RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
UPK1A-202ENST00000379013 ASXL1Q8IXJ9 1541 aa19.81■□□□□ 0.76
UPK1A-202ENST00000379013 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
UPK1A-202ENST00000379013 PIK3C2GO75747 1445 aa19.81■□□□□ 0.76
UPK1A-202ENST00000379013 KIAA1210Q9ULL0 1709 aa19.81■□□□□ 0.76
UPK1A-202ENST00000379013 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
UPK1A-202ENST00000379013 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
UPK1A-202ENST00000379013 LRPPRCP42704 1394 aaKnown RBP19.79■□□□□ 0.76
UPK1A-202ENST00000379013 AHDC1Q5TGY3 1603 aaPredicted RBP19.79■□□□□ 0.76
UPK1A-202ENST00000379013 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
UPK1A-202ENST00000379013 LRP6O75581 1613 aa19.77■□□□□ 0.76
UPK1A-202ENST00000379013 NRXN1Q9ULB1 1477 aa19.77■□□□□ 0.76
UPK1A-202ENST00000379013 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
UPK1A-202ENST00000379013 TECPR2O15040 1411 aa19.75■□□□□ 0.75
UPK1A-202ENST00000379013 NUTM2FA1L443 756 aa19.74■□□□□ 0.75
UPK1A-202ENST00000379013 YTHDC2Q9H6S0 1430 aaKnown RBP19.74■□□□□ 0.75
UPK1A-202ENST00000379013 TRPM1Q7Z4N2 1603 aa19.73■□□□□ 0.75
UPK1A-202ENST00000379013 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
UPK1A-202ENST00000379013 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
UPK1A-202ENST00000379013 NUTM2AQ8IVF1 878 aaPredicted RBP19.72■□□□□ 0.75
UPK1A-202ENST00000379013 SPATA31A6Q5VVP1 1343 aa19.72■□□□□ 0.75
UPK1A-202ENST00000379013 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
UPK1A-202ENST00000379013 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
UPK1A-202ENST00000379013 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
UPK1A-202ENST00000379013 RALGAPBQ86X10 1494 aa19.69■□□□□ 0.74
UPK1A-202ENST00000379013 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
UPK1A-202ENST00000379013 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
UPK1A-202ENST00000379013 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
UPK1A-202ENST00000379013 PNPLA6Q8IY17 1366 aa19.68■□□□□ 0.74
UPK1A-202ENST00000379013 FOXO3O43524 673 aa19.67■□□□□ 0.74
UPK1A-202ENST00000379013 XPCQ01831 940 aaPredicted RBP19.67■□□□□ 0.74
UPK1A-202ENST00000379013 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
UPK1A-202ENST00000379013 SHPRHQ149N8 1683 aa19.65■□□□□ 0.74
UPK1A-202ENST00000379013 TRAK1Q9UPV9 953 aa19.64■□□□□ 0.73
UPK1A-202ENST00000379013 ROCK2O75116 1388 aaKnown RBP19.64■□□□□ 0.73
UPK1A-202ENST00000379013 ADGRB1O14514 1584 aa19.63■□□□□ 0.73
UPK1A-202ENST00000379013 MEX3CQ5U5Q3 659 aaKnown RBP19.63■□□□□ 0.73
UPK1A-202ENST00000379013 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
UPK1A-202ENST00000379013 KNDC1Q76NI1 1749 aa19.6■□□□□ 0.73
UPK1A-202ENST00000379013 ADAMTS2O95450 1211 aa19.6■□□□□ 0.73
UPK1A-202ENST00000379013 EIF3AQ14152 1382 aaKnown RBP19.59■□□□□ 0.73
UPK1A-202ENST00000379013 GPRASP1Q5JY77 1395 aa19.59■□□□□ 0.73
UPK1A-202ENST00000379013 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
UPK1A-202ENST00000379013 AFF2P51816 1311 aa19.58■□□□□ 0.73
UPK1A-202ENST00000379013 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
UPK1A-202ENST00000379013 NBPF8Q3BBV2 869 aa19.58■□□□□ 0.72
UPK1A-202ENST00000379013 C8orf37Q96NL8 207 aa19.58■□□□□ 0.72
UPK1A-202ENST00000379013 POGKQ9P215 609 aa19.58■□□□□ 0.72
UPK1A-202ENST00000379013 PXDNQ92626 1479 aa19.58■□□□□ 0.72
UPK1A-202ENST00000379013 NPHP3Q7Z494 1330 aa19.56■□□□□ 0.72
UPK1A-202ENST00000379013 ZNF772Q68DY9 489 aaPredicted RBP19.56■□□□□ 0.72
UPK1A-202ENST00000379013 CARD11Q9BXL7 1154 aa19.56■□□□□ 0.72
UPK1A-202ENST00000379013 MINK1Q8N4C8 1332 aaPredicted RBP19.55■□□□□ 0.72
UPK1A-202ENST00000379013 KRT28Q7Z3Y7 464 aa19.55■□□□□ 0.72
UPK1A-202ENST00000379013 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
UPK1A-202ENST00000379013 PHF8Q9UPP1 1060 aa19.54■□□□□ 0.72
UPK1A-202ENST00000379013 DLC1Q96QB1 1528 aa19.54■□□□□ 0.72
UPK1A-202ENST00000379013 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
UPK1A-202ENST00000379013 PMFBP1Q8TBY8 1022 aa19.53■□□□□ 0.72
UPK1A-202ENST00000379013 ARHGEF28Q8N1W1 1705 aaKnown RBP19.53■□□□□ 0.72
UPK1A-202ENST00000379013 NGLY1Q96IV0 654 aa19.52■□□□□ 0.72
UPK1A-202ENST00000379013 QTRT2Q9H974 415 aaKnown RBP19.52■□□□□ 0.72
UPK1A-202ENST00000379013 RGPD8O14715 1765 aaPredicted RBP19.52■□□□□ 0.71
UPK1A-202ENST00000379013 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
UPK1A-202ENST00000379013 SLC24A1O60721 1099 aa19.5■□□□□ 0.71
UPK1A-202ENST00000379013 RXRBP28702 533 aa19.5■□□□□ 0.71
UPK1A-202ENST00000379013 WASLO00401 505 aaPredicted RBP19.49■□□□□ 0.71
UPK1A-202ENST00000379013 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
UPK1A-202ENST00000379013 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
UPK1A-202ENST00000379013 USP47Q96K76 1375 aa19.48■□□□□ 0.71
UPK1A-202ENST00000379013 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
UPK1A-202ENST00000379013 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
UPK1A-202ENST00000379013 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
UPK1A-202ENST00000379013 PLEKHG5O94827 1062 aa19.45■□□□□ 0.7
UPK1A-202ENST00000379013 USP21Q9UK80 565 aa19.45■□□□□ 0.7
UPK1A-202ENST00000379013 COL22A1Q8NFW1 1626 aaPredicted RBP19.44■□□□□ 0.7
UPK1A-202ENST00000379013 PSME1Q06323 249 aa19.44■□□□□ 0.7
UPK1A-202ENST00000379013 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
UPK1A-202ENST00000379013 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
UPK1A-202ENST00000379013 BCL9LQ86UU0 1499 aa19.42■□□□□ 0.7
UPK1A-202ENST00000379013 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
UPK1A-202ENST00000379013 RBM6P78332 1123 aaKnown RBP19.42■□□□□ 0.7
UPK1A-202ENST00000379013 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
UPK1A-202ENST00000379013 SBNO2Q9Y2G9 1366 aa19.42■□□□□ 0.7
UPK1A-202ENST00000379013 UPF1Q92900 1129 aaKnown RBP eCLIP19.41■□□□□ 0.7
UPK1A-202ENST00000379013 CENPJQ9HC77 1338 aaPredicted RBP19.41■□□□□ 0.7
UPK1A-202ENST00000379013 SBNO1A3KN83 1393 aa19.4■□□□□ 0.7
UPK1A-202ENST00000379013 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.69
UPK1A-202ENST00000379013 RGS12O14924 1447 aa19.38■□□□□ 0.69
UPK1A-202ENST00000379013 KIF1AQ12756 1690 aa19.38■□□□□ 0.69
UPK1A-202ENST00000379013 TNS3Q68CZ2 1445 aa19.38■□□□□ 0.69
UPK1A-202ENST00000379013 ATRNO75882 1429 aa19.37■□□□□ 0.69
UPK1A-202ENST00000379013 TRPC5Q9UL62 973 aaPredicted RBP19.37■□□□□ 0.69
UPK1A-202ENST00000379013 TULP4Q9NRJ4 1543 aa19.36■□□□□ 0.69
UPK1A-202ENST00000379013 FAM83GA6ND36 823 aa19.36■□□□□ 0.69
UPK1A-202ENST00000379013 EP400Q96L91 3159 aa19.36■□□□□ 0.69
UPK1A-202ENST00000379013 CDK12Q9NYV4 1490 aaPredicted RBP19.35■□□□□ 0.69
UPK1A-202ENST00000379013 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
UPK1A-202ENST00000379013 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
UPK1A-202ENST00000379013 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms