUSC3-201ENST00000382020 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
TUSC3-201ENST00000382020 KCNJ4P48050 445 aa18.28■□□□□ 0.52
TUSC3-201ENST00000382020 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
TUSC3-201ENST00000382020 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
TUSC3-201ENST00000382020 C16orf71Q8IYS4 520 aaPredicted RBP18.28■□□□□ 0.52
TUSC3-201ENST00000382020 KIF16BQ96L93 1317 aa18.27■□□□□ 0.52
TUSC3-201ENST00000382020 UHRF1BP1Q6BDS2 1440 aa18.27■□□□□ 0.52
TUSC3-201ENST00000382020 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
TUSC3-201ENST00000382020 RAPGEF3O95398 923 aa18.27■□□□□ 0.52
TUSC3-201ENST00000382020 USP19O94966 1318 aa18.26■□□□□ 0.51
TUSC3-201ENST00000382020 TWISTNBQ3B726 338 aaPredicted RBP18.26■□□□□ 0.51
TUSC3-201ENST00000382020 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
TUSC3-201ENST00000382020 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
TUSC3-201ENST00000382020 ST18O60284 1047 aa18.26■□□□□ 0.51
TUSC3-201ENST00000382020 NEK4P51957 841 aa18.26■□□□□ 0.51
TUSC3-201ENST00000382020 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
TUSC3-201ENST00000382020 GDPD2Q9HCC8 539 aa18.26■□□□□ 0.51
TUSC3-201ENST00000382020 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
TUSC3-201ENST00000382020 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms