RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 JCADQ9P266 1359 aa22.43■■□□□ 1.18
RAB4B-202ENST00000378307 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
RAB4B-202ENST00000378307 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
RAB4B-202ENST00000378307 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
RAB4B-202ENST00000378307 RGS17Q9UGC6 210 aaPredicted RBP22.41■■□□□ 1.18
RAB4B-202ENST00000378307 NUTM2FA1L443 756 aa22.39■■□□□ 1.17
RAB4B-202ENST00000378307 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
RAB4B-202ENST00000378307 STAC3Q96MF2 364 aa22.39■■□□□ 1.17
RAB4B-202ENST00000378307 PRAM1Q96QH2 718 aa22.39■■□□□ 1.17
RAB4B-202ENST00000378307 SAFB2Q14151 953 aaKnown RBP eCLIP22.38■■□□□ 1.17
RAB4B-202ENST00000378307 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
RAB4B-202ENST00000378307 TRAK1Q9UPV9 953 aa22.38■■□□□ 1.17
RAB4B-202ENST00000378307 DLC1Q96QB1 1528 aa22.36■■□□□ 1.17
RAB4B-202ENST00000378307 SHPRHQ149N8 1683 aa22.36■■□□□ 1.17
RAB4B-202ENST00000378307 LRP6O75581 1613 aa22.35■■□□□ 1.17
RAB4B-202ENST00000378307 FMN2Q9NZ56 1722 aa22.35■■□□□ 1.17
RAB4B-202ENST00000378307 ESCO1Q5FWF5 840 aa22.34■■□□□ 1.17
RAB4B-202ENST00000378307 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.17
RAB4B-202ENST00000378307 RGPD8O14715 1765 aaPredicted RBP22.33■■□□□ 1.16
RAB4B-202ENST00000378307 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
RAB4B-202ENST00000378307 POGKQ9P215 609 aa22.32■■□□□ 1.16
RAB4B-202ENST00000378307 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
RAB4B-202ENST00000378307 NBPF1Q3BBV0 1214 aa22.31■■□□□ 1.16
RAB4B-202ENST00000378307 LRRC59Q96AG4 307 aaKnown RBP22.31■■□□□ 1.16
RAB4B-202ENST00000378307 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
RAB4B-202ENST00000378307 HIRIP3Q9BW71 556 aaPredicted RBP22.29■■□□□ 1.16
RAB4B-202ENST00000378307 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
RAB4B-202ENST00000378307 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
RAB4B-202ENST00000378307 PNPLA6Q8IY17 1366 aa22.28■■□□□ 1.16
RAB4B-202ENST00000378307 FOXO3O43524 673 aa22.28■■□□□ 1.16
RAB4B-202ENST00000378307 NUTM2BA6NNL0 878 aaPredicted RBP22.27■■□□□ 1.16
RAB4B-202ENST00000378307 NUTM2EB1AL46 878 aaPredicted RBP22.27■■□□□ 1.16
RAB4B-202ENST00000378307 XPCQ01831 940 aaPredicted RBP22.27■■□□□ 1.16
RAB4B-202ENST00000378307 POTEAQ6S8J7 498 aa22.27■■□□□ 1.16
RAB4B-202ENST00000378307 NUTM2AQ8IVF1 878 aaPredicted RBP22.27■■□□□ 1.16
RAB4B-202ENST00000378307 PXDNQ92626 1479 aa22.26■■□□□ 1.15
RAB4B-202ENST00000378307 MINK1Q8N4C8 1332 aaPredicted RBP22.26■■□□□ 1.15
RAB4B-202ENST00000378307 USP32Q8NFA0 1604 aa22.25■■□□□ 1.15
RAB4B-202ENST00000378307 SOCS7O14512 581 aa22.25■■□□□ 1.15
RAB4B-202ENST00000378307 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
RAB4B-202ENST00000378307 NPHP3Q7Z494 1330 aa22.24■■□□□ 1.15
RAB4B-202ENST00000378307 MEX3CQ5U5Q3 659 aaKnown RBP22.21■■□□□ 1.15
RAB4B-202ENST00000378307 PHF8Q9UPP1 1060 aa22.2■■□□□ 1.14
RAB4B-202ENST00000378307 PRR36Q9H6K5 1346 aa22.2■■□□□ 1.14
RAB4B-202ENST00000378307 KIF1AQ12756 1690 aa22.2■■□□□ 1.14
RAB4B-202ENST00000378307 WASLO00401 505 aaPredicted RBP22.19■■□□□ 1.14
RAB4B-202ENST00000378307 PMFBP1Q8TBY8 1022 aa22.18■■□□□ 1.14
RAB4B-202ENST00000378307 NBPF8Q3BBV2 869 aa22.17■■□□□ 1.14
RAB4B-202ENST00000378307 KRT28Q7Z3Y7 464 aa22.17■■□□□ 1.14
RAB4B-202ENST00000378307 TRPM1Q7Z4N2 1603 aa22.17■■□□□ 1.14
RAB4B-202ENST00000378307 ANKARQ7Z5J8 1434 aa22.16■■□□□ 1.14
RAB4B-202ENST00000378307 COL22A1Q8NFW1 1626 aaPredicted RBP22.16■■□□□ 1.14
RAB4B-202ENST00000378307 TULP4Q9NRJ4 1543 aa22.15■■□□□ 1.14
RAB4B-202ENST00000378307 ADAMTS2O95450 1211 aa22.14■■□□□ 1.13
RAB4B-202ENST00000378307 SPATA31A3Q5VYP0 1347 aa22.13■■□□□ 1.13
RAB4B-202ENST00000378307 AFF2P51816 1311 aa22.12■■□□□ 1.13
RAB4B-202ENST00000378307 C8orf37Q96NL8 207 aa22.12■■□□□ 1.13
RAB4B-202ENST00000378307 CDK19Q9BWU1 502 aa22.12■■□□□ 1.13
RAB4B-202ENST00000378307 NUDT16Q96DE0 195 aaKnown RBP22.1■■□□□ 1.13
RAB4B-202ENST00000378307 ATP7BP35670 1465 aa22.09■■□□□ 1.13
RAB4B-202ENST00000378307 PSME1Q06323 249 aa22.09■■□□□ 1.13
RAB4B-202ENST00000378307 ZNF772Q68DY9 489 aaPredicted RBP22.09■■□□□ 1.13
RAB4B-202ENST00000378307 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.13
RAB4B-202ENST00000378307 EIF3AQ14152 1382 aaKnown RBP22.08■■□□□ 1.12
RAB4B-202ENST00000378307 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
RAB4B-202ENST00000378307 QRICH2Q9H0J4 1663 aa22.07■■□□□ 1.12
RAB4B-202ENST00000378307 TNS3Q68CZ2 1445 aa22.06■■□□□ 1.12
RAB4B-202ENST00000378307 TRPM3Q9HCF6 1732 aaPredicted RBP22.06■■□□□ 1.12
RAB4B-202ENST00000378307 NGLY1Q96IV0 654 aa22.06■■□□□ 1.12
RAB4B-202ENST00000378307 SBNO1A3KN83 1393 aa22.05■■□□□ 1.12
RAB4B-202ENST00000378307 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
RAB4B-202ENST00000378307 PCGF6Q9BYE7 350 aa22.05■■□□□ 1.12
RAB4B-202ENST00000378307 ITSN1Q15811 1721 aa22.04■■□□□ 1.12
RAB4B-202ENST00000378307 MARF1Q9Y4F3 1742 aaKnown RBP22.04■■□□□ 1.12
RAB4B-202ENST00000378307 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
RAB4B-202ENST00000378307 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
RAB4B-202ENST00000378307 NGDNQ8NEJ9 315 aaKnown RBP22.03■■□□□ 1.12
RAB4B-202ENST00000378307 TOPAZ1Q8N9V7 1692 aa22.03■■□□□ 1.12
RAB4B-202ENST00000378307 GPRASP1Q5JY77 1395 aa22.02■■□□□ 1.12
RAB4B-202ENST00000378307 LMOD2Q6P5Q4 547 aa22.02■■□□□ 1.12
RAB4B-202ENST00000378307 CABP2Q9NPB3 220 aa22.02■■□□□ 1.12
RAB4B-202ENST00000378307 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
RAB4B-202ENST00000378307 QTRT2Q9H974 415 aaKnown RBP22.01■■□□□ 1.11
RAB4B-202ENST00000378307 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
RAB4B-202ENST00000378307 CCDC61Q9Y6R9 512 aa22■■□□□ 1.11
RAB4B-202ENST00000378307 RXRBP28702 533 aa21.99■■□□□ 1.11
RAB4B-202ENST00000378307 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
RAB4B-202ENST00000378307 ABCA3Q99758 1704 aa21.99■■□□□ 1.11
RAB4B-202ENST00000378307 USP21Q9UK80 565 aa21.98■■□□□ 1.11
RAB4B-202ENST00000378307 ACEP12821 1306 aa21.98■■□□□ 1.11
RAB4B-202ENST00000378307 PLEKHG3A1L390 1219 aa21.97■■□□□ 1.11
RAB4B-202ENST00000378307 POLR3AO14802 1390 aaPredicted RBP21.97■■□□□ 1.11
RAB4B-202ENST00000378307 ARHGEF10O15013 1369 aa21.97■■□□□ 1.11
RAB4B-202ENST00000378307 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
RAB4B-202ENST00000378307 RALGAPBQ86X10 1494 aa21.96■■□□□ 1.11
RAB4B-202ENST00000378307 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
RAB4B-202ENST00000378307 PAK3O75914 559 aaPredicted RBP21.95■■□□□ 1.1
RAB4B-202ENST00000378307 PPIP5K1Q6PFW1 1433 aa21.94■■□□□ 1.1
RAB4B-202ENST00000378307 CRYBG1Q9Y4K1 1723 aa21.92■■□□□ 1.1
RAB4B-202ENST00000378307 SLIT2O94813 1529 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms