RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 FNBP4Q8N3X1 1017 aaPredicted RBP29.46■■■□□ 2.31
CCDC107-202ENST00000378406 MYOM2P54296 1465 aa29.44■■■□□ 2.3
CCDC107-202ENST00000378406 FOXD1Q16676 465 aa29.44■■■□□ 2.3
CCDC107-202ENST00000378406 TRPC5Q9UL62 973 aaPredicted RBP29.44■■■□□ 2.3
CCDC107-202ENST00000378406 NPHP3Q7Z494 1330 aa29.44■■■□□ 2.3
CCDC107-202ENST00000378406 ESCO1Q5FWF5 840 aa29.43■■■□□ 2.3
CCDC107-202ENST00000378406 ADGRF5Q8IZF2 1346 aa29.43■■■□□ 2.3
CCDC107-202ENST00000378406 PXDNQ92626 1479 aa29.42■■■□□ 2.3
CCDC107-202ENST00000378406 ATRNO75882 1429 aa29.42■■■□□ 2.3
CCDC107-202ENST00000378406 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
CCDC107-202ENST00000378406 TECPR2O15040 1411 aa29.4■■■□□ 2.3
CCDC107-202ENST00000378406 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
CCDC107-202ENST00000378406 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
CCDC107-202ENST00000378406 FOXO3O43524 673 aa29.37■■■□□ 2.29
CCDC107-202ENST00000378406 IFT172Q9UG01 1749 aa29.37■■■□□ 2.29
CCDC107-202ENST00000378406 XPCQ01831 940 aaPredicted RBP29.36■■■□□ 2.29
CCDC107-202ENST00000378406 WAPLQ7Z5K2 1190 aa29.36■■■□□ 2.29
CCDC107-202ENST00000378406 STK26Q9P289 416 aa29.36■■■□□ 2.29
CCDC107-202ENST00000378406 MARF1Q9Y4F3 1742 aaKnown RBP29.36■■■□□ 2.29
CCDC107-202ENST00000378406 LRPPRCP42704 1394 aaKnown RBP29.36■■■□□ 2.29
CCDC107-202ENST00000378406 RGL3Q3MIN7 710 aa29.35■■■□□ 2.29
CCDC107-202ENST00000378406 BCL9LQ86UU0 1499 aa29.35■■■□□ 2.29
CCDC107-202ENST00000378406 ANKRD30BQ9BXX2 1392 aa29.34■■■□□ 2.29
CCDC107-202ENST00000378406 NUTM2FA1L443 756 aa29.33■■■□□ 2.29
CCDC107-202ENST00000378406 ABCC11Q96J66 1382 aa29.33■■■□□ 2.29
CCDC107-202ENST00000378406 KNDC1Q76NI1 1749 aa29.33■■■□□ 2.29
CCDC107-202ENST00000378406 PLEKHH1Q9ULM0 1364 aa29.32■■■□□ 2.28
CCDC107-202ENST00000378406 TMEM132EQ6IEE7 984 aa29.3■■■□□ 2.28
CCDC107-202ENST00000378406 PIK3C2GO75747 1445 aa29.29■■■□□ 2.28
CCDC107-202ENST00000378406 FMN2Q9NZ56 1722 aa29.28■■■□□ 2.28
CCDC107-202ENST00000378406 MPHOSPH9Q99550 1183 aa29.27■■■□□ 2.28
CCDC107-202ENST00000378406 EP400Q96L91 3159 aa29.27■■■□□ 2.28
CCDC107-202ENST00000378406 GJD4Q96KN9 370 aaPredicted RBP29.25■■■□□ 2.27
CCDC107-202ENST00000378406 YTHDC2Q9H6S0 1430 aaKnown RBP29.25■■■□□ 2.27
CCDC107-202ENST00000378406 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.24■■■□□ 2.27
CCDC107-202ENST00000378406 KIF1AQ12756 1690 aa29.24■■■□□ 2.27
CCDC107-202ENST00000378406 SPATA31A3Q5VYP0 1347 aa29.23■■■□□ 2.27
CCDC107-202ENST00000378406 SRCAPQ6ZRS2 3230 aa29.23■■■□□ 2.27
CCDC107-202ENST00000378406 SLIT2O94813 1529 aa29.2■■■□□ 2.27
CCDC107-202ENST00000378406 KRT28Q7Z3Y7 464 aa29.18■■■□□ 2.26
CCDC107-202ENST00000378406 CCDC125Q86Z20 511 aa29.18■■■□□ 2.26
CCDC107-202ENST00000378406 UNC5CLQ8IV45 518 aa29.18■■■□□ 2.26
CCDC107-202ENST00000378406 SIRT1Q96EB6 747 aa29.18■■■□□ 2.26
CCDC107-202ENST00000378406 GLI3P10071 1580 aa29.18■■■□□ 2.26
CCDC107-202ENST00000378406 USP32Q8NFA0 1604 aa29.17■■■□□ 2.26
CCDC107-202ENST00000378406 RALGAPBQ86X10 1494 aa29.17■■■□□ 2.26
CCDC107-202ENST00000378406 C14orf93Q9H972 538 aaKnown RBP29.16■■■□□ 2.26
CCDC107-202ENST00000378406 RGPD8O14715 1765 aaPredicted RBP29.16■■■□□ 2.26
CCDC107-202ENST00000378406 ZRANB1Q9UGI0 708 aa29.15■■■□□ 2.26
CCDC107-202ENST00000378406 NRXN1Q9ULB1 1477 aa29.15■■■□□ 2.26
CCDC107-202ENST00000378406 TNS3Q68CZ2 1445 aa29.12■■■□□ 2.25
CCDC107-202ENST00000378406 PHF8Q9UPP1 1060 aa29.12■■■□□ 2.25
CCDC107-202ENST00000378406 CFAP70Q5T0N1 1121 aa29.11■■■□□ 2.25
CCDC107-202ENST00000378406 DHX57Q6P158 1386 aaKnown RBP29.1■■■□□ 2.25
CCDC107-202ENST00000378406 PSME1Q06323 249 aa29.08■■■□□ 2.25
CCDC107-202ENST00000378406 CABLES1Q8TDN4 633 aa29.08■■■□□ 2.25
CCDC107-202ENST00000378406 BRWD3Q6RI45 1802 aa29.08■■■□□ 2.25
CCDC107-202ENST00000378406 SBNO1A3KN83 1393 aa29.06■■■□□ 2.24
CCDC107-202ENST00000378406 HAP1P54257 671 aaPredicted RBP29.06■■■□□ 2.24
CCDC107-202ENST00000378406 PRAM1Q96QH2 718 aa29.06■■■□□ 2.24
CCDC107-202ENST00000378406 BLMP54132 1417 aaPredicted RBP29.05■■■□□ 2.24
CCDC107-202ENST00000378406 SAFB2Q14151 953 aaKnown RBP eCLIP29.05■■■□□ 2.24
CCDC107-202ENST00000378406 ABCA3Q99758 1704 aa29.05■■■□□ 2.24
CCDC107-202ENST00000378406 PLCH1Q4KWH8 1693 aa29.05■■■□□ 2.24
CCDC107-202ENST00000378406 VPS72Q15906 364 aa29.04■■■□□ 2.24
CCDC107-202ENST00000378406 NWD2Q9ULI1 1742 aa29.03■■■□□ 2.24
CCDC107-202ENST00000378406 DLC1Q96QB1 1528 aa29.03■■■□□ 2.24
CCDC107-202ENST00000378406 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
CCDC107-202ENST00000378406 PLEKHG5O94827 1062 aa29.02■■■□□ 2.24
CCDC107-202ENST00000378406 SEPT12Q8IYM1 358 aa29.02■■■□□ 2.24
CCDC107-202ENST00000378406 ARHGEF10O15013 1369 aa29.01■■■□□ 2.24
CCDC107-202ENST00000378406 ANKARQ7Z5J8 1434 aa29■■■□□ 2.23
CCDC107-202ENST00000378406 LMOD2Q6P5Q4 547 aa28.99■■■□□ 2.23
CCDC107-202ENST00000378406 ADGRB2O60241 1585 aa28.98■■■□□ 2.23
CCDC107-202ENST00000378406 ONECUT3O60422 494 aaPredicted RBP28.98■■■□□ 2.23
CCDC107-202ENST00000378406 PMFBP1Q8TBY8 1022 aa28.98■■■□□ 2.23
CCDC107-202ENST00000378406 DEFB132Q7Z7B7 95 aa28.97■■■□□ 2.23
CCDC107-202ENST00000378406 POGKQ9P215 609 aa28.97■■■□□ 2.23
CCDC107-202ENST00000378406 ADGRB1O14514 1584 aa28.96■■■□□ 2.23
CCDC107-202ENST00000378406 FAM83GA6ND36 823 aa28.95■■■□□ 2.22
CCDC107-202ENST00000378406 CCDC9Q9Y3X0 531 aaKnown RBP28.95■■■□□ 2.22
CCDC107-202ENST00000378406 TRPM3Q9HCF6 1732 aaPredicted RBP28.94■■■□□ 2.22
CCDC107-202ENST00000378406 KRT27Q7Z3Y8 459 aa28.92■■■□□ 2.22
CCDC107-202ENST00000378406 NRAPQ86VF7 1730 aa28.91■■■□□ 2.22
CCDC107-202ENST00000378406 SF3B2Q13435 895 aaKnown RBP28.91■■■□□ 2.22
CCDC107-202ENST00000378406 HIRIP3Q9BW71 556 aaPredicted RBP28.9■■■□□ 2.22
CCDC107-202ENST00000378406 TRAK1Q9UPV9 953 aa28.9■■■□□ 2.22
CCDC107-202ENST00000378406 ALS2Q96Q42 1657 aa28.89■■■□□ 2.22
CCDC107-202ENST00000378406 PRR36Q9H6K5 1346 aa28.89■■■□□ 2.21
CCDC107-202ENST00000378406 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
CCDC107-202ENST00000378406 TULP4Q9NRJ4 1543 aa28.86■■■□□ 2.21
CCDC107-202ENST00000378406 MINK1Q8N4C8 1332 aaPredicted RBP28.86■■■□□ 2.21
CCDC107-202ENST00000378406 GPRASP1Q5JY77 1395 aa28.86■■■□□ 2.21
CCDC107-202ENST00000378406 BTG4Q9NY30 223 aa28.85■■■□□ 2.21
CCDC107-202ENST00000378406 EIF3AQ14152 1382 aaKnown RBP28.85■■■□□ 2.21
CCDC107-202ENST00000378406 COL14A1Q05707 1796 aaKnown RBP28.85■■■□□ 2.21
CCDC107-202ENST00000378406 A0A0G2JS52 829 aa28.83■■■□□ 2.21
CCDC107-202ENST00000378406 MYT1Q01538 1121 aa28.83■■■□□ 2.21
CCDC107-202ENST00000378406 FAM98CQ17RN3 349 aaKnown RBP28.83■■■□□ 2.21
CCDC107-202ENST00000378406 WASLO00401 505 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms