RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ADGRF5Q8IZF2 1346 aa34.53■■■■□ 3.12
U2AF1-202ENST00000380276 ESCO1Q5FWF5 840 aa34.52■■■■□ 3.12
U2AF1-202ENST00000380276 RGS12O14924 1447 aa34.52■■■■□ 3.12
U2AF1-202ENST00000380276 CDC42BPGQ6DT37 1551 aa34.48■■■■□ 3.11
U2AF1-202ENST00000380276 NUTM2FA1L443 756 aa34.46■■■■□ 3.11
U2AF1-202ENST00000380276 MPHOSPH9Q99550 1183 aa34.46■■■■□ 3.11
U2AF1-202ENST00000380276 USP21Q9UK80 565 aa34.45■■■■□ 3.11
U2AF1-202ENST00000380276 NPHP3Q7Z494 1330 aa34.45■■■■□ 3.11
U2AF1-202ENST00000380276 WAPLQ7Z5K2 1190 aa34.44■■■■□ 3.1
U2AF1-202ENST00000380276 XPCQ01831 940 aaPredicted RBP34.43■■■■□ 3.1
U2AF1-202ENST00000380276 ANKRD30BQ9BXX2 1392 aa34.42■■■■□ 3.1
U2AF1-202ENST00000380276 IFT172Q9UG01 1749 aa34.41■■■■□ 3.1
U2AF1-202ENST00000380276 SPATA31E1Q6ZUB1 1445 aa34.41■■■■□ 3.1
U2AF1-202ENST00000380276 TMEM132EQ6IEE7 984 aa34.41■■■■□ 3.1
U2AF1-202ENST00000380276 LRPPRCP42704 1394 aaKnown RBP34.39■■■■□ 3.1
U2AF1-202ENST00000380276 FOXO3O43524 673 aa34.39■■■■□ 3.1
U2AF1-202ENST00000380276 TRPC5Q9UL62 973 aaPredicted RBP34.39■■■■□ 3.1
U2AF1-202ENST00000380276 COL22A1Q8NFW1 1626 aaPredicted RBP34.39■■■■□ 3.1
U2AF1-202ENST00000380276 PXDNQ92626 1479 aa34.35■■■■□ 3.09
U2AF1-202ENST00000380276 TECPR2O15040 1411 aa34.35■■■■□ 3.09
U2AF1-202ENST00000380276 KNDC1Q76NI1 1749 aa34.35■■■■□ 3.09
U2AF1-202ENST00000380276 PLEKHH1Q9ULM0 1364 aa34.35■■■■□ 3.09
U2AF1-202ENST00000380276 MYOM2P54296 1465 aa34.33■■■■□ 3.09
U2AF1-202ENST00000380276 PIK3C2GO75747 1445 aa34.32■■■■□ 3.08
U2AF1-202ENST00000380276 ABCC11Q96J66 1382 aa34.32■■■■□ 3.08
U2AF1-202ENST00000380276 FNBP4Q8N3X1 1017 aaPredicted RBP34.31■■■■□ 3.08
U2AF1-202ENST00000380276 YTHDC2Q9H6S0 1430 aaKnown RBP34.3■■■■□ 3.08
U2AF1-202ENST00000380276 ATAD2Q6PL18 1390 aa34.29■■■■□ 3.08
U2AF1-202ENST00000380276 ATRNO75882 1429 aa34.28■■■■□ 3.08
U2AF1-202ENST00000380276 FMN2Q9NZ56 1722 aa34.27■■■■□ 3.08
U2AF1-202ENST00000380276 MARF1Q9Y4F3 1742 aaKnown RBP34.26■■■■□ 3.07
U2AF1-202ENST00000380276 KIF1AQ12756 1690 aa34.23■■■■□ 3.07
U2AF1-202ENST00000380276 CFAP70Q5T0N1 1121 aa34.2■■■■□ 3.07
U2AF1-202ENST00000380276 PLEKHG5O94827 1062 aa34.19■■■■□ 3.06
U2AF1-202ENST00000380276 SAFB2Q14151 953 aaKnown RBP eCLIP34.19■■■■□ 3.06
U2AF1-202ENST00000380276 DHX57Q6P158 1386 aaKnown RBP34.19■■■■□ 3.06
U2AF1-202ENST00000380276 BCL9LQ86UU0 1499 aa34.19■■■■□ 3.06
U2AF1-202ENST00000380276 HAP1P54257 671 aaPredicted RBP34.18■■■■□ 3.06
U2AF1-202ENST00000380276 KRT28Q7Z3Y7 464 aa34.18■■■■□ 3.06
U2AF1-202ENST00000380276 C14orf93Q9H972 538 aaKnown RBP34.18■■■■□ 3.06
U2AF1-202ENST00000380276 SPATA31A3Q5VYP0 1347 aa34.17■■■■□ 3.06
U2AF1-202ENST00000380276 ACIN1Q9UKV3 1341 aaKnown RBP34.17■■■■□ 3.06
U2AF1-202ENST00000380276 RGPD8O14715 1765 aaPredicted RBP34.14■■■■□ 3.06
U2AF1-202ENST00000380276 SIRT1Q96EB6 747 aa34.14■■■■□ 3.06
U2AF1-202ENST00000380276 GJD4Q96KN9 370 aaPredicted RBP34.14■■■■□ 3.06
U2AF1-202ENST00000380276 PHF8Q9UPP1 1060 aa34.14■■■■□ 3.06
U2AF1-202ENST00000380276 PRAM1Q96QH2 718 aa34.13■■■■□ 3.05
U2AF1-202ENST00000380276 LMOD2Q6P5Q4 547 aa34.11■■■■□ 3.05
U2AF1-202ENST00000380276 POGKQ9P215 609 aa34.11■■■■□ 3.05
U2AF1-202ENST00000380276 NRXN1Q9ULB1 1477 aa34.11■■■■□ 3.05
U2AF1-202ENST00000380276 PSME1Q06323 249 aa34.1■■■■□ 3.05
U2AF1-202ENST00000380276 UNC5CLQ8IV45 518 aa34.09■■■■□ 3.05
U2AF1-202ENST00000380276 USP32Q8NFA0 1604 aa34.08■■■■□ 3.05
U2AF1-202ENST00000380276 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.08■■■■□ 3.05
U2AF1-202ENST00000380276 TNS3Q68CZ2 1445 aa34.08■■■■□ 3.05
U2AF1-202ENST00000380276 RAB3GAP2Q9H2M9 1393 aa34.07■■■■□ 3.04
U2AF1-202ENST00000380276 CABLES1Q8TDN4 633 aa34.05■■■■□ 3.04
U2AF1-202ENST00000380276 SLIT2O94813 1529 aa34.04■■■■□ 3.04
U2AF1-202ENST00000380276 RALGAPBQ86X10 1494 aa34.03■■■■□ 3.04
U2AF1-202ENST00000380276 PMFBP1Q8TBY8 1022 aa34.02■■■■□ 3.04
U2AF1-202ENST00000380276 CCDC9Q9Y3X0 531 aaKnown RBP34.01■■■■□ 3.03
U2AF1-202ENST00000380276 GLI3P10071 1580 aa34.01■■■■□ 3.03
U2AF1-202ENST00000380276 TRAK1Q9UPV9 953 aa34■■■■□ 3.03
U2AF1-202ENST00000380276 KDM2AQ9Y2K7 1162 aa34■■■■□ 3.03
U2AF1-202ENST00000380276 DLC1Q96QB1 1528 aa33.99■■■■□ 3.03
U2AF1-202ENST00000380276 HIRIP3Q9BW71 556 aaPredicted RBP33.98■■■■□ 3.03
U2AF1-202ENST00000380276 ZRANB1Q9UGI0 708 aa33.98■■■■□ 3.03
U2AF1-202ENST00000380276 SBNO1A3KN83 1393 aa33.98■■■■□ 3.03
U2AF1-202ENST00000380276 CCDC125Q86Z20 511 aa33.97■■■■□ 3.03
U2AF1-202ENST00000380276 ARHGEF10O15013 1369 aa33.97■■■■□ 3.03
U2AF1-202ENST00000380276 PLCH1Q4KWH8 1693 aa33.96■■■■□ 3.03
U2AF1-202ENST00000380276 ANKARQ7Z5J8 1434 aa33.96■■■■□ 3.03
U2AF1-202ENST00000380276 MINK1Q8N4C8 1332 aaPredicted RBP33.95■■■■□ 3.03
U2AF1-202ENST00000380276 ABCA3Q99758 1704 aa33.94■■■■□ 3.02
U2AF1-202ENST00000380276 DCAF11Q8TEB1 546 aa33.93■■■■□ 3.02
U2AF1-202ENST00000380276 ADGRB2O60241 1585 aa33.93■■■■□ 3.02
U2AF1-202ENST00000380276 ADGRB1O14514 1584 aa33.92■■■■□ 3.02
U2AF1-202ENST00000380276 VPS72Q15906 364 aa33.9■■■■□ 3.02
U2AF1-202ENST00000380276 SEPT12Q8IYM1 358 aa33.9■■■■□ 3.02
U2AF1-202ENST00000380276 BRWD3Q6RI45 1802 aa33.9■■■■□ 3.02
U2AF1-202ENST00000380276 A0A0G2JS52 829 aa33.89■■■■□ 3.02
U2AF1-202ENST00000380276 MYT1Q01538 1121 aa33.89■■■■□ 3.02
U2AF1-202ENST00000380276 NWD2Q9ULI1 1742 aa33.89■■■■□ 3.02
U2AF1-202ENST00000380276 EIF3AQ14152 1382 aaKnown RBP33.87■■■■□ 3.01
U2AF1-202ENST00000380276 GPRASP1Q5JY77 1395 aa33.87■■■■□ 3.01
U2AF1-202ENST00000380276 EP400Q96L91 3159 aa33.86■■■■□ 3.01
U2AF1-202ENST00000380276 SF3B2Q13435 895 aaKnown RBP33.86■■■■□ 3.01
U2AF1-202ENST00000380276 BLMP54132 1417 aaPredicted RBP33.86■■■■□ 3.01
U2AF1-202ENST00000380276 TULP4Q9NRJ4 1543 aa33.84■■■■□ 3.01
U2AF1-202ENST00000380276 FAM83GA6ND36 823 aa33.83■■■■□ 3.01
U2AF1-202ENST00000380276 TRPM3Q9HCF6 1732 aaPredicted RBP33.82■■■■□ 3
U2AF1-202ENST00000380276 PRR36Q9H6K5 1346 aa33.81■■■■□ 3
U2AF1-202ENST00000380276 WASLO00401 505 aaPredicted RBP33.81■■■■□ 3
U2AF1-202ENST00000380276 NGDNQ8NEJ9 315 aaKnown RBP33.81■■■■□ 3
U2AF1-202ENST00000380276 PAK3O75914 559 aaPredicted RBP33.8■■■■□ 3
U2AF1-202ENST00000380276 DEFB132Q7Z7B7 95 aa33.79■■■■□ 3
U2AF1-202ENST00000380276 KRT27Q7Z3Y8 459 aa33.78■■■■□ 3
U2AF1-202ENST00000380276 BTG4Q9NY30 223 aa33.78■■■■□ 3
U2AF1-202ENST00000380276 ALS2Q96Q42 1657 aa33.77■■■■□ 3
U2AF1-202ENST00000380276 NRAPQ86VF7 1730 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms