RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 DLC1Q96QB1 1528 aa27.78■■■□□ 2.04
GTF3A-201ENST00000381140 CLSPNQ9HAW4 1339 aa27.78■■■□□ 2.04
GTF3A-201ENST00000381140 POGKQ9P215 609 aa27.77■■■□□ 2.04
GTF3A-201ENST00000381140 DCCP43146 1447 aa27.77■■■□□ 2.04
GTF3A-201ENST00000381140 FAM135BQ49AJ0 1406 aa27.77■■■□□ 2.04
GTF3A-201ENST00000381140 NBPF8Q3BBV2 869 aa27.74■■■□□ 2.03
GTF3A-201ENST00000381140 SIRT1Q96EB6 747 aa27.73■■■□□ 2.03
GTF3A-201ENST00000381140 CDC42BPGQ6DT37 1551 aa27.71■■■□□ 2.03
GTF3A-201ENST00000381140 HSPA1LP34931 641 aa27.71■■■□□ 2.03
GTF3A-201ENST00000381140 ROCK2O75116 1388 aaKnown RBP27.7■■■□□ 2.03
GTF3A-201ENST00000381140 MST1RQ04912 1400 aa27.7■■■□□ 2.03
GTF3A-201ENST00000381140 MINK1Q8N4C8 1332 aaPredicted RBP27.67■■■□□ 2.02
GTF3A-201ENST00000381140 FMN2Q9NZ56 1722 aa27.67■■■□□ 2.02
GTF3A-201ENST00000381140 NUTM2FA1L443 756 aa27.66■■■□□ 2.02
GTF3A-201ENST00000381140 HIRIP3Q9BW71 556 aaPredicted RBP27.65■■■□□ 2.02
GTF3A-201ENST00000381140 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
GTF3A-201ENST00000381140 PHLPP1O60346 1717 aa27.64■■■□□ 2.02
GTF3A-201ENST00000381140 C1orf167Q5SNV9 1468 aa27.63■■■□□ 2.01
GTF3A-201ENST00000381140 RALGAPBQ86X10 1494 aa27.62■■■□□ 2.01
GTF3A-201ENST00000381140 BRINP3Q76B58 766 aa27.61■■■□□ 2.01
GTF3A-201ENST00000381140 QRICH2Q9H0J4 1663 aa27.61■■■□□ 2.01
GTF3A-201ENST00000381140 ADGRB2O60241 1585 aa27.6■■■□□ 2.01
GTF3A-201ENST00000381140 CARD11Q9BXL7 1154 aa27.59■■■□□ 2.01
GTF3A-201ENST00000381140 ORAI2Q96SN7 254 aa27.58■■■□□ 2.01
GTF3A-201ENST00000381140 TIMELESSQ9UNS1 1208 aa27.58■■■□□ 2.01
GTF3A-201ENST00000381140 CENPJQ9HC77 1338 aaPredicted RBP27.56■■■□□ 2
GTF3A-201ENST00000381140 ESCO1Q5FWF5 840 aa27.56■■■□□ 2
GTF3A-201ENST00000381140 GPRASP1Q5JY77 1395 aa27.55■■■□□ 2
GTF3A-201ENST00000381140 NHSL1Q5SYE7 1610 aa27.55■■■□□ 2
GTF3A-201ENST00000381140 DDX17Q92841 729 aaKnown RBP27.53■■■□□ 2
GTF3A-201ENST00000381140 AHDC1Q5TGY3 1603 aaPredicted RBP27.53■■■□□ 2
GTF3A-201ENST00000381140 EIF3AQ14152 1382 aaKnown RBP27.52■■■□□ 2
GTF3A-201ENST00000381140 COL16A1Q07092 1604 aaPredicted RBP27.52■■■□□ 2
GTF3A-201ENST00000381140 USP32Q8NFA0 1604 aa27.52■■■□□ 2
GTF3A-201ENST00000381140 WASLO00401 505 aaPredicted RBP27.5■■□□□ 1.99
GTF3A-201ENST00000381140 TULP4Q9NRJ4 1543 aa27.48■■□□□ 1.99
GTF3A-201ENST00000381140 KIF1AQ12756 1690 aa27.47■■□□□ 1.99
GTF3A-201ENST00000381140 CDK19Q9BWU1 502 aa27.46■■□□□ 1.99
GTF3A-201ENST00000381140 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.99
GTF3A-201ENST00000381140 ITSN1Q15811 1721 aa27.45■■□□□ 1.98
GTF3A-201ENST00000381140 PRR36Q9H6K5 1346 aa27.44■■□□□ 1.98
GTF3A-201ENST00000381140 FOXO3O43524 673 aa27.43■■□□□ 1.98
GTF3A-201ENST00000381140 PHF8Q9UPP1 1060 aa27.43■■□□□ 1.98
GTF3A-201ENST00000381140 XPCQ01831 940 aaPredicted RBP27.42■■□□□ 1.98
GTF3A-201ENST00000381140 SRPK2P78362 688 aaKnown RBP27.41■■□□□ 1.98
GTF3A-201ENST00000381140 PMFBP1Q8TBY8 1022 aa27.41■■□□□ 1.98
GTF3A-201ENST00000381140 NPHP3Q7Z494 1330 aa27.39■■□□□ 1.98
GTF3A-201ENST00000381140 NUDT16Q96DE0 195 aaKnown RBP27.39■■□□□ 1.98
GTF3A-201ENST00000381140 ATP7BP35670 1465 aa27.39■■□□□ 1.98
GTF3A-201ENST00000381140 CABP2Q9NPB3 220 aa27.38■■□□□ 1.97
GTF3A-201ENST00000381140 EVC2Q86UK5 1308 aa27.38■■□□□ 1.97
GTF3A-201ENST00000381140 JCADQ9P266 1359 aa27.37■■□□□ 1.97
GTF3A-201ENST00000381140 SHPRHQ149N8 1683 aa27.37■■□□□ 1.97
GTF3A-201ENST00000381140 TOPAZ1Q8N9V7 1692 aa27.37■■□□□ 1.97
GTF3A-201ENST00000381140 USP47Q96K76 1375 aa27.36■■□□□ 1.97
GTF3A-201ENST00000381140 SOS2Q07890 1332 aaPredicted RBP27.35■■□□□ 1.97
GTF3A-201ENST00000381140 ZEB1P37275 1124 aaPredicted RBP27.35■■□□□ 1.97
GTF3A-201ENST00000381140 LRRC59Q96AG4 307 aaKnown RBP27.35■■□□□ 1.97
GTF3A-201ENST00000381140 PXDNQ92626 1479 aa27.34■■□□□ 1.97
GTF3A-201ENST00000381140 ST20-MTHFSA0A0A6YYL1 179 aa27.34■■□□□ 1.97
GTF3A-201ENST00000381140 MED1Q15648 1581 aaPredicted RBP27.32■■□□□ 1.96
GTF3A-201ENST00000381140 PSME1Q06323 249 aa27.32■■□□□ 1.96
GTF3A-201ENST00000381140 KRT28Q7Z3Y7 464 aa27.32■■□□□ 1.96
GTF3A-201ENST00000381140 NGDNQ8NEJ9 315 aaKnown RBP27.31■■□□□ 1.96
GTF3A-201ENST00000381140 SBNO2Q9Y2G9 1366 aa27.3■■□□□ 1.96
GTF3A-201ENST00000381140 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
GTF3A-201ENST00000381140 PPIP5K1Q6PFW1 1433 aa27.28■■□□□ 1.96
GTF3A-201ENST00000381140 PNPLA6Q8IY17 1366 aa27.27■■□□□ 1.96
GTF3A-201ENST00000381140 NUTM2BA6NNL0 878 aaPredicted RBP27.27■■□□□ 1.96
GTF3A-201ENST00000381140 NUTM2EB1AL46 878 aaPredicted RBP27.27■■□□□ 1.96
GTF3A-201ENST00000381140 NUTM2AQ8IVF1 878 aaPredicted RBP27.27■■□□□ 1.96
GTF3A-201ENST00000381140 TESK2Q96S53 571 aa27.24■■□□□ 1.95
GTF3A-201ENST00000381140 TRPM3Q9HCF6 1732 aaPredicted RBP27.24■■□□□ 1.95
GTF3A-201ENST00000381140 LMOD2Q6P5Q4 547 aa27.23■■□□□ 1.95
GTF3A-201ENST00000381140 ACEP12821 1306 aa27.23■■□□□ 1.95
GTF3A-201ENST00000381140 SPATA31A6Q5VVP1 1343 aa27.23■■□□□ 1.95
GTF3A-201ENST00000381140 CABP1Q9NZU7 370 aa27.22■■□□□ 1.95
GTF3A-201ENST00000381140 PLEKHG5O94827 1062 aa27.22■■□□□ 1.95
GTF3A-201ENST00000381140 DISP3Q9P2K9 1392 aa27.21■■□□□ 1.95
GTF3A-201ENST00000381140 PLEKHG3A1L390 1219 aa27.21■■□□□ 1.95
GTF3A-201ENST00000381140 SPATA31A3Q5VYP0 1347 aa27.21■■□□□ 1.95
GTF3A-201ENST00000381140 TNS3Q68CZ2 1445 aa27.2■■□□□ 1.95
GTF3A-201ENST00000381140 LRP6O75581 1613 aa27.2■■□□□ 1.95
GTF3A-201ENST00000381140 PAK3O75914 559 aaPredicted RBP27.2■■□□□ 1.94
GTF3A-201ENST00000381140 ATAD2Q6PL18 1390 aa27.2■■□□□ 1.94
GTF3A-201ENST00000381140 COL22A1Q8NFW1 1626 aaPredicted RBP27.2■■□□□ 1.94
GTF3A-201ENST00000381140 POLR3AO14802 1390 aaPredicted RBP27.19■■□□□ 1.94
GTF3A-201ENST00000381140 MEX3CQ5U5Q3 659 aaKnown RBP27.19■■□□□ 1.94
GTF3A-201ENST00000381140 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
GTF3A-201ENST00000381140 SBNO1A3KN83 1393 aa27.18■■□□□ 1.94
GTF3A-201ENST00000381140 EIF4G2P78344 907 aaKnown RBP eCLIP27.17■■□□□ 1.94
GTF3A-201ENST00000381140 AKAP12Q02952 1782 aa27.16■■□□□ 1.94
GTF3A-201ENST00000381140 ALS2Q96Q42 1657 aa27.16■■□□□ 1.94
GTF3A-201ENST00000381140 TMF1P82094 1093 aa27.16■■□□□ 1.94
GTF3A-201ENST00000381140 TMC1Q8TDI8 760 aa27.16■■□□□ 1.94
GTF3A-201ENST00000381140 HSPA5P11021 654 aaKnown RBP27.15■■□□□ 1.94
GTF3A-201ENST00000381140 SLC24A1O60721 1099 aa27.14■■□□□ 1.94
GTF3A-201ENST00000381140 ADAMTS2O95450 1211 aa27.12■■□□□ 1.93
GTF3A-201ENST00000381140 ARHGEF10O15013 1369 aa27.12■■□□□ 1.93
GTF3A-201ENST00000381140 ABCA3Q99758 1704 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms