RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DDRGK1Q96HY6 314 aa14.82□□□□□ -0.04
DDR1-227ENST00000376570 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
DDR1-227ENST00000376570 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
DDR1-227ENST00000376570 BRPF3Q9ULD4 1205 aa14.81□□□□□ -0.04
DDR1-227ENST00000376570 ZKSCAN2Q63HK3 967 aa14.81□□□□□ -0.04
DDR1-227ENST00000376570 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
DDR1-227ENST00000376570 BACH2Q9BYV9 841 aa14.8□□□□□ -0.04
DDR1-227ENST00000376570 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
DDR1-227ENST00000376570 DZIP1LQ8IYY4 767 aaKnown RBP14.8□□□□□ -0.04
DDR1-227ENST00000376570 PLA2R1Q13018 1463 aa14.8□□□□□ -0.04
DDR1-227ENST00000376570 RLBP1P12271 317 aa14.79□□□□□ -0.04
DDR1-227ENST00000376570 FOXD4L6Q3SYB3 417 aaPredicted RBP14.79□□□□□ -0.04
DDR1-227ENST00000376570 FOXD4L3Q6VB84 417 aaPredicted RBP14.79□□□□□ -0.04
DDR1-227ENST00000376570 RWDD1Q9H446 243 aaPredicted RBP14.79□□□□□ -0.04
DDR1-227ENST00000376570 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
DDR1-227ENST00000376570 EIF2S2P20042 333 aaKnown RBP14.78□□□□□ -0.04
DDR1-227ENST00000376570 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
DDR1-227ENST00000376570 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
DDR1-227ENST00000376570 PARD3Q8TEW0 1356 aa14.78□□□□□ -0.04
DDR1-227ENST00000376570 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
DDR1-227ENST00000376570 RTF1Q92541 710 aaKnown RBP14.78□□□□□ -0.04
DDR1-227ENST00000376570 ZNF330Q9Y3S2 320 aaPredicted RBP14.78□□□□□ -0.04
DDR1-227ENST00000376570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.78□□□□□ -0.046e-7■■■■□ 21.9
DDR1-227ENST00000376570 TTC37Q6PGP7 1564 aa14.77□□□□□ -0.05
DDR1-227ENST00000376570 KRT24Q2M2I5 525 aa14.77□□□□□ -0.05
DDR1-227ENST00000376570 MCM10Q7L590 875 aa14.76□□□□□ -0.05
DDR1-227ENST00000376570 BECN1Q14457 450 aa14.76□□□□□ -0.05
DDR1-227ENST00000376570 C14orf93Q9H972 538 aaKnown RBP14.76□□□□□ -0.05
DDR1-227ENST00000376570 SSH1Q8WYL5 1049 aa14.76□□□□□ -0.05
DDR1-227ENST00000376570 ITSN2Q9NZM3 1697 aa14.75□□□□□ -0.05
DDR1-227ENST00000376570 USHBP1Q8N6Y0 703 aa14.75□□□□□ -0.05
DDR1-227ENST00000376570 BCORL1Q5H9F3 1711 aa14.75□□□□□ -0.05
DDR1-227ENST00000376570 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
DDR1-227ENST00000376570 GCC2Q8IWJ2 1684 aa14.75□□□□□ -0.05
DDR1-227ENST00000376570 TMPOP42166 694 aaKnown RBP14.75□□□□□ -0.05
DDR1-227ENST00000376570 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
DDR1-227ENST00000376570 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
DDR1-227ENST00000376570 NLRP6P59044 892 aa14.74□□□□□ -0.05
DDR1-227ENST00000376570 RARSP54136 660 aaKnown RBP14.73□□□□□ -0.05
DDR1-227ENST00000376570 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
DDR1-227ENST00000376570 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
DDR1-227ENST00000376570 FYB1O15117 783 aa14.73□□□□□ -0.05
DDR1-227ENST00000376570 HSP90AB1P08238 724 aaKnown RBP14.73□□□□□ -0.05
DDR1-227ENST00000376570 SCAF11Q99590 1463 aaKnown RBP14.73□□□□□ -0.05
DDR1-227ENST00000376570 TMEM57Q8N5G2 664 aa14.72□□□□□ -0.05
DDR1-227ENST00000376570 ADGRL2O95490 1459 aa14.72□□□□□ -0.05
DDR1-227ENST00000376570 SEC24BO95487 1268 aa14.72□□□□□ -0.05
DDR1-227ENST00000376570 AEBP1Q8IUX7 1158 aa14.72□□□□□ -0.05
DDR1-227ENST00000376570 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
DDR1-227ENST00000376570 IPO8O15397 1037 aaKnown RBP14.71□□□□□ -0.05
DDR1-227ENST00000376570 ABCA8O94911 1581 aa14.71□□□□□ -0.05
DDR1-227ENST00000376570 NUDT16Q96DE0 195 aaKnown RBP14.71□□□□□ -0.05
DDR1-227ENST00000376570 PHACTR3Q96KR7 559 aa14.71□□□□□ -0.05
DDR1-227ENST00000376570 WDR7Q9Y4E6 1490 aa14.7□□□□□ -0.06
DDR1-227ENST00000376570 OS9Q13438 667 aaPredicted RBP14.7□□□□□ -0.06
DDR1-227ENST00000376570 ABCC2Q92887 1545 aa14.7□□□□□ -0.06
DDR1-227ENST00000376570 PRKCSHP14314 528 aaPredicted RBP14.69□□□□□ -0.06
DDR1-227ENST00000376570 SLC52A1Q9NWF4 448 aa14.69□□□□□ -0.06
DDR1-227ENST00000376570 HDGFP51858 240 aaKnown RBP14.68□□□□□ -0.06
DDR1-227ENST00000376570 NFKBIBQ15653 356 aa14.68□□□□□ -0.06
DDR1-227ENST00000376570 TSPYL6Q8N831 410 aa14.68□□□□□ -0.06
DDR1-227ENST00000376570 DUOX2Q9NRD8 1548 aa14.68□□□□□ -0.06
DDR1-227ENST00000376570 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
DDR1-227ENST00000376570 F6X3S4 739 aa14.67□□□□□ -0.06
DDR1-227ENST00000376570 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
DDR1-227ENST00000376570 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
DDR1-227ENST00000376570 CHD1O14646 1710 aa14.66□□□□□ -0.06
DDR1-227ENST00000376570 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
DDR1-227ENST00000376570 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
DDR1-227ENST00000376570 TRIM6-TRIM34B2RNG4 842 aa14.66□□□□□ -0.06
DDR1-227ENST00000376570 TRIM27P14373 513 aa14.66□□□□□ -0.06
DDR1-227ENST00000376570 GSE1Q14687 1217 aa14.66□□□□□ -0.06
DDR1-227ENST00000376570 TWISTNBQ3B726 338 aaPredicted RBP14.66□□□□□ -0.06
DDR1-227ENST00000376570 CDC42BPAQ5VT25 1732 aa14.65□□□□□ -0.06
DDR1-227ENST00000376570 ABTB2Q8N961 1025 aa14.65□□□□□ -0.06
DDR1-227ENST00000376570 RTEL1-TNFRSF6BF6WH68 1400 aa14.65□□□□□ -0.06
DDR1-227ENST00000376570 FOXO3O43524 673 aa14.65□□□□□ -0.06
DDR1-227ENST00000376570 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
DDR1-227ENST00000376570 COL17A1Q9UMD9 1497 aaPredicted RBP14.65□□□□□ -0.06
DDR1-227ENST00000376570 SMARCA5O60264 1052 aaPredicted RBP14.65□□□□□ -0.06
DDR1-227ENST00000376570 TSHZ3Q63HK5 1081 aa14.65□□□□□ -0.06
DDR1-227ENST00000376570 HSCBQ8IWL3 235 aa14.65□□□□□ -0.06
DDR1-227ENST00000376570 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
DDR1-227ENST00000376570 TSPYL4Q9UJ04 414 aa14.64□□□□□ -0.07
DDR1-227ENST00000376570 RILPL2Q969X0 211 aa14.64□□□□□ -0.07
DDR1-227ENST00000376570 ATAD2Q6PL18 1390 aa14.64□□□□□ -0.07
DDR1-227ENST00000376570 MS4A1P11836 297 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 FKBP5Q13451 457 aaPredicted RBP14.63□□□□□ -0.07
DDR1-227ENST00000376570 ANXA1P04083 346 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 ESCO1Q5FWF5 840 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 AIMP1Q12904 312 aaKnown RBP14.63□□□□□ -0.07
DDR1-227ENST00000376570 ATF7IPQ6VMQ6 1270 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 SHANK2Q9UPX8 1470 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 KDM5CP41229 1560 aa14.63□□□□□ -0.07
DDR1-227ENST00000376570 DTNBO60941 627 aa14.62□□□□□ -0.07
DDR1-227ENST00000376570 NAP1L5Q96NT1 182 aaPredicted RBP14.62□□□□□ -0.07
DDR1-227ENST00000376570 PSME1Q06323 249 aa14.62□□□□□ -0.07
DDR1-227ENST00000376570 MVPQ14764 893 aaKnown RBP14.62□□□□□ -0.07
DDR1-227ENST00000376570 ATP10AO60312 1499 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms