RNA–Protein interactions for RNA: ENST00000380579.5

TRAPPC2-203, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-203ENST00000380579 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
TRAPPC2-203ENST00000380579 FAM69CQ0P6D2 419 aa11.25□□□□□ -0.61
TRAPPC2-203ENST00000380579 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
TRAPPC2-203ENST00000380579 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC2-203ENST00000380579 CD46P15529 392 aa11.25□□□□□ -0.61
TRAPPC2-203ENST00000380579 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
TRAPPC2-203ENST00000380579 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC2-203ENST00000380579 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
TRAPPC2-203ENST00000380579 SOCS7O14512 581 aa11.24□□□□□ -0.61
TRAPPC2-203ENST00000380579 OATP04181 439 aa11.24□□□□□ -0.61
TRAPPC2-203ENST00000380579 BACH2Q9BYV9 841 aa11.24□□□□□ -0.61
TRAPPC2-203ENST00000380579 IRX6P78412 446 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC2-203ENST00000380579 FBXO33Q7Z6M2 555 aa11.23□□□□□ -0.61
TRAPPC2-203ENST00000380579 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
TRAPPC2-203ENST00000380579 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
TRAPPC2-203ENST00000380579 ATP9BO43861 1147 aa11.22□□□□□ -0.61
TRAPPC2-203ENST00000380579 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
TRAPPC2-203ENST00000380579 MARCH6O60337 910 aa11.22□□□□□ -0.61
TRAPPC2-203ENST00000380579 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC2-203ENST00000380579 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
TRAPPC2-203ENST00000380579 DIXDC1Q155Q3 683 aa11.22□□□□□ -0.61
TRAPPC2-203ENST00000380579 LGR5O75473 907 aa11.21□□□□□ -0.61
TRAPPC2-203ENST00000380579 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.62
TRAPPC2-203ENST00000380579 UBE2Q2Q8WVN8 375 aa11.21□□□□□ -0.62
TRAPPC2-203ENST00000380579 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.62
TRAPPC2-203ENST00000380579 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
TRAPPC2-203ENST00000380579 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC2-203ENST00000380579 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC2-203ENST00000380579 RAB11FIP3O75154 756 aa11.19□□□□□ -0.62
TRAPPC2-203ENST00000380579 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
TRAPPC2-203ENST00000380579 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
TRAPPC2-203ENST00000380579 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
TRAPPC2-203ENST00000380579 FAM161BQ96MY7 647 aa11.18□□□□□ -0.62
TRAPPC2-203ENST00000380579 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRAPPC2-203ENST00000380579 DHX38Q92620 1227 aaKnown RBP11.18□□□□□ -0.62
TRAPPC2-203ENST00000380579 TMEM121BQ9BXQ6 578 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC2-203ENST00000380579 FAM198AQ9UFP1 575 aa11.18□□□□□ -0.62
TRAPPC2-203ENST00000380579 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 LDLRAD1Q5T700 205 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 ERCC3P19447 782 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 HDLBPQ00341 1268 aaKnown RBP11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 NR6A1Q15406 480 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 LNPKQ9C0E8 428 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
TRAPPC2-203ENST00000380579 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 ABL1P00519 1130 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 TUSC1Q2TAM9 212 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 B4GALNT3Q6L9W6 998 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 MICAL1Q8TDZ2 1067 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
TRAPPC2-203ENST00000380579 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.63
TRAPPC2-203ENST00000380579 PHF14O94880 888 aa11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 CANXP27824 592 aaKnown RBP11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 ZNF326Q5BKZ1 582 aaKnown RBP11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 PER1O15534 1290 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 RAD51AP2Q09MP3 1159 aa11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 IQSEC3Q9UPP2 1182 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC2-203ENST00000380579 H3BRB1 525 aa11.13□□□□□ -0.63
TRAPPC2-203ENST00000380579 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
TRAPPC2-203ENST00000380579 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
TRAPPC2-203ENST00000380579 TUT1Q9H6E5 874 aaKnown RBP11.13□□□□□ -0.63
TRAPPC2-203ENST00000380579 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
TRAPPC2-203ENST00000380579 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L21D6R901 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 KCNH2Q12809 1159 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 SBNO2Q9Y2G9 1366 aa11.12□□□□□ -0.63
TRAPPC2-203ENST00000380579 PIK3R5Q8WYR1 880 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 PIF1Q9H611 641 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 CAPN12Q6ZSI9 719 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 TANGO6Q9C0B7 1094 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 TTC13Q8NBP0 860 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 SYMPKQ92797 1274 aaKnown RBP11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 ZBTB3Q9H5J0 574 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 SLC52A1Q9NWF4 448 aa11.11□□□□□ -0.63
TRAPPC2-203ENST00000380579 VAMP1P23763 118 aa11.1□□□□□ -0.63
TRAPPC2-203ENST00000380579 KLHL42Q9P2K6 505 aa11.1□□□□□ -0.63
TRAPPC2-203ENST00000380579 USP17L5A8MUK1 530 aa11.1□□□□□ -0.63
TRAPPC2-203ENST00000380579 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
TRAPPC2-203ENST00000380579 TNNI2P48788 182 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms