RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 JCADQ9P266 1359 aa21.44■■□□□ 1.02
SMS-201ENST00000379404 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
SMS-201ENST00000379404 CDC42BPGQ6DT37 1551 aa21.43■■□□□ 1.02
SMS-201ENST00000379404 NHSL1Q5SYE7 1610 aa21.42■■□□□ 1.02
SMS-201ENST00000379404 DLC1Q96QB1 1528 aa21.41■■□□□ 1.02
SMS-201ENST00000379404 DDX17Q92841 729 aaKnown RBP21.41■■□□□ 1.02
SMS-201ENST00000379404 RGS17Q9UGC6 210 aaPredicted RBP21.4■■□□□ 1.02
SMS-201ENST00000379404 SIN3AQ96ST3 1273 aa21.39■■□□□ 1.01
SMS-201ENST00000379404 PRAM1Q96QH2 718 aa21.38■■□□□ 1.01
SMS-201ENST00000379404 TRAK1Q9UPV9 953 aa21.36■■□□□ 1.01
SMS-201ENST00000379404 SOS2Q07890 1332 aaPredicted RBP21.35■■□□□ 1.01
SMS-201ENST00000379404 L3MBTL2Q969R5 705 aa21.35■■□□□ 1.01
SMS-201ENST00000379404 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
SMS-201ENST00000379404 SHPRHQ149N8 1683 aa21.34■■□□□ 1.01
SMS-201ENST00000379404 SPATA31A6Q5VVP1 1343 aa21.34■■□□□ 1.01
SMS-201ENST00000379404 FMN2Q9NZ56 1722 aa21.33■■□□□ 1.01
SMS-201ENST00000379404 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMS-201ENST00000379404 ESCO1Q5FWF5 840 aa21.33■■□□□ 1.01
SMS-201ENST00000379404 NUTM2FA1L443 756 aa21.32■■□□□ 1
SMS-201ENST00000379404 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
SMS-201ENST00000379404 POGKQ9P215 609 aa21.32■■□□□ 1
SMS-201ENST00000379404 LRP6O75581 1613 aa21.32■■□□□ 1
SMS-201ENST00000379404 NBPF1Q3BBV0 1214 aa21.31■■□□□ 1
SMS-201ENST00000379404 KIAA1210Q9ULL0 1709 aa21.31■■□□□ 1
SMS-201ENST00000379404 PNPLA6Q8IY17 1366 aa21.29■■□□□ 1
SMS-201ENST00000379404 FOXO3O43524 673 aa21.28■■□□□ 1
SMS-201ENST00000379404 NEUROD1Q13562 356 aa21.28■■□□□ 1
SMS-201ENST00000379404 ADGRB2O60241 1585 aa21.27■■□□□ 1
SMS-201ENST00000379404 PXDNQ92626 1479 aa21.26■□□□□ 0.99
SMS-201ENST00000379404 NPHP3Q7Z494 1330 aa21.26■□□□□ 0.99
SMS-201ENST00000379404 SOCS7O14512 581 aa21.25■□□□□ 0.99
SMS-201ENST00000379404 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
SMS-201ENST00000379404 ARHGEF28Q8N1W1 1705 aaKnown RBP21.25■□□□□ 0.99
SMS-201ENST00000379404 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
SMS-201ENST00000379404 RGPD8O14715 1765 aaPredicted RBP21.25■□□□□ 0.99
SMS-201ENST00000379404 MINK1Q8N4C8 1332 aaPredicted RBP21.25■□□□□ 0.99
SMS-201ENST00000379404 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
SMS-201ENST00000379404 WASLO00401 505 aaPredicted RBP21.23■□□□□ 0.99
SMS-201ENST00000379404 ANKARQ7Z5J8 1434 aa21.22■□□□□ 0.99
SMS-201ENST00000379404 PHF8Q9UPP1 1060 aa21.22■□□□□ 0.99
SMS-201ENST00000379404 NUTM2BA6NNL0 878 aaPredicted RBP21.21■□□□□ 0.99
SMS-201ENST00000379404 NUTM2EB1AL46 878 aaPredicted RBP21.21■□□□□ 0.99
SMS-201ENST00000379404 XPCQ01831 940 aaPredicted RBP21.21■□□□□ 0.99
SMS-201ENST00000379404 NUTM2AQ8IVF1 878 aaPredicted RBP21.21■□□□□ 0.99
SMS-201ENST00000379404 PRR36Q9H6K5 1346 aa21.21■□□□□ 0.99
SMS-201ENST00000379404 KIF1AQ12756 1690 aa21.2■□□□□ 0.98
SMS-201ENST00000379404 NBPF8Q3BBV2 869 aa21.18■□□□□ 0.98
SMS-201ENST00000379404 KRT28Q7Z3Y7 464 aa21.18■□□□□ 0.98
SMS-201ENST00000379404 COL22A1Q8NFW1 1626 aaPredicted RBP21.18■□□□□ 0.98
SMS-201ENST00000379404 MEX3CQ5U5Q3 659 aaKnown RBP21.17■□□□□ 0.98
SMS-201ENST00000379404 TRPM1Q7Z4N2 1603 aa21.16■□□□□ 0.98
SMS-201ENST00000379404 TULP4Q9NRJ4 1543 aa21.16■□□□□ 0.98
SMS-201ENST00000379404 SPATA31A3Q5VYP0 1347 aa21.16■□□□□ 0.98
SMS-201ENST00000379404 PMFBP1Q8TBY8 1022 aa21.15■□□□□ 0.98
SMS-201ENST00000379404 EIF3AQ14152 1382 aaKnown RBP21.14■□□□□ 0.98
SMS-201ENST00000379404 CDK19Q9BWU1 502 aa21.14■□□□□ 0.97
SMS-201ENST00000379404 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
SMS-201ENST00000379404 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
SMS-201ENST00000379404 NUDT16Q96DE0 195 aaKnown RBP21.12■□□□□ 0.97
SMS-201ENST00000379404 ATP7BP35670 1465 aa21.12■□□□□ 0.97
SMS-201ENST00000379404 SBNO1A3KN83 1393 aa21.11■□□□□ 0.97
SMS-201ENST00000379404 PSME1Q06323 249 aa21.11■□□□□ 0.97
SMS-201ENST00000379404 GPRASP1Q5JY77 1395 aa21.1■□□□□ 0.97
SMS-201ENST00000379404 AFF2P51816 1311 aa21.1■□□□□ 0.97
SMS-201ENST00000379404 ADAMTS2O95450 1211 aa21.1■□□□□ 0.97
SMS-201ENST00000379404 C8orf37Q96NL8 207 aa21.1■□□□□ 0.97
SMS-201ENST00000379404 TNS3Q68CZ2 1445 aa21.08■□□□□ 0.97
SMS-201ENST00000379404 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.96
SMS-201ENST00000379404 TONSLQ96HA7 1378 aa21.08■□□□□ 0.96
SMS-201ENST00000379404 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
SMS-201ENST00000379404 CCDC61Q9Y6R9 512 aa21.06■□□□□ 0.96
SMS-201ENST00000379404 TRPM3Q9HCF6 1732 aaPredicted RBP21.06■□□□□ 0.96
SMS-201ENST00000379404 PLEKHG3A1L390 1219 aa21.05■□□□□ 0.96
SMS-201ENST00000379404 NGLY1Q96IV0 654 aa21.05■□□□□ 0.96
SMS-201ENST00000379404 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
SMS-201ENST00000379404 TOPAZ1Q8N9V7 1692 aa21.03■□□□□ 0.96
SMS-201ENST00000379404 QRICH2Q9H0J4 1663 aa21.03■□□□□ 0.96
SMS-201ENST00000379404 POLR3AO14802 1390 aaPredicted RBP21.03■□□□□ 0.96
SMS-201ENST00000379404 NGDNQ8NEJ9 315 aaKnown RBP21.03■□□□□ 0.96
SMS-201ENST00000379404 ARHGEF10O15013 1369 aa21.02■□□□□ 0.96
SMS-201ENST00000379404 ITSN1Q15811 1721 aa21.02■□□□□ 0.96
SMS-201ENST00000379404 QTRT2Q9H974 415 aaKnown RBP21.02■□□□□ 0.96
SMS-201ENST00000379404 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
SMS-201ENST00000379404 CABLES1Q8TDN4 633 aa21.01■□□□□ 0.95
SMS-201ENST00000379404 CABP2Q9NPB3 220 aa21.01■□□□□ 0.95
SMS-201ENST00000379404 ALS2Q96Q42 1657 aa21.01■□□□□ 0.95
SMS-201ENST00000379404 MARF1Q9Y4F3 1742 aaKnown RBP21.01■□□□□ 0.95
SMS-201ENST00000379404 RXRBP28702 533 aa21■□□□□ 0.95
SMS-201ENST00000379404 ACEP12821 1306 aa21■□□□□ 0.95
SMS-201ENST00000379404 BCL9LQ86UU0 1499 aa21■□□□□ 0.95
SMS-201ENST00000379404 SRPK2P78362 688 aaKnown RBP20.99■□□□□ 0.95
SMS-201ENST00000379404 USP21Q9UK80 565 aa20.99■□□□□ 0.95
SMS-201ENST00000379404 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
SMS-201ENST00000379404 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
SMS-201ENST00000379404 RBM6P78332 1123 aaKnown RBP20.96■□□□□ 0.95
SMS-201ENST00000379404 EVC2Q86UK5 1308 aa20.96■□□□□ 0.95
SMS-201ENST00000379404 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
SMS-201ENST00000379404 SBNO2Q9Y2G9 1366 aa20.96■□□□□ 0.95
SMS-201ENST00000379404 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.95
SMS-201ENST00000379404 CDK12Q9NYV4 1490 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms