RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 SIRT1Q96EB6 747 aa20.75■□□□□ 0.91
CLCN6-203ENST00000376490 ORAI2Q96SN7 254 aa20.74■□□□□ 0.91
CLCN6-203ENST00000376490 JCADQ9P266 1359 aa20.73■□□□□ 0.91
CLCN6-203ENST00000376490 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
CLCN6-203ENST00000376490 RGPD8O14715 1765 aaPredicted RBP20.72■□□□□ 0.91
CLCN6-203ENST00000376490 SIN3AQ96ST3 1273 aa20.72■□□□□ 0.91
CLCN6-203ENST00000376490 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
CLCN6-203ENST00000376490 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
CLCN6-203ENST00000376490 NUTM2FA1L443 756 aa20.71■□□□□ 0.91
CLCN6-203ENST00000376490 SAFB2Q14151 953 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLCN6-203ENST00000376490 PRAM1Q96QH2 718 aa20.7■□□□□ 0.9
CLCN6-203ENST00000376490 TRAK1Q9UPV9 953 aa20.7■□□□□ 0.9
CLCN6-203ENST00000376490 SHPRHQ149N8 1683 aa20.69■□□□□ 0.9
CLCN6-203ENST00000376490 FMN2Q9NZ56 1722 aa20.69■□□□□ 0.9
CLCN6-203ENST00000376490 ESCO1Q5FWF5 840 aa20.68■□□□□ 0.9
CLCN6-203ENST00000376490 POGKQ9P215 609 aa20.68■□□□□ 0.9
CLCN6-203ENST00000376490 NEUROD1Q13562 356 aa20.67■□□□□ 0.9
CLCN6-203ENST00000376490 DLC1Q96QB1 1528 aa20.67■□□□□ 0.9
CLCN6-203ENST00000376490 LRRC59Q96AG4 307 aaKnown RBP20.66■□□□□ 0.9
CLCN6-203ENST00000376490 RGS17Q9UGC6 210 aaPredicted RBP20.66■□□□□ 0.9
CLCN6-203ENST00000376490 KIAA1210Q9ULL0 1709 aa20.65■□□□□ 0.9
CLCN6-203ENST00000376490 L3MBTL2Q969R5 705 aa20.64■□□□□ 0.89
CLCN6-203ENST00000376490 SPATA31A6Q5VVP1 1343 aa20.63■□□□□ 0.89
CLCN6-203ENST00000376490 ARHGEF28Q8N1W1 1705 aaKnown RBP20.62■□□□□ 0.89
CLCN6-203ENST00000376490 LRP6O75581 1613 aa20.61■□□□□ 0.89
CLCN6-203ENST00000376490 SOS2Q07890 1332 aaPredicted RBP20.61■□□□□ 0.89
CLCN6-203ENST00000376490 NUTM2BA6NNL0 878 aaPredicted RBP20.61■□□□□ 0.89
CLCN6-203ENST00000376490 NUTM2EB1AL46 878 aaPredicted RBP20.61■□□□□ 0.89
CLCN6-203ENST00000376490 FOXO3O43524 673 aa20.61■□□□□ 0.89
CLCN6-203ENST00000376490 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
CLCN6-203ENST00000376490 NUTM2AQ8IVF1 878 aaPredicted RBP20.61■□□□□ 0.89
CLCN6-203ENST00000376490 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
CLCN6-203ENST00000376490 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
CLCN6-203ENST00000376490 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
CLCN6-203ENST00000376490 PNPLA6Q8IY17 1366 aa20.58■□□□□ 0.88
CLCN6-203ENST00000376490 SOCS7O14512 581 aa20.57■□□□□ 0.88
CLCN6-203ENST00000376490 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
CLCN6-203ENST00000376490 USP32Q8NFA0 1604 aa20.56■□□□□ 0.88
CLCN6-203ENST00000376490 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
CLCN6-203ENST00000376490 POTEAQ6S8J7 498 aa20.56■□□□□ 0.88
CLCN6-203ENST00000376490 ADGRB2O60241 1585 aa20.55■□□□□ 0.88
CLCN6-203ENST00000376490 KIF1AQ12756 1690 aa20.55■□□□□ 0.88
CLCN6-203ENST00000376490 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
CLCN6-203ENST00000376490 PXDNQ92626 1479 aa20.54■□□□□ 0.88
CLCN6-203ENST00000376490 WASLO00401 505 aaPredicted RBP20.52■□□□□ 0.88
CLCN6-203ENST00000376490 TRPM1Q7Z4N2 1603 aa20.52■□□□□ 0.88
CLCN6-203ENST00000376490 KRT28Q7Z3Y7 464 aa20.51■□□□□ 0.87
CLCN6-203ENST00000376490 PMFBP1Q8TBY8 1022 aa20.5■□□□□ 0.87
CLCN6-203ENST00000376490 PRR36Q9H6K5 1346 aa20.5■□□□□ 0.87
CLCN6-203ENST00000376490 ANKARQ7Z5J8 1434 aa20.49■□□□□ 0.87
CLCN6-203ENST00000376490 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
CLCN6-203ENST00000376490 ADAMTS2O95450 1211 aa20.48■□□□□ 0.87
CLCN6-203ENST00000376490 PSME1Q06323 249 aa20.47■□□□□ 0.87
CLCN6-203ENST00000376490 NBPF8Q3BBV2 869 aa20.47■□□□□ 0.87
CLCN6-203ENST00000376490 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
CLCN6-203ENST00000376490 C8orf37Q96NL8 207 aa20.46■□□□□ 0.87
CLCN6-203ENST00000376490 CDK19Q9BWU1 502 aa20.46■□□□□ 0.87
CLCN6-203ENST00000376490 SPATA31A3Q5VYP0 1347 aa20.46■□□□□ 0.87
CLCN6-203ENST00000376490 MARF1Q9Y4F3 1742 aaKnown RBP20.45■□□□□ 0.86
CLCN6-203ENST00000376490 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
CLCN6-203ENST00000376490 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
CLCN6-203ENST00000376490 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
CLCN6-203ENST00000376490 NUDT16Q96DE0 195 aaKnown RBP20.44■□□□□ 0.86
CLCN6-203ENST00000376490 AFF2P51816 1311 aa20.44■□□□□ 0.86
CLCN6-203ENST00000376490 QRICH2Q9H0J4 1663 aa20.44■□□□□ 0.86
CLCN6-203ENST00000376490 NGLY1Q96IV0 654 aa20.43■□□□□ 0.86
CLCN6-203ENST00000376490 CENPJQ9HC77 1338 aaPredicted RBP20.43■□□□□ 0.86
CLCN6-203ENST00000376490 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
CLCN6-203ENST00000376490 TONSLQ96HA7 1378 aa20.42■□□□□ 0.86
CLCN6-203ENST00000376490 ROCK2O75116 1388 aaKnown RBP20.41■□□□□ 0.86
CLCN6-203ENST00000376490 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
CLCN6-203ENST00000376490 TRPM3Q9HCF6 1732 aaPredicted RBP20.4■□□□□ 0.86
CLCN6-203ENST00000376490 ATP7BP35670 1465 aa20.39■□□□□ 0.85
CLCN6-203ENST00000376490 PLEKHG5O94827 1062 aa20.39■□□□□ 0.85
CLCN6-203ENST00000376490 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.85
CLCN6-203ENST00000376490 TNS3Q68CZ2 1445 aa20.38■□□□□ 0.85
CLCN6-203ENST00000376490 SBNO1A3KN83 1393 aa20.38■□□□□ 0.85
CLCN6-203ENST00000376490 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
CLCN6-203ENST00000376490 CABLES1Q8TDN4 633 aa20.37■□□□□ 0.85
CLCN6-203ENST00000376490 TOPAZ1Q8N9V7 1692 aa20.37■□□□□ 0.85
CLCN6-203ENST00000376490 SRPK2P78362 688 aaKnown RBP20.36■□□□□ 0.85
CLCN6-203ENST00000376490 QTRT2Q9H974 415 aaKnown RBP20.36■□□□□ 0.85
CLCN6-203ENST00000376490 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
CLCN6-203ENST00000376490 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
CLCN6-203ENST00000376490 ALS2Q96Q42 1657 aa20.35■□□□□ 0.85
CLCN6-203ENST00000376490 RXRBP28702 533 aa20.35■□□□□ 0.85
CLCN6-203ENST00000376490 USP21Q9UK80 565 aa20.34■□□□□ 0.85
CLCN6-203ENST00000376490 ABCA3Q99758 1704 aa20.33■□□□□ 0.85
CLCN6-203ENST00000376490 PAK3O75914 559 aaPredicted RBP20.33■□□□□ 0.85
CLCN6-203ENST00000376490 FNBP4Q8N3X1 1017 aaPredicted RBP20.33■□□□□ 0.85
CLCN6-203ENST00000376490 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.85
CLCN6-203ENST00000376490 ARHGEF10O15013 1369 aa20.33■□□□□ 0.84
CLCN6-203ENST00000376490 ACEP12821 1306 aa20.32■□□□□ 0.84
CLCN6-203ENST00000376490 PLEKHG3A1L390 1219 aa20.32■□□□□ 0.84
CLCN6-203ENST00000376490 HAP1P54257 671 aaPredicted RBP20.32■□□□□ 0.84
CLCN6-203ENST00000376490 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
CLCN6-203ENST00000376490 EVC2Q86UK5 1308 aa20.29■□□□□ 0.84
CLCN6-203ENST00000376490 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
CLCN6-203ENST00000376490 PPIP5K1Q6PFW1 1433 aa20.28■□□□□ 0.84
CLCN6-203ENST00000376490 RBM6P78332 1123 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms