RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 PDILTQ8N807 584 aa17.09■□□□□ 0.33
TRIM13-202ENST00000378182 RNF20Q5VTR2 975 aa17.09■□□□□ 0.33
TRIM13-202ENST00000378182 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
TRIM13-202ENST00000378182 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
TRIM13-202ENST00000378182 CNNM1Q9NRU3 951 aa17.08■□□□□ 0.32
TRIM13-202ENST00000378182 KIF15Q9NS87 1388 aa17.08■□□□□ 0.32
TRIM13-202ENST00000378182 OFD1O75665 1012 aa17.08■□□□□ 0.32
TRIM13-202ENST00000378182 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
TRIM13-202ENST00000378182 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
TRIM13-202ENST00000378182 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
TRIM13-202ENST00000378182 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRIM13-202ENST00000378182 NLRP6P59044 892 aa17.06■□□□□ 0.32
TRIM13-202ENST00000378182 BICDL1Q6ZP65 573 aa17.06■□□□□ 0.32
TRIM13-202ENST00000378182 KRT18P05783 430 aaKnown RBP17.05■□□□□ 0.32
TRIM13-202ENST00000378182 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
TRIM13-202ENST00000378182 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-202ENST00000378182 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
TRIM13-202ENST00000378182 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-202ENST00000378182 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
TRIM13-202ENST00000378182 APAF1O14727 1248 aa17.05■□□□□ 0.32
TRIM13-202ENST00000378182 ZSCAN29Q8IWY8 852 aaPredicted RBP17.05■□□□□ 0.32
TRIM13-202ENST00000378182 MPHOSPH10O00566 681 aaKnown RBP17.05■□□□□ 0.32
TRIM13-202ENST00000378182 SASS6Q6UVJ0 657 aa17.05■□□□□ 0.32
TRIM13-202ENST00000378182 SMC3Q9UQE7 1217 aa17.05■□□□□ 0.32
TRIM13-202ENST00000378182 TTC39AQ5SRH9 613 aa17.04■□□□□ 0.32
TRIM13-202ENST00000378182 GPS2Q13227 327 aa17.04■□□□□ 0.32
TRIM13-202ENST00000378182 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
TRIM13-202ENST00000378182 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
TRIM13-202ENST00000378182 CCDC97Q96F63 343 aaPredicted RBP17.03■□□□□ 0.32
TRIM13-202ENST00000378182 WDR70Q9NW82 654 aa17.03■□□□□ 0.32
TRIM13-202ENST00000378182 MYBBP1AQ9BQG0 1328 aaKnown RBP17.03■□□□□ 0.32
TRIM13-202ENST00000378182 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
TRIM13-202ENST00000378182 SPDYE4A6NLX3 237 aa17.02■□□□□ 0.32
TRIM13-202ENST00000378182 XBP1P17861 261 aa17.02■□□□□ 0.32
TRIM13-202ENST00000378182 MYL6BP14649 208 aa17.02■□□□□ 0.31
TRIM13-202ENST00000378182 CAGE1Q8TC20 777 aa17.02■□□□□ 0.31
TRIM13-202ENST00000378182 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
TRIM13-202ENST00000378182 E9PSI1 815 aa17.01■□□□□ 0.31
TRIM13-202ENST00000378182 ERC2O15083 957 aa17.01■□□□□ 0.31
TRIM13-202ENST00000378182 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
TRIM13-202ENST00000378182 SYCP1Q15431 976 aa17.01■□□□□ 0.31
TRIM13-202ENST00000378182 REC8O95072 547 aa17■□□□□ 0.31
TRIM13-202ENST00000378182 SLC3A2P08195 630 aaKnown RBP17■□□□□ 0.31
TRIM13-202ENST00000378182 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
TRIM13-202ENST00000378182 OLFM4Q6UX06 510 aa17■□□□□ 0.31
TRIM13-202ENST00000378182 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
TRIM13-202ENST00000378182 ZNF771Q7L3S4 317 aaPredicted RBP16.99■□□□□ 0.31
TRIM13-202ENST00000378182 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
TRIM13-202ENST00000378182 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
TRIM13-202ENST00000378182 CABP4P57796 275 aa16.99■□□□□ 0.31
TRIM13-202ENST00000378182 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
TRIM13-202ENST00000378182 GPRASP1Q5JY77 1395 aa16.99■□□□□ 0.31
TRIM13-202ENST00000378182 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
TRIM13-202ENST00000378182 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
TRIM13-202ENST00000378182 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
TRIM13-202ENST00000378182 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
TRIM13-202ENST00000378182 SIL1Q9H173 461 aa16.98■□□□□ 0.31
TRIM13-202ENST00000378182 ROCK1Q13464 1354 aa16.98■□□□□ 0.31
TRIM13-202ENST00000378182 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
TRIM13-202ENST00000378182 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-202ENST00000378182 TTLL12Q14166 644 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-202ENST00000378182 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
TRIM13-202ENST00000378182 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
TRIM13-202ENST00000378182 SART3Q15020 963 aaKnown RBP16.97■□□□□ 0.31
TRIM13-202ENST00000378182 CENPQQ7L2Z9 268 aaPredicted RBP16.97■□□□□ 0.31
TRIM13-202ENST00000378182 PTPRGP23470 1445 aa16.97■□□□□ 0.31
TRIM13-202ENST00000378182 AK7Q96M32 723 aa16.97■□□□□ 0.31
TRIM13-202ENST00000378182 ANKRD62A6NC57 917 aa16.96■□□□□ 0.31
TRIM13-202ENST00000378182 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
TRIM13-202ENST00000378182 CCDC73Q6ZRK6 1079 aa16.95■□□□□ 0.3
TRIM13-202ENST00000378182 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
TRIM13-202ENST00000378182 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
TRIM13-202ENST00000378182 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
TRIM13-202ENST00000378182 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
TRIM13-202ENST00000378182 WIZO95785 1651 aa16.95■□□□□ 0.3
TRIM13-202ENST00000378182 NEFHP12036 1026 aa16.95■□□□□ 0.3
TRIM13-202ENST00000378182 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
TRIM13-202ENST00000378182 NINLQ9Y2I6 1382 aa16.94■□□□□ 0.3
TRIM13-202ENST00000378182 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
TRIM13-202ENST00000378182 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
TRIM13-202ENST00000378182 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
TRIM13-202ENST00000378182 DHX37Q8IY37 1157 aaKnown RBP16.94■□□□□ 0.3
TRIM13-202ENST00000378182 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
TRIM13-202ENST00000378182 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
TRIM13-202ENST00000378182 MAGEC2Q9UBF1 373 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-202ENST00000378182 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
TRIM13-202ENST00000378182 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
TRIM13-202ENST00000378182 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
TRIM13-202ENST00000378182 GNL3LQ9NVN8 582 aaKnown RBP16.93■□□□□ 0.3
TRIM13-202ENST00000378182 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
TRIM13-202ENST00000378182 GRM1Q13255 1194 aa16.92■□□□□ 0.3
TRIM13-202ENST00000378182 CCDC85AQ96PX6 553 aaPredicted RBP16.92■□□□□ 0.3
TRIM13-202ENST00000378182 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
TRIM13-202ENST00000378182 NEBLO76041 1014 aa16.91■□□□□ 0.3
TRIM13-202ENST00000378182 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
TRIM13-202ENST00000378182 RDXP35241 583 aaKnown RBP16.91■□□□□ 0.3
TRIM13-202ENST00000378182 STK3Q13188 491 aa16.91■□□□□ 0.3
TRIM13-202ENST00000378182 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
TRIM13-202ENST00000378182 PLCD3Q8N3E9 789 aa16.91■□□□□ 0.3
TRIM13-202ENST00000378182 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms