RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
DFFA-202ENST00000377038 DHX29Q7Z478 1369 aaKnown RBP16.55■□□□□ 0.24
DFFA-202ENST00000377038 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
DFFA-202ENST00000377038 RILPL2Q969X0 211 aa16.54■□□□□ 0.24
DFFA-202ENST00000377038 KIAA0556O60303 1618 aa16.54■□□□□ 0.24
DFFA-202ENST00000377038 PLCH2O75038 1416 aa16.54■□□□□ 0.24
DFFA-202ENST00000377038 FAM135AQ9P2D6 1515 aa16.54■□□□□ 0.24
DFFA-202ENST00000377038 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
DFFA-202ENST00000377038 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
DFFA-202ENST00000377038 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
DFFA-202ENST00000377038 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
DFFA-202ENST00000377038 WDR62O43379 1518 aa16.53■□□□□ 0.24
DFFA-202ENST00000377038 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
DFFA-202ENST00000377038 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
DFFA-202ENST00000377038 ADGRF5Q8IZF2 1346 aa16.52■□□□□ 0.24
DFFA-202ENST00000377038 SLKQ9H2G2 1235 aaPredicted RBP16.52■□□□□ 0.24
DFFA-202ENST00000377038 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
DFFA-202ENST00000377038 WDR7Q9Y4E6 1490 aa16.52■□□□□ 0.23
DFFA-202ENST00000377038 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
DFFA-202ENST00000377038 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
DFFA-202ENST00000377038 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
DFFA-202ENST00000377038 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
DFFA-202ENST00000377038 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
DFFA-202ENST00000377038 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
DFFA-202ENST00000377038 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
DFFA-202ENST00000377038 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
DFFA-202ENST00000377038 TATP17735 454 aaPredicted RBP16.49■□□□□ 0.23
DFFA-202ENST00000377038 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
DFFA-202ENST00000377038 CDCA7LQ96GN5 454 aa16.49■□□□□ 0.23
DFFA-202ENST00000377038 NSD3Q9BZ95 1437 aa16.49■□□□□ 0.23
DFFA-202ENST00000377038 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
DFFA-202ENST00000377038 TOM1L2Q6ZVM7 507 aa16.49■□□□□ 0.23
DFFA-202ENST00000377038 SYCP2Q9BX26 1530 aa16.48■□□□□ 0.23
DFFA-202ENST00000377038 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
DFFA-202ENST00000377038 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
DFFA-202ENST00000377038 NOS1P29475 1434 aa16.47■□□□□ 0.23
DFFA-202ENST00000377038 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
DFFA-202ENST00000377038 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
DFFA-202ENST00000377038 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
DFFA-202ENST00000377038 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
DFFA-202ENST00000377038 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
DFFA-202ENST00000377038 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
DFFA-202ENST00000377038 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
DFFA-202ENST00000377038 RBM33Q96EV2 1170 aaKnown RBP16.45■□□□□ 0.22
DFFA-202ENST00000377038 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
DFFA-202ENST00000377038 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
DFFA-202ENST00000377038 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
DFFA-202ENST00000377038 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
DFFA-202ENST00000377038 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
DFFA-202ENST00000377038 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
DFFA-202ENST00000377038 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
DFFA-202ENST00000377038 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
DFFA-202ENST00000377038 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
DFFA-202ENST00000377038 ZC3H6P61129 1189 aaKnown RBP16.43■□□□□ 0.22
DFFA-202ENST00000377038 ZNF518AQ6AHZ1 1483 aa16.43■□□□□ 0.22
DFFA-202ENST00000377038 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
DFFA-202ENST00000377038 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
DFFA-202ENST00000377038 ST18O60284 1047 aa16.42■□□□□ 0.22
DFFA-202ENST00000377038 PTPRKQ15262 1439 aa16.42■□□□□ 0.22
DFFA-202ENST00000377038 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
DFFA-202ENST00000377038 A2MP01023 1474 aa16.42■□□□□ 0.22
DFFA-202ENST00000377038 RPRD2Q5VT52 1461 aaKnown RBP16.42■□□□□ 0.22
DFFA-202ENST00000377038 GOLGA6L6A8MZA4 724 aa16.42■□□□□ 0.22
DFFA-202ENST00000377038 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
DFFA-202ENST00000377038 TNRQ92752 1358 aa16.41■□□□□ 0.22
DFFA-202ENST00000377038 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
DFFA-202ENST00000377038 DNTTIP2Q5QJE6 756 aaKnown RBP16.41■□□□□ 0.22
DFFA-202ENST00000377038 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
DFFA-202ENST00000377038 NUP160Q12769 1436 aa16.41■□□□□ 0.22
DFFA-202ENST00000377038 VPS37DQ86XT2 251 aa16.41■□□□□ 0.22
DFFA-202ENST00000377038 SPG7Q9UQ90 795 aa16.41■□□□□ 0.22
DFFA-202ENST00000377038 PDE4AP27815 886 aa16.4■□□□□ 0.22
DFFA-202ENST00000377038 CABP4P57796 275 aa16.4■□□□□ 0.22
DFFA-202ENST00000377038 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
DFFA-202ENST00000377038 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
DFFA-202ENST00000377038 WASLO00401 505 aaPredicted RBP16.4■□□□□ 0.22
DFFA-202ENST00000377038 LRRFIP1Q32MZ4 808 aaKnown RBP16.39■□□□□ 0.21
DFFA-202ENST00000377038 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
DFFA-202ENST00000377038 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
DFFA-202ENST00000377038 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
DFFA-202ENST00000377038 HSP90AB4PQ58FF6 505 aa16.38■□□□□ 0.21
DFFA-202ENST00000377038 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
DFFA-202ENST00000377038 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
DFFA-202ENST00000377038 NME9Q86XW9 330 aa16.38■□□□□ 0.21
DFFA-202ENST00000377038 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
DFFA-202ENST00000377038 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
DFFA-202ENST00000377038 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
DFFA-202ENST00000377038 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
DFFA-202ENST00000377038 SCAF11Q99590 1463 aaKnown RBP16.37■□□□□ 0.21
DFFA-202ENST00000377038 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
DFFA-202ENST00000377038 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
DFFA-202ENST00000377038 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
DFFA-202ENST00000377038 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
DFFA-202ENST00000377038 FOXO3O43524 673 aa16.36■□□□□ 0.21
DFFA-202ENST00000377038 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
DFFA-202ENST00000377038 FBXW7Q969H0 707 aa16.36■□□□□ 0.21
DFFA-202ENST00000377038 FCHSD2O94868 740 aa16.36■□□□□ 0.21
DFFA-202ENST00000377038 CLSTN1O94985 981 aa16.36■□□□□ 0.21
DFFA-202ENST00000377038 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
DFFA-202ENST00000377038 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms