RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 DLC1Q96QB1 1528 aa28.48■■■□□ 2.15
C5orf56-203ENST00000378953 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
C5orf56-203ENST00000378953 POGKQ9P215 609 aa28.46■■■□□ 2.15
C5orf56-203ENST00000378953 AHDC1Q5TGY3 1603 aaPredicted RBP28.46■■■□□ 2.15
C5orf56-203ENST00000378953 PHLPP1O60346 1717 aa28.46■■■□□ 2.15
C5orf56-203ENST00000378953 SAFB2Q14151 953 aaKnown RBP eCLIP28.44■■■□□ 2.14
C5orf56-203ENST00000378953 ORAI2Q96SN7 254 aa28.44■■■□□ 2.14
C5orf56-203ENST00000378953 ILDR2Q71H61 639 aa28.43■■■□□ 2.14
C5orf56-203ENST00000378953 JCADQ9P266 1359 aa28.42■■■□□ 2.14
C5orf56-203ENST00000378953 COL16A1Q07092 1604 aaPredicted RBP28.42■■■□□ 2.14
C5orf56-203ENST00000378953 MED1Q15648 1581 aaPredicted RBP28.41■■■□□ 2.14
C5orf56-203ENST00000378953 NBPF1Q3BBV0 1214 aa28.4■■■□□ 2.14
C5orf56-203ENST00000378953 PCGF6Q9BYE7 350 aa28.4■■■□□ 2.14
C5orf56-203ENST00000378953 KIAA1210Q9ULL0 1709 aa28.38■■■□□ 2.13
C5orf56-203ENST00000378953 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
C5orf56-203ENST00000378953 ESCO1Q5FWF5 840 aa28.38■■■□□ 2.13
C5orf56-203ENST00000378953 DDX17Q92841 729 aaKnown RBP28.38■■■□□ 2.13
C5orf56-203ENST00000378953 NHSL1Q5SYE7 1610 aa28.35■■■□□ 2.13
C5orf56-203ENST00000378953 LRRC59Q96AG4 307 aaKnown RBP28.33■■■□□ 2.13
C5orf56-203ENST00000378953 MINK1Q8N4C8 1332 aaPredicted RBP28.32■■■□□ 2.12
C5orf56-203ENST00000378953 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
C5orf56-203ENST00000378953 HIRIP3Q9BW71 556 aaPredicted RBP28.31■■■□□ 2.12
C5orf56-203ENST00000378953 TONSLQ96HA7 1378 aa28.31■■■□□ 2.12
C5orf56-203ENST00000378953 SOS2Q07890 1332 aaPredicted RBP28.3■■■□□ 2.12
C5orf56-203ENST00000378953 SPATA31A6Q5VVP1 1343 aa28.29■■■□□ 2.12
C5orf56-203ENST00000378953 PHF23Q9BUL5 403 aaPredicted RBP28.29■■■□□ 2.12
C5orf56-203ENST00000378953 ADGRB2O60241 1585 aa28.28■■■□□ 2.12
C5orf56-203ENST00000378953 NPHP3Q7Z494 1330 aa28.28■■■□□ 2.12
C5orf56-203ENST00000378953 FOXO3O43524 673 aa28.27■■■□□ 2.12
C5orf56-203ENST00000378953 ARHGEF28Q8N1W1 1705 aaKnown RBP28.26■■■□□ 2.12
C5orf56-203ENST00000378953 WASLO00401 505 aaPredicted RBP28.26■■■□□ 2.11
C5orf56-203ENST00000378953 NBPF8Q3BBV2 869 aa28.25■■■□□ 2.11
C5orf56-203ENST00000378953 ANKARQ7Z5J8 1434 aa28.24■■■□□ 2.11
C5orf56-203ENST00000378953 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
C5orf56-203ENST00000378953 PHF8Q9UPP1 1060 aa28.23■■■□□ 2.11
C5orf56-203ENST00000378953 EIF3AQ14152 1382 aaKnown RBP28.23■■■□□ 2.11
C5orf56-203ENST00000378953 ROCK2O75116 1388 aaKnown RBP28.22■■■□□ 2.11
C5orf56-203ENST00000378953 PNPLA6Q8IY17 1366 aa28.22■■■□□ 2.11
C5orf56-203ENST00000378953 TRPM1Q7Z4N2 1603 aa28.21■■■□□ 2.11
C5orf56-203ENST00000378953 CENPJQ9HC77 1338 aaPredicted RBP28.19■■■□□ 2.1
C5orf56-203ENST00000378953 SOCS7O14512 581 aa28.19■■■□□ 2.1
C5orf56-203ENST00000378953 XPCQ01831 940 aaPredicted RBP28.19■■■□□ 2.1
C5orf56-203ENST00000378953 PXDNQ92626 1479 aa28.19■■■□□ 2.1
C5orf56-203ENST00000378953 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
C5orf56-203ENST00000378953 LRP6O75581 1613 aa28.18■■■□□ 2.1
C5orf56-203ENST00000378953 KIF1AQ12756 1690 aa28.17■■■□□ 2.1
C5orf56-203ENST00000378953 NUTM2BA6NNL0 878 aaPredicted RBP28.17■■■□□ 2.1
C5orf56-203ENST00000378953 NUTM2EB1AL46 878 aaPredicted RBP28.17■■■□□ 2.1
C5orf56-203ENST00000378953 NUTM2AQ8IVF1 878 aaPredicted RBP28.17■■■□□ 2.1
C5orf56-203ENST00000378953 TULP4Q9NRJ4 1543 aa28.17■■■□□ 2.1
C5orf56-203ENST00000378953 CDK19Q9BWU1 502 aa28.16■■■□□ 2.1
C5orf56-203ENST00000378953 RGS17Q9UGC6 210 aaPredicted RBP28.16■■■□□ 2.1
C5orf56-203ENST00000378953 USP32Q8NFA0 1604 aa28.16■■■□□ 2.1
C5orf56-203ENST00000378953 CLSPNQ9HAW4 1339 aa28.16■■■□□ 2.1
C5orf56-203ENST00000378953 GPRASP1Q5JY77 1395 aa28.15■■■□□ 2.1
C5orf56-203ENST00000378953 KRT28Q7Z3Y7 464 aa28.15■■■□□ 2.1
C5orf56-203ENST00000378953 MEX3CQ5U5Q3 659 aaKnown RBP28.14■■■□□ 2.1
C5orf56-203ENST00000378953 PMFBP1Q8TBY8 1022 aa28.14■■■□□ 2.1
C5orf56-203ENST00000378953 RGPD8O14715 1765 aaPredicted RBP28.14■■■□□ 2.09
C5orf56-203ENST00000378953 NUDT16Q96DE0 195 aaKnown RBP28.13■■■□□ 2.09
C5orf56-203ENST00000378953 PSME1Q06323 249 aa28.11■■■□□ 2.09
C5orf56-203ENST00000378953 CARD11Q9BXL7 1154 aa28.09■■■□□ 2.09
C5orf56-203ENST00000378953 SPATA31A3Q5VYP0 1347 aa28.09■■■□□ 2.09
C5orf56-203ENST00000378953 ATP7BP35670 1465 aa28.08■■■□□ 2.09
C5orf56-203ENST00000378953 RALGAPBQ86X10 1494 aa28.08■■■□□ 2.09
C5orf56-203ENST00000378953 TIMELESSQ9UNS1 1208 aa28.06■■■□□ 2.08
C5orf56-203ENST00000378953 CCDC61Q9Y6R9 512 aa28.06■■■□□ 2.08
C5orf56-203ENST00000378953 SBNO1A3KN83 1393 aa28.05■■■□□ 2.08
C5orf56-203ENST00000378953 NGDNQ8NEJ9 315 aaKnown RBP28.05■■■□□ 2.08
C5orf56-203ENST00000378953 SRPK2P78362 688 aaKnown RBP28.04■■■□□ 2.08
C5orf56-203ENST00000378953 COL22A1Q8NFW1 1626 aaPredicted RBP28.03■■■□□ 2.08
C5orf56-203ENST00000378953 POTEAQ6S8J7 498 aa28.03■■■□□ 2.08
C5orf56-203ENST00000378953 CCER1Q8TC90 406 aaPredicted RBP28.03■■■□□ 2.08
C5orf56-203ENST00000378953 QRICH2Q9H0J4 1663 aa28.03■■■□□ 2.08
C5orf56-203ENST00000378953 TNS3Q68CZ2 1445 aa28.02■■■□□ 2.08
C5orf56-203ENST00000378953 ADAMTS2O95450 1211 aa28.02■■■□□ 2.08
C5orf56-203ENST00000378953 CABP2Q9NPB3 220 aa28.02■■■□□ 2.08
C5orf56-203ENST00000378953 EVC2Q86UK5 1308 aa28■■■□□ 2.07
C5orf56-203ENST00000378953 PLEKHG3A1L390 1219 aa28■■■□□ 2.07
C5orf56-203ENST00000378953 ZNF772Q68DY9 489 aaPredicted RBP28■■■□□ 2.07
C5orf56-203ENST00000378953 C8orf37Q96NL8 207 aa27.99■■■□□ 2.07
C5orf56-203ENST00000378953 ARHGEF10O15013 1369 aa27.98■■■□□ 2.07
C5orf56-203ENST00000378953 LMOD2Q6P5Q4 547 aa27.97■■■□□ 2.07
C5orf56-203ENST00000378953 ITSN1Q15811 1721 aa27.97■■■□□ 2.07
C5orf56-203ENST00000378953 ACEP12821 1306 aa27.96■■■□□ 2.07
C5orf56-203ENST00000378953 AFF2P51816 1311 aa27.96■■■□□ 2.07
C5orf56-203ENST00000378953 NGLY1Q96IV0 654 aa27.96■■■□□ 2.07
C5orf56-203ENST00000378953 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
C5orf56-203ENST00000378953 SBNO2Q9Y2G9 1366 aa27.95■■■□□ 2.06
C5orf56-203ENST00000378953 TOPAZ1Q8N9V7 1692 aa27.94■■■□□ 2.06
C5orf56-203ENST00000378953 PPIP5K1Q6PFW1 1433 aa27.93■■■□□ 2.06
C5orf56-203ENST00000378953 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
C5orf56-203ENST00000378953 TRPM3Q9HCF6 1732 aaPredicted RBP27.91■■■□□ 2.06
C5orf56-203ENST00000378953 CABLES1Q8TDN4 633 aa27.9■■■□□ 2.06
C5orf56-203ENST00000378953 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
C5orf56-203ENST00000378953 FNBP4Q8N3X1 1017 aaPredicted RBP27.89■■■□□ 2.06
C5orf56-203ENST00000378953 HAP1P54257 671 aaPredicted RBP27.88■■■□□ 2.05
C5orf56-203ENST00000378953 PLEKHG5O94827 1062 aa27.87■■■□□ 2.05
C5orf56-203ENST00000378953 ST20-MTHFSA0A0A6YYL1 179 aa27.85■■■□□ 2.05
C5orf56-203ENST00000378953 USP21Q9UK80 565 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms