RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
CHD3-203ENST00000380358 SSR1P43307 286 aaKnown RBP14.99□□□□□ -0.01
CHD3-203ENST00000380358 TSPYL1Q9H0U9 437 aa14.99□□□□□ -0.01
CHD3-203ENST00000380358 SMC2O95347 1197 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 CA8P35219 290 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 GRM1Q13255 1194 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 MPNDQ8N594 471 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 TANGO6Q9C0B7 1094 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 RNF214Q8ND24 703 aa14.98□□□□□ -0.01
CHD3-203ENST00000380358 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
CHD3-203ENST00000380358 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
CHD3-203ENST00000380358 GOLGA3Q08378 1498 aa14.97□□□□□ -0.01
CHD3-203ENST00000380358 AXDND1Q5T1B0 1012 aaPredicted RBP14.96□□□□□ -0.01
CHD3-203ENST00000380358 BICDL1Q6ZP65 573 aa14.96□□□□□ -0.01
CHD3-203ENST00000380358 FAM177A1Q8N128 213 aaPredicted RBP14.96□□□□□ -0.01
CHD3-203ENST00000380358 RAPGEF4Q8WZA2 1011 aa14.96□□□□□ -0.01
CHD3-203ENST00000380358 CCDC73Q6ZRK6 1079 aa14.96□□□□□ -0.01
CHD3-203ENST00000380358 TMEM87AQ8NBN3 555 aa14.96□□□□□ -0.01
CHD3-203ENST00000380358 RDXP35241 583 aaKnown RBP14.96□□□□□ -0.01
CHD3-203ENST00000380358 HSP90B2PQ58FF3 399 aa14.96□□□□□ -0.01
CHD3-203ENST00000380358 PANK3Q9H999 370 aa14.96□□□□□ -0.01
CHD3-203ENST00000380358 RNF20Q5VTR2 975 aa14.96□□□□□ -0.02
CHD3-203ENST00000380358 FAM193AP78312 1265 aa14.95□□□□□ -0.02
CHD3-203ENST00000380358 RALBP1Q15311 655 aa14.95□□□□□ -0.02
CHD3-203ENST00000380358 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
CHD3-203ENST00000380358 MAP4K4O95819 1239 aaPredicted RBP14.95□□□□□ -0.02
CHD3-203ENST00000380358 SSBP05455 408 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHD3-203ENST00000380358 TRMT1LQ7Z2T5 733 aaKnown RBP14.95□□□□□ -0.02
CHD3-203ENST00000380358 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
CHD3-203ENST00000380358 PODXL2Q9NZ53 605 aa14.95□□□□□ -0.02
CHD3-203ENST00000380358 CGNL1Q0VF96 1302 aa14.95□□□□□ -0.02
CHD3-203ENST00000380358 DCAF1Q9Y4B6 1507 aa14.94□□□□□ -0.02
CHD3-203ENST00000380358 STK3Q13188 491 aa14.94□□□□□ -0.02
CHD3-203ENST00000380358 MAGEC2Q9UBF1 373 aaPredicted RBP14.94□□□□□ -0.02
CHD3-203ENST00000380358 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
CHD3-203ENST00000380358 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
CHD3-203ENST00000380358 RIPK4P57078 832 aa14.94□□□□□ -0.02
CHD3-203ENST00000380358 DDX54Q8TDD1 881 aaKnown RBP14.93□□□□□ -0.02
CHD3-203ENST00000380358 LNPKQ9C0E8 428 aa14.93□□□□□ -0.02
CHD3-203ENST00000380358 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
CHD3-203ENST00000380358 SPC24Q8NBT2 197 aa14.93□□□□□ -0.02
CHD3-203ENST00000380358 CNNM1Q9NRU3 951 aa14.93□□□□□ -0.02
CHD3-203ENST00000380358 HSP90AB4PQ58FF6 505 aa14.93□□□□□ -0.02
CHD3-203ENST00000380358 ZKSCAN2Q63HK3 967 aa14.92□□□□□ -0.02
CHD3-203ENST00000380358 PUS7Q96PZ0 661 aaKnown RBP14.92□□□□□ -0.02
CHD3-203ENST00000380358 XBP1P17861 261 aa14.92□□□□□ -0.02
CHD3-203ENST00000380358 SCLT1Q96NL6 688 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 DCTN1Q14203 1278 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 EXOC6Q8TAG9 804 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 ZRSR2Q15696 482 aaKnown RBP14.91□□□□□ -0.02
CHD3-203ENST00000380358 NUP133Q8WUM0 1156 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 TTLL12Q14166 644 aaPredicted RBP14.91□□□□□ -0.02
CHD3-203ENST00000380358 EFCAB2Q5VUJ9 269 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 SIL1Q9H173 461 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 USP5P45974 858 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 TAF3Q5VWG9 929 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 KIF6Q6ZMV9 814 aa14.91□□□□□ -0.02
CHD3-203ENST00000380358 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
CHD3-203ENST00000380358 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
CHD3-203ENST00000380358 DEF6Q9H4E7 631 aa14.89□□□□□ -0.03
CHD3-203ENST00000380358 KIF27Q86VH2 1401 aa14.89□□□□□ -0.03
CHD3-203ENST00000380358 APAF1O14727 1248 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 REC8O95072 547 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 LIG1P18858 919 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 MYO6Q9UM54 1294 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 ACBD3Q9H3P7 528 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 CCDC181Q5TID7 509 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 TBC1D2BQ9UPU7 963 aa14.88□□□□□ -0.03
CHD3-203ENST00000380358 CT47B1P0C2W7 299 aaPredicted RBP14.87□□□□□ -0.03
CHD3-203ENST00000380358 NOM1Q5C9Z4 860 aaKnown RBP14.87□□□□□ -0.03
CHD3-203ENST00000380358 ARGLU1Q9NWB6 273 aaPredicted RBP14.87□□□□□ -0.03
CHD3-203ENST00000380358 ZNF76P36508 570 aa14.87□□□□□ -0.03
CHD3-203ENST00000380358 RSPH4AQ5TD94 716 aa14.87□□□□□ -0.03
CHD3-203ENST00000380358 MYL6BP14649 208 aa14.86□□□□□ -0.03
CHD3-203ENST00000380358 TRIM5Q9C035 493 aa14.86□□□□□ -0.03
CHD3-203ENST00000380358 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
CHD3-203ENST00000380358 DIAPH1O60610 1272 aaKnown RBP14.85□□□□□ -0.03
CHD3-203ENST00000380358 ESCO1Q5FWF5 840 aa14.85□□□□□ -0.03
CHD3-203ENST00000380358 C1orf115Q9H7X2 142 aa14.85□□□□□ -0.03
CHD3-203ENST00000380358 SERPINA10Q9UK55 444 aa14.85□□□□□ -0.03
CHD3-203ENST00000380358 ERC2O15083 957 aa14.84□□□□□ -0.03
CHD3-203ENST00000380358 PDE4AP27815 886 aa14.84□□□□□ -0.03
CHD3-203ENST00000380358 E9PSI1 815 aa14.83□□□□□ -0.03
CHD3-203ENST00000380358 SLC3A2P08195 630 aaKnown RBP14.83□□□□□ -0.03
CHD3-203ENST00000380358 UBTFL1P0CB47 393 aaPredicted RBP14.83□□□□□ -0.03
CHD3-203ENST00000380358 TXLNAP40222 546 aa14.83□□□□□ -0.03
CHD3-203ENST00000380358 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
CHD3-203ENST00000380358 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
CHD3-203ENST00000380358 ST20-MTHFSA0A0A6YYL1 179 aa14.83□□□□□ -0.04
CHD3-203ENST00000380358 RBM10P98175 930 aaKnown RBP14.83□□□□□ -0.04
CHD3-203ENST00000380358 WWC3Q9ULE0 1092 aa14.82□□□□□ -0.04
CHD3-203ENST00000380358 FILIP1LQ4L180 1135 aa14.82□□□□□ -0.04
CHD3-203ENST00000380358 NFKBIBQ15653 356 aa14.82□□□□□ -0.04
CHD3-203ENST00000380358 COMMD10Q9Y6G5 202 aa14.82□□□□□ -0.04
CHD3-203ENST00000380358 DHX8Q14562 1220 aaKnown RBP14.82□□□□□ -0.04
CHD3-203ENST00000380358 GSE1Q14687 1217 aa14.82□□□□□ -0.04
CHD3-203ENST00000380358 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
CHD3-203ENST00000380358 LRRFIP2Q9Y608 721 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms