RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.69
CRNKL1-202ENST00000377340 AIMP1Q12904 312 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 ADAMTS8Q9UP79 889 aa10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 TSPYL4Q9UJ04 414 aa10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 FAM177BA6PVY3 158 aa10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 PPP1R1BQ9UD71 204 aaPredicted RBP10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 TSPOAP1O95153 1857 aa10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 SF3B2Q13435 895 aaKnown RBP10.76□□□□□ -0.69
CRNKL1-202ENST00000377340 CABLES1Q8TDN4 633 aa10.75□□□□□ -0.69
CRNKL1-202ENST00000377340 G3V3G9 751 aa10.75□□□□□ -0.69
CRNKL1-202ENST00000377340 PPP2R1AP30153 589 aa10.75□□□□□ -0.69
CRNKL1-202ENST00000377340 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
CRNKL1-202ENST00000377340 USHBP1Q8N6Y0 703 aa10.75□□□□□ -0.69
CRNKL1-202ENST00000377340 ATP10AO60312 1499 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 GORABQ5T7V8 394 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 ATAD2Q6PL18 1390 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 ZNF530Q6P9A1 599 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 MSH6P52701 1360 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 KCNJ4P48050 445 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 PLIN1O60240 522 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 PLEKHO1Q53GL0 409 aaPredicted RBP10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 TCP11L2Q8N4U5 519 aa10.74□□□□□ -0.69
CRNKL1-202ENST00000377340 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-202ENST00000377340 FRAT2O75474 233 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-202ENST00000377340 RUNDC1Q96C34 613 aa10.73□□□□□ -0.69
CRNKL1-202ENST00000377340 RIMS2Q9UQ26 1411 aa10.73□□□□□ -0.69
CRNKL1-202ENST00000377340 ACEP12821 1306 aa10.72□□□□□ -0.69
CRNKL1-202ENST00000377340 C19orf44Q9H6X5 657 aa10.72□□□□□ -0.69
CRNKL1-202ENST00000377340 DUOX2Q9NRD8 1548 aa10.72□□□□□ -0.69
CRNKL1-202ENST00000377340 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
CRNKL1-202ENST00000377340 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
CRNKL1-202ENST00000377340 ISY1Q9ULR0 285 aaKnown RBP10.71□□□□□ -0.69
CRNKL1-202ENST00000377340 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.69
CRNKL1-202ENST00000377340 C8orf37Q96NL8 207 aa10.71□□□□□ -0.69
CRNKL1-202ENST00000377340 NAP1L2Q9ULW6 460 aaPredicted RBP10.71□□□□□ -0.7
CRNKL1-202ENST00000377340 KCNH5Q8NCM2 988 aa10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 LTKP29376 864 aa10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 UHRF1BP1Q6BDS2 1440 aa10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 FGD1P98174 961 aa10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 C9orf78Q9NZ63 289 aaPredicted RBP10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
CRNKL1-202ENST00000377340 CABP4P57796 275 aa10.69□□□□□ -0.7
CRNKL1-202ENST00000377340 NSD3Q9BZ95 1437 aa10.69□□□□□ -0.7
CRNKL1-202ENST00000377340 GAS2L2Q8NHY3 880 aa10.69□□□□□ -0.7
CRNKL1-202ENST00000377340 WDR97A6NE52 1622 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 E9PSI1 815 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 TBX22Q9Y458 520 aa10.68□□□□□ -0.7
CRNKL1-202ENST00000377340 NEO1Q92859 1461 aa10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 EIF5BO60841 1220 aaKnown RBP10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 GNAI1P63096 354 aa10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 SPG7Q9UQ90 795 aa10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
CRNKL1-202ENST00000377340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 THUMPD2Q9BTF0 503 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 NPHP3Q7Z494 1330 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 MPRIPQ6WCQ1 1025 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 MIS18AQ9NYP9 233 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 ATP7AQ04656 1500 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 TSR2Q969E8 191 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
CRNKL1-202ENST00000377340 DCTN1Q14203 1278 aa10.65□□□□□ -0.7
CRNKL1-202ENST00000377340 CCDC184Q52MB2 194 aa10.65□□□□□ -0.7
CRNKL1-202ENST00000377340 DDX58O95786 925 aaKnown RBP10.65□□□□□ -0.71
CRNKL1-202ENST00000377340 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.71
CRNKL1-202ENST00000377340 RPRD2Q5VT52 1461 aaKnown RBP10.65□□□□□ -0.71
CRNKL1-202ENST00000377340 SAMD9Q5K651 1589 aa10.64□□□□□ -0.71
CRNKL1-202ENST00000377340 HMMRO75330 724 aa10.64□□□□□ -0.71
CRNKL1-202ENST00000377340 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
CRNKL1-202ENST00000377340 MYL6BP14649 208 aa10.64□□□□□ -0.71
CRNKL1-202ENST00000377340 EXOC5O00471 708 aa10.63□□□□□ -0.71
CRNKL1-202ENST00000377340 RWDD1Q9H446 243 aaPredicted RBP10.63□□□□□ -0.71
CRNKL1-202ENST00000377340 ABCA8O94911 1581 aa10.63□□□□□ -0.71
CRNKL1-202ENST00000377340 TRIM6-TRIM34B2RNG4 842 aa10.63□□□□□ -0.71
CRNKL1-202ENST00000377340 HSP90AB2PQ58FF8 381 aa10.63□□□□□ -0.71
CRNKL1-202ENST00000377340 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
CRNKL1-202ENST00000377340 MCM10Q7L590 875 aa10.62□□□□□ -0.71
CRNKL1-202ENST00000377340 SLAIN2Q9P270 581 aa10.62□□□□□ -0.71
CRNKL1-202ENST00000377340 ZFYVE16Q7Z3T8 1539 aa10.62□□□□□ -0.71
CRNKL1-202ENST00000377340 HDGFL1Q5TGJ6 251 aa10.62□□□□□ -0.71
CRNKL1-202ENST00000377340 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
CRNKL1-202ENST00000377340 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
CRNKL1-202ENST00000377340 BICDL1Q6ZP65 573 aa10.61□□□□□ -0.71
CRNKL1-202ENST00000377340 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
CRNKL1-202ENST00000377340 LRRC59Q96AG4 307 aaKnown RBP10.61□□□□□ -0.71
CRNKL1-202ENST00000377340 SCAF11Q99590 1463 aaKnown RBP10.6□□□□□ -0.71
CRNKL1-202ENST00000377340 ANKRD24Q8TF21 1146 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms