RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
PITRM1-202ENST00000380989 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
PITRM1-202ENST00000380989 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
PITRM1-202ENST00000380989 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
PITRM1-202ENST00000380989 NRXN3Q9Y4C0 1643 aa15.47■□□□□ 0.07
PITRM1-202ENST00000380989 SLC4A3P48751 1232 aa15.47■□□□□ 0.07
PITRM1-202ENST00000380989 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
PITRM1-202ENST00000380989 YTHDC2Q9H6S0 1430 aaKnown RBP15.46■□□□□ 0.07
PITRM1-202ENST00000380989 PANK3Q9H999 370 aa15.46■□□□□ 0.07
PITRM1-202ENST00000380989 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.45■□□□□ 0.06
PITRM1-202ENST00000380989 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
PITRM1-202ENST00000380989 POGKQ9P215 609 aa15.45■□□□□ 0.06
PITRM1-202ENST00000380989 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
PITRM1-202ENST00000380989 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
PITRM1-202ENST00000380989 ARHGEF28Q8N1W1 1705 aaKnown RBP15.44■□□□□ 0.06
PITRM1-202ENST00000380989 CEP170BQ9Y4F5 1589 aaPredicted RBP15.43■□□□□ 0.06
PITRM1-202ENST00000380989 KDM4FA0A1W2PPD8 638 aa15.43■□□□□ 0.06
PITRM1-202ENST00000380989 QRICH2Q9H0J4 1663 aa15.43■□□□□ 0.06
PITRM1-202ENST00000380989 NEFMP07197 916 aa15.43■□□□□ 0.06
PITRM1-202ENST00000380989 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
PITRM1-202ENST00000380989 RBM33Q96EV2 1170 aaKnown RBP15.42■□□□□ 0.06
PITRM1-202ENST00000380989 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
PITRM1-202ENST00000380989 CC2D1BQ5T0F9 858 aaKnown RBP15.42■□□□□ 0.06
PITRM1-202ENST00000380989 SETD1AO15047 1707 aaKnown RBP15.42■□□□□ 0.06
PITRM1-202ENST00000380989 ADAMTS13Q76LX8 1427 aa15.42■□□□□ 0.06
PITRM1-202ENST00000380989 HDGFP51858 240 aaKnown RBP15.41■□□□□ 0.06
PITRM1-202ENST00000380989 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
PITRM1-202ENST00000380989 PLIN1O60240 522 aa15.41■□□□□ 0.06
PITRM1-202ENST00000380989 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
PITRM1-202ENST00000380989 HSPA2P54652 639 aa15.4■□□□□ 0.06
PITRM1-202ENST00000380989 NUTM2FA1L443 756 aa15.39■□□□□ 0.05
PITRM1-202ENST00000380989 PER1O15534 1290 aaPredicted RBP15.38■□□□□ 0.05
PITRM1-202ENST00000380989 SRPK2P78362 688 aaKnown RBP15.38■□□□□ 0.05
PITRM1-202ENST00000380989 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
PITRM1-202ENST00000380989 PLEKHG1Q9ULL1 1385 aa15.38■□□□□ 0.05
PITRM1-202ENST00000380989 ARHGAP23Q9P227 1491 aa15.38■□□□□ 0.05
PITRM1-202ENST00000380989 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
PITRM1-202ENST00000380989 SLIT1O75093 1534 aa15.37■□□□□ 0.05
PITRM1-202ENST00000380989 TULP4Q9NRJ4 1543 aa15.37■□□□□ 0.05
PITRM1-202ENST00000380989 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
PITRM1-202ENST00000380989 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
PITRM1-202ENST00000380989 ROBO2Q9HCK4 1378 aa15.36■□□□□ 0.05
PITRM1-202ENST00000380989 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
PITRM1-202ENST00000380989 MYOM1P52179 1685 aa15.35■□□□□ 0.05
PITRM1-202ENST00000380989 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
PITRM1-202ENST00000380989 AMOTL2Q9Y2J4 779 aa15.35■□□□□ 0.05
PITRM1-202ENST00000380989 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
PITRM1-202ENST00000380989 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
PITRM1-202ENST00000380989 SETD1BQ9UPS6 1966 aaKnown RBP15.34■□□□□ 0.05
PITRM1-202ENST00000380989 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
PITRM1-202ENST00000380989 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
PITRM1-202ENST00000380989 CDCA8Q53HL2 280 aa15.33■□□□□ 0.05
PITRM1-202ENST00000380989 CDCA7LQ96GN5 454 aa15.33■□□□□ 0.04
PITRM1-202ENST00000380989 ABCC11Q96J66 1382 aa15.32■□□□□ 0.04
PITRM1-202ENST00000380989 SBNO2Q9Y2G9 1366 aa15.32■□□□□ 0.04
PITRM1-202ENST00000380989 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
PITRM1-202ENST00000380989 KCNA6P17658 529 aa15.32■□□□□ 0.04
PITRM1-202ENST00000380989 PDE4AP27815 886 aa15.3■□□□□ 0.04
PITRM1-202ENST00000380989 KNSTRNQ9Y448 316 aa15.3■□□□□ 0.04
PITRM1-202ENST00000380989 MED14O60244 1454 aa15.3■□□□□ 0.04
PITRM1-202ENST00000380989 ZNF142P52746 1687 aaPredicted RBP15.3■□□□□ 0.04
PITRM1-202ENST00000380989 TBX22Q9Y458 520 aa15.3■□□□□ 0.04
PITRM1-202ENST00000380989 TNNT2P45379 298 aaPredicted RBP15.29■□□□□ 0.04
PITRM1-202ENST00000380989 CABP1Q9NZU7 370 aa15.29■□□□□ 0.04
PITRM1-202ENST00000380989 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
PITRM1-202ENST00000380989 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.03
PITRM1-202ENST00000380989 PNISRQ8TF01 805 aaKnown RBP15.26■□□□□ 0.03
PITRM1-202ENST00000380989 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
PITRM1-202ENST00000380989 WASLO00401 505 aaPredicted RBP15.26■□□□□ 0.03
PITRM1-202ENST00000380989 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.25■□□□□ 0.03
PITRM1-202ENST00000380989 NSD3Q9BZ95 1437 aa15.25■□□□□ 0.03
PITRM1-202ENST00000380989 DLC1Q96QB1 1528 aa15.24■□□□□ 0.03
PITRM1-202ENST00000380989 PRR36Q9H6K5 1346 aa15.24■□□□□ 0.03
PITRM1-202ENST00000380989 NPHP4O75161 1426 aaPredicted RBP15.24■□□□□ 0.03
PITRM1-202ENST00000380989 TECPR2O15040 1411 aa15.23■□□□□ 0.03
PITRM1-202ENST00000380989 A0A1W2PP64 1363 aa15.23■□□□□ 0.03
PITRM1-202ENST00000380989 CPS1P31327 1500 aa15.23■□□□□ 0.03
PITRM1-202ENST00000380989 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
PITRM1-202ENST00000380989 C20orf194Q5TEA3 1177 aa15.23■□□□□ 0.03
PITRM1-202ENST00000380989 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
PITRM1-202ENST00000380989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.22■□□□□ 0.03
PITRM1-202ENST00000380989 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
PITRM1-202ENST00000380989 PARD3Q8TEW0 1356 aa15.22■□□□□ 0.03
PITRM1-202ENST00000380989 ARXQ96QS3 562 aa15.22■□□□□ 0.03
PITRM1-202ENST00000380989 FAM135BQ49AJ0 1406 aa15.21■□□□□ 0.03
PITRM1-202ENST00000380989 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.03
PITRM1-202ENST00000380989 RNF123Q5XPI4 1314 aa15.21■□□□□ 0.02
PITRM1-202ENST00000380989 MYBBP1AQ9BQG0 1328 aaKnown RBP15.21■□□□□ 0.02
PITRM1-202ENST00000380989 FBLN1P23142 703 aa15.2■□□□□ 0.02
PITRM1-202ENST00000380989 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
PITRM1-202ENST00000380989 GGNBP2Q9H3C7 697 aa15.2■□□□□ 0.02
PITRM1-202ENST00000380989 BACH2Q9BYV9 841 aa15.2■□□□□ 0.02
PITRM1-202ENST00000380989 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
PITRM1-202ENST00000380989 RALBP1Q15311 655 aa15.2■□□□□ 0.02
PITRM1-202ENST00000380989 FRAT1Q92837 279 aaPredicted RBP15.19■□□□□ 0.02
PITRM1-202ENST00000380989 RCAN3Q9UKA8 241 aa15.19■□□□□ 0.02
PITRM1-202ENST00000380989 PPIP5K1Q6PFW1 1433 aa15.18■□□□□ 0.02
PITRM1-202ENST00000380989 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
PITRM1-202ENST00000380989 LMTK3Q96Q04 1460 aa15.18■□□□□ 0.02
PITRM1-202ENST00000380989 ATAD2Q6PL18 1390 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms