RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
NFX1-203ENST00000379540 WDR7Q9Y4E6 1490 aa9.25□□□□□ -0.93
NFX1-203ENST00000379540 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
NFX1-203ENST00000379540 DIAPH1O60610 1272 aaKnown RBP9.25□□□□□ -0.93
NFX1-203ENST00000379540 PSME1Q06323 249 aa9.25□□□□□ -0.93
NFX1-203ENST00000379540 B4GALNT3Q6L9W6 998 aa9.25□□□□□ -0.93
NFX1-203ENST00000379540 CEP89Q96ST8 783 aa9.25□□□□□ -0.93
NFX1-203ENST00000379540 RALGAPBQ86X10 1494 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 POGZQ7Z3K3 1410 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 MARCH6O60337 910 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 POLR1AO95602 1720 aaPredicted RBP9.24□□□□□ -0.93
NFX1-203ENST00000379540 USP47Q96K76 1375 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 SLC4A10Q6U841 1118 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 RASSF8Q8NHQ8 419 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 CCDC47Q96A33 483 aaKnown RBP9.24□□□□□ -0.93
NFX1-203ENST00000379540 RTEL1-TNFRSF6BF6WH68 1400 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 CENPQQ7L2Z9 268 aaPredicted RBP9.24□□□□□ -0.93
NFX1-203ENST00000379540 RAPGEF4Q8WZA2 1011 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 DDX19BQ9UMR2 479 aa9.24□□□□□ -0.93
NFX1-203ENST00000379540 GNAI1P63096 354 aa9.23□□□□□ -0.93
NFX1-203ENST00000379540 NAP1L5Q96NT1 182 aaPredicted RBP9.23□□□□□ -0.93
NFX1-203ENST00000379540 IQGAP3Q86VI3 1631 aa9.23□□□□□ -0.93
NFX1-203ENST00000379540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.23□□□□□ -0.934e-7■■■□□ 17.2
NFX1-203ENST00000379540 GPRASP1Q5JY77 1395 aa9.23□□□□□ -0.93
NFX1-203ENST00000379540 ST20-MTHFSA0A0A6YYL1 179 aa9.23□□□□□ -0.93
NFX1-203ENST00000379540 REC8O95072 547 aa9.23□□□□□ -0.93
NFX1-203ENST00000379540 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
NFX1-203ENST00000379540 PANK3Q9H999 370 aa9.22□□□□□ -0.93
NFX1-203ENST00000379540 RNF20Q5VTR2 975 aa9.22□□□□□ -0.93
NFX1-203ENST00000379540 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
NFX1-203ENST00000379540 TPM2P07951 284 aa9.22□□□□□ -0.93
NFX1-203ENST00000379540 ZKSCAN1P17029 563 aaPredicted RBP9.22□□□□□ -0.93
NFX1-203ENST00000379540 APBB1O00213 710 aa9.22□□□□□ -0.93
NFX1-203ENST00000379540 SF3A1Q15459 793 aaKnown RBP9.22□□□□□ -0.93
NFX1-203ENST00000379540 THEMISQ8N1K5 641 aaPredicted RBP9.22□□□□□ -0.93
NFX1-203ENST00000379540 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
NFX1-203ENST00000379540 TPM3P06753 285 aa9.21□□□□□ -0.93
NFX1-203ENST00000379540 SLC52A1Q9NWF4 448 aa9.21□□□□□ -0.93
NFX1-203ENST00000379540 C9orf78Q9NZ63 289 aaPredicted RBP9.21□□□□□ -0.94
NFX1-203ENST00000379540 CTDP1Q9Y5B0 961 aaPredicted RBP9.21□□□□□ -0.94
NFX1-203ENST00000379540 SKOR2Q2VWA4 1001 aaPredicted RBP9.2□□□□□ -0.94
NFX1-203ENST00000379540 MEX3CQ5U5Q3 659 aaKnown RBP9.2□□□□□ -0.94
NFX1-203ENST00000379540 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 KIF7Q2M1P5 1343 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 TSR1Q2NL82 804 aaKnown RBP9.2□□□□□ -0.94
NFX1-203ENST00000379540 TOMM22Q9NS69 142 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 MAGI2Q86UL8 1455 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 ABCA9Q8IUA7 1624 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 RPGRIP1LQ68CZ1 1315 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 DDX11L8A8MPP1 907 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 DIAPH3Q9NSV4 1193 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 HOOK1Q9UJC3 728 aaKnown RBP9.2□□□□□ -0.94
NFX1-203ENST00000379540 FANCAO15360 1455 aa9.2□□□□□ -0.94
NFX1-203ENST00000379540 TPM1P09493 284 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 TRDNQ13061 729 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 RUNDC1Q96C34 613 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 ERC2O15083 957 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
NFX1-203ENST00000379540 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 FAM184AQ8NB25 1140 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 EIF2AK4Q9P2K8 1649 aaKnown RBP9.19□□□□□ -0.94
NFX1-203ENST00000379540 TRIM29Q14134 588 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 GAS2L2Q8NHY3 880 aa9.19□□□□□ -0.94
NFX1-203ENST00000379540 NOC3LQ8WTT2 800 aaKnown RBP9.19□□□□□ -0.94
NFX1-203ENST00000379540 ATP10AO60312 1499 aa9.18□□□□□ -0.94
NFX1-203ENST00000379540 MINK1Q8N4C8 1332 aaPredicted RBP9.18□□□□□ -0.94
NFX1-203ENST00000379540 KDM5CP41229 1560 aa9.18□□□□□ -0.94
NFX1-203ENST00000379540 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
NFX1-203ENST00000379540 ZBED9Q6R2W3 1325 aa9.18□□□□□ -0.94
NFX1-203ENST00000379540 G3BP1Q13283 466 aaKnown RBP eCLIP9.18□□□□□ -0.94
NFX1-203ENST00000379540 ANKRD20A12PQ8NF67 263 aa9.18□□□□□ -0.94
NFX1-203ENST00000379540 ASXL2Q76L83 1435 aa9.18□□□□□ -0.94
NFX1-203ENST00000379540 PNISRQ8TF01 805 aaKnown RBP9.17□□□□□ -0.94
NFX1-203ENST00000379540 ADGRL1O94910 1474 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 CFAP74Q9C0B2 1584 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 ZFYVE16Q7Z3T8 1539 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 PRKRIP1Q9H875 184 aaPredicted RBP9.17□□□□□ -0.94
NFX1-203ENST00000379540 H3BQV1 296 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 IFIT2P09913 472 aaKnown RBP9.17□□□□□ -0.94
NFX1-203ENST00000379540 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 TCEAL9Q9UHQ7 104 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
NFX1-203ENST00000379540 VPS37DQ86XT2 251 aa9.16□□□□□ -0.94
NFX1-203ENST00000379540 SMG6Q86US8 1419 aaKnown RBP9.16□□□□□ -0.94
NFX1-203ENST00000379540 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
NFX1-203ENST00000379540 PLEKHO1Q53GL0 409 aaPredicted RBP9.16□□□□□ -0.94
NFX1-203ENST00000379540 PRAG1Q86YV5 1406 aa9.15□□□□□ -0.94
NFX1-203ENST00000379540 ERICH2A1L162 156 aa9.15□□□□□ -0.94
NFX1-203ENST00000379540 RBM33Q96EV2 1170 aaKnown RBP9.15□□□□□ -0.94
NFX1-203ENST00000379540 INO80Q9ULG1 1556 aaPredicted RBP9.15□□□□□ -0.95
NFX1-203ENST00000379540 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
NFX1-203ENST00000379540 GNAI3P08754 354 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 MSH5O43196 834 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 TPD52L1Q16890 204 aaPredicted RBP9.14□□□□□ -0.95
NFX1-203ENST00000379540 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
NFX1-203ENST00000379540 CCDC70Q6NSX1 233 aa9.14□□□□□ -0.95
NFX1-203ENST00000379540 AFAP1Q8N556 730 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms