RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ZNF518AQ6AHZ1 1483 aa15.31■□□□□ 0.04
GABPB1-203ENST00000380877 TRIM6-TRIM34B2RNG4 842 aa15.31■□□□□ 0.04
GABPB1-203ENST00000380877 PDE4AP27815 886 aa15.31■□□□□ 0.04
GABPB1-203ENST00000380877 ANKRD45Q5TZF3 282 aa15.31■□□□□ 0.04
GABPB1-203ENST00000380877 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
GABPB1-203ENST00000380877 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
GABPB1-203ENST00000380877 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-203ENST00000380877 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
GABPB1-203ENST00000380877 PANK1Q8TE04 598 aa15.3■□□□□ 0.04
GABPB1-203ENST00000380877 SCAF11Q99590 1463 aaKnown RBP15.3■□□□□ 0.04
GABPB1-203ENST00000380877 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
GABPB1-203ENST00000380877 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
GABPB1-203ENST00000380877 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
GABPB1-203ENST00000380877 SHANK2Q9UPX8 1470 aa15.29■□□□□ 0.04
GABPB1-203ENST00000380877 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
GABPB1-203ENST00000380877 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
GABPB1-203ENST00000380877 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
GABPB1-203ENST00000380877 FKBP5Q13451 457 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-203ENST00000380877 GPATCH3Q96I76 525 aa15.28■□□□□ 0.04
GABPB1-203ENST00000380877 SLKQ9H2G2 1235 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-203ENST00000380877 TAF7LQ5H9L4 462 aa15.27■□□□□ 0.04
GABPB1-203ENST00000380877 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
GABPB1-203ENST00000380877 SULT6B1Q6IMI4 303 aa15.27■□□□□ 0.04
GABPB1-203ENST00000380877 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.03
GABPB1-203ENST00000380877 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
GABPB1-203ENST00000380877 GAS2L2Q8NHY3 880 aa15.26■□□□□ 0.03
GABPB1-203ENST00000380877 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
GABPB1-203ENST00000380877 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
GABPB1-203ENST00000380877 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
GABPB1-203ENST00000380877 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
GABPB1-203ENST00000380877 NEXNQ0ZGT2 675 aa15.24■□□□□ 0.03
GABPB1-203ENST00000380877 TRIM44Q96DX7 344 aaPredicted RBP15.24■□□□□ 0.03
GABPB1-203ENST00000380877 DNMT1P26358 1616 aaKnown RBP15.24■□□□□ 0.03
GABPB1-203ENST00000380877 RALGAPBQ86X10 1494 aa15.24■□□□□ 0.03
GABPB1-203ENST00000380877 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-203ENST00000380877 AAMPQ13685 434 aa15.23■□□□□ 0.03
GABPB1-203ENST00000380877 ZRSR1Q15695 479 aaKnown RBP15.23■□□□□ 0.03
GABPB1-203ENST00000380877 WDR63Q8IWG1 891 aa15.23■□□□□ 0.03
GABPB1-203ENST00000380877 SMG6Q86US8 1419 aaKnown RBP15.23■□□□□ 0.03
GABPB1-203ENST00000380877 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
GABPB1-203ENST00000380877 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
GABPB1-203ENST00000380877 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
GABPB1-203ENST00000380877 BCAR3O75815 825 aa15.22■□□□□ 0.03
GABPB1-203ENST00000380877 WASLO00401 505 aaPredicted RBP15.21■□□□□ 0.03
GABPB1-203ENST00000380877 DDX58O95786 925 aaKnown RBP15.21■□□□□ 0.03
GABPB1-203ENST00000380877 AMOTL2Q9Y2J4 779 aa15.21■□□□□ 0.03
GABPB1-203ENST00000380877 PZPP20742 1482 aa15.21■□□□□ 0.02
GABPB1-203ENST00000380877 FCHSD2O94868 740 aa15.2■□□□□ 0.02
GABPB1-203ENST00000380877 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
GABPB1-203ENST00000380877 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
GABPB1-203ENST00000380877 ADGRL2O95490 1459 aa15.19■□□□□ 0.02
GABPB1-203ENST00000380877 PLEKHO1Q53GL0 409 aaPredicted RBP15.19■□□□□ 0.02
GABPB1-203ENST00000380877 WWC1Q8IX03 1113 aa15.18■□□□□ 0.02
GABPB1-203ENST00000380877 NME9Q86XW9 330 aa15.18■□□□□ 0.02
GABPB1-203ENST00000380877 RILPL2Q969X0 211 aa15.18■□□□□ 0.02
GABPB1-203ENST00000380877 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
GABPB1-203ENST00000380877 SYTL4Q96C24 671 aaPredicted RBP15.18■□□□□ 0.02
GABPB1-203ENST00000380877 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
GABPB1-203ENST00000380877 TNRQ92752 1358 aa15.18■□□□□ 0.02
GABPB1-203ENST00000380877 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
GABPB1-203ENST00000380877 TMPOP42166 694 aaKnown RBP15.17■□□□□ 0.02
GABPB1-203ENST00000380877 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
GABPB1-203ENST00000380877 CT47B1P0C2W7 299 aaPredicted RBP15.16■□□□□ 0.02
GABPB1-203ENST00000380877 XPCQ01831 940 aaPredicted RBP15.16■□□□□ 0.02
GABPB1-203ENST00000380877 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
GABPB1-203ENST00000380877 PTMAP06454 111 aaKnown RBP15.15■□□□□ 0.02
GABPB1-203ENST00000380877 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
GABPB1-203ENST00000380877 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
GABPB1-203ENST00000380877 TESK2Q96S53 571 aa15.14■□□□□ 0.01
GABPB1-203ENST00000380877 AIMP1Q12904 312 aaKnown RBP15.14■□□□□ 0.01
GABPB1-203ENST00000380877 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
GABPB1-203ENST00000380877 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
GABPB1-203ENST00000380877 ZNF530Q6P9A1 599 aaPredicted RBP15.13■□□□□ 0.01
GABPB1-203ENST00000380877 UHRF1BP1LA0JNW5 1464 aa15.13■□□□□ 0.01
GABPB1-203ENST00000380877 EMILIN1Q9Y6C2 1016 aa15.13■□□□□ 0.01
GABPB1-203ENST00000380877 ST18O60284 1047 aa15.13■□□□□ 0.01
GABPB1-203ENST00000380877 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
GABPB1-203ENST00000380877 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
GABPB1-203ENST00000380877 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
GABPB1-203ENST00000380877 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
GABPB1-203ENST00000380877 PLCB2Q00722 1185 aa15.12■□□□□ 0.01
GABPB1-203ENST00000380877 RIC3Q7Z5B4 369 aa15.12■□□□□ 0.01
GABPB1-203ENST00000380877 RBM33Q96EV2 1170 aaKnown RBP15.12■□□□□ 0.01
GABPB1-203ENST00000380877 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
GABPB1-203ENST00000380877 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
GABPB1-203ENST00000380877 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
GABPB1-203ENST00000380877 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
GABPB1-203ENST00000380877 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-203ENST00000380877 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
GABPB1-203ENST00000380877 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
GABPB1-203ENST00000380877 NSD2O96028 1365 aa15.11■□□□□ 0.01
GABPB1-203ENST00000380877 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
GABPB1-203ENST00000380877 GNAI3P08754 354 aa15.1■□□□□ 0.01
GABPB1-203ENST00000380877 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
GABPB1-203ENST00000380877 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
GABPB1-203ENST00000380877 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
GABPB1-203ENST00000380877 ATP7AQ04656 1500 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 G3BP1Q13283 466 aaKnown RBP eCLIP15.09■□□□□ 0.01
GABPB1-203ENST00000380877 ABCA8O94911 1581 aa15.09■□□□□ 0.01
GABPB1-203ENST00000380877 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms