RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 ADGRL3Q9HAR2 1447 aa25.01■■□□□ 1.59
C6orf48-207ENST00000375642 NBPF1Q3BBV0 1214 aa24.99■■□□□ 1.59
C6orf48-207ENST00000375642 DCCP43146 1447 aa24.98■■□□□ 1.59
C6orf48-207ENST00000375642 PRAM1Q96QH2 718 aa24.98■■□□□ 1.59
C6orf48-207ENST00000375642 POGKQ9P215 609 aa24.98■■□□□ 1.59
C6orf48-207ENST00000375642 PLEKHH1Q9ULM0 1364 aa24.97■■□□□ 1.59
C6orf48-207ENST00000375642 KNDC1Q76NI1 1749 aa24.96■■□□□ 1.59
C6orf48-207ENST00000375642 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.96■■□□□ 1.59
C6orf48-207ENST00000375642 KIAA1210Q9ULL0 1709 aa24.95■■□□□ 1.59
C6orf48-207ENST00000375642 NBPF8Q3BBV2 869 aa24.95■■□□□ 1.58
C6orf48-207ENST00000375642 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
C6orf48-207ENST00000375642 DLC1Q96QB1 1528 aa24.94■■□□□ 1.58
C6orf48-207ENST00000375642 SAFB2Q14151 953 aaKnown RBP eCLIP24.93■■□□□ 1.58
C6orf48-207ENST00000375642 NALCNQ8IZF0 1738 aa24.91■■□□□ 1.58
C6orf48-207ENST00000375642 ROCK2O75116 1388 aaKnown RBP24.9■■□□□ 1.58
C6orf48-207ENST00000375642 JCADQ9P266 1359 aa24.9■■□□□ 1.58
C6orf48-207ENST00000375642 PHLPP1O60346 1717 aa24.89■■□□□ 1.58
C6orf48-207ENST00000375642 MST1RQ04912 1400 aa24.87■■□□□ 1.57
C6orf48-207ENST00000375642 TRPM1Q7Z4N2 1603 aa24.85■■□□□ 1.57
C6orf48-207ENST00000375642 BRINP3Q76B58 766 aa24.84■■□□□ 1.57
C6orf48-207ENST00000375642 CDC42BPGQ6DT37 1551 aa24.84■■□□□ 1.57
C6orf48-207ENST00000375642 MINK1Q8N4C8 1332 aaPredicted RBP24.84■■□□□ 1.57
C6orf48-207ENST00000375642 HIRIP3Q9BW71 556 aaPredicted RBP24.83■■□□□ 1.57
C6orf48-207ENST00000375642 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.56
C6orf48-207ENST00000375642 MEX3CQ5U5Q3 659 aaKnown RBP24.82■■□□□ 1.56
C6orf48-207ENST00000375642 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
C6orf48-207ENST00000375642 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
C6orf48-207ENST00000375642 NUTM2FA1L443 756 aa24.81■■□□□ 1.56
C6orf48-207ENST00000375642 RALGAPBQ86X10 1494 aa24.8■■□□□ 1.56
C6orf48-207ENST00000375642 CENPJQ9HC77 1338 aaPredicted RBP24.8■■□□□ 1.56
C6orf48-207ENST00000375642 ARHGEF28Q8N1W1 1705 aaKnown RBP24.79■■□□□ 1.56
C6orf48-207ENST00000375642 ORAI2Q96SN7 254 aa24.78■■□□□ 1.56
C6orf48-207ENST00000375642 SPATA31A6Q5VVP1 1343 aa24.78■■□□□ 1.56
C6orf48-207ENST00000375642 COL16A1Q07092 1604 aaPredicted RBP24.77■■□□□ 1.56
C6orf48-207ENST00000375642 ESCO1Q5FWF5 840 aa24.77■■□□□ 1.56
C6orf48-207ENST00000375642 ZNF772Q68DY9 489 aaPredicted RBP24.77■■□□□ 1.56
C6orf48-207ENST00000375642 WASLO00401 505 aaPredicted RBP24.76■■□□□ 1.55
C6orf48-207ENST00000375642 EIF3AQ14152 1382 aaKnown RBP24.76■■□□□ 1.55
C6orf48-207ENST00000375642 LRP6O75581 1613 aa24.73■■□□□ 1.55
C6orf48-207ENST00000375642 ADGRB2O60241 1585 aa24.73■■□□□ 1.55
C6orf48-207ENST00000375642 UPF1Q92900 1129 aaKnown RBP eCLIP24.72■■□□□ 1.555e-22■□□□□ 9.9
C6orf48-207ENST00000375642 FMN2Q9NZ56 1722 aa24.71■■□□□ 1.55
C6orf48-207ENST00000375642 CDK19Q9BWU1 502 aa24.7■■□□□ 1.54
C6orf48-207ENST00000375642 ANKARQ7Z5J8 1434 aa24.69■■□□□ 1.54
C6orf48-207ENST00000375642 DDX17Q92841 729 aaKnown RBP24.69■■□□□ 1.54
C6orf48-207ENST00000375642 AHDC1Q5TGY3 1603 aaPredicted RBP24.68■■□□□ 1.54
C6orf48-207ENST00000375642 PHF8Q9UPP1 1060 aa24.67■■□□□ 1.54
C6orf48-207ENST00000375642 SHPRHQ149N8 1683 aa24.66■■□□□ 1.54
C6orf48-207ENST00000375642 FOXO3O43524 673 aa24.66■■□□□ 1.54
C6orf48-207ENST00000375642 NPHP3Q7Z494 1330 aa24.65■■□□□ 1.54
C6orf48-207ENST00000375642 RXRBP28702 533 aa24.65■■□□□ 1.54
C6orf48-207ENST00000375642 NUDT16Q96DE0 195 aaKnown RBP24.65■■□□□ 1.54
C6orf48-207ENST00000375642 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
C6orf48-207ENST00000375642 PRR36Q9H6K5 1346 aa24.64■■□□□ 1.54
C6orf48-207ENST00000375642 SRPK2P78362 688 aaKnown RBP24.64■■□□□ 1.54
C6orf48-207ENST00000375642 EVC2Q86UK5 1308 aa24.63■■□□□ 1.53
C6orf48-207ENST00000375642 LRRC59Q96AG4 307 aaKnown RBP24.63■■□□□ 1.53
C6orf48-207ENST00000375642 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
C6orf48-207ENST00000375642 SOS2Q07890 1332 aaPredicted RBP24.61■■□□□ 1.53
C6orf48-207ENST00000375642 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
C6orf48-207ENST00000375642 CABP2Q9NPB3 220 aa24.61■■□□□ 1.53
C6orf48-207ENST00000375642 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
C6orf48-207ENST00000375642 CDK12Q9NYV4 1490 aaPredicted RBP24.6■■□□□ 1.53
C6orf48-207ENST00000375642 ST20-MTHFSA0A0A6YYL1 179 aa24.6■■□□□ 1.53
C6orf48-207ENST00000375642 CCDC61Q9Y6R9 512 aa24.6■■□□□ 1.53
C6orf48-207ENST00000375642 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
C6orf48-207ENST00000375642 XPCQ01831 940 aaPredicted RBP24.59■■□□□ 1.53
C6orf48-207ENST00000375642 USP32Q8NFA0 1604 aa24.59■■□□□ 1.53
C6orf48-207ENST00000375642 USP47Q96K76 1375 aa24.58■■□□□ 1.53
C6orf48-207ENST00000375642 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.53
C6orf48-207ENST00000375642 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.53
C6orf48-207ENST00000375642 PSME1Q06323 249 aa24.58■■□□□ 1.53
C6orf48-207ENST00000375642 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.53
C6orf48-207ENST00000375642 ATP7BP35670 1465 aa24.58■■□□□ 1.52
C6orf48-207ENST00000375642 KIF1AQ12756 1690 aa24.57■■□□□ 1.52
C6orf48-207ENST00000375642 KRT28Q7Z3Y7 464 aa24.57■■□□□ 1.52
C6orf48-207ENST00000375642 RGPD8O14715 1765 aaPredicted RBP24.57■■□□□ 1.52
C6orf48-207ENST00000375642 SLC24A1O60721 1099 aa24.56■■□□□ 1.52
C6orf48-207ENST00000375642 NGDNQ8NEJ9 315 aaKnown RBP24.56■■□□□ 1.52
C6orf48-207ENST00000375642 PXDNQ92626 1479 aa24.54■■□□□ 1.52
C6orf48-207ENST00000375642 TESK2Q96S53 571 aa24.53■■□□□ 1.52
C6orf48-207ENST00000375642 AFF2P51816 1311 aa24.53■■□□□ 1.52
C6orf48-207ENST00000375642 PLEKHG3A1L390 1219 aa24.52■■□□□ 1.52
C6orf48-207ENST00000375642 PNPLA6Q8IY17 1366 aa24.5■■□□□ 1.51
C6orf48-207ENST00000375642 PPIP5K1Q6PFW1 1433 aa24.5■■□□□ 1.51
C6orf48-207ENST00000375642 CABP1Q9NZU7 370 aa24.49■■□□□ 1.51
C6orf48-207ENST00000375642 ACEP12821 1306 aa24.49■■□□□ 1.51
C6orf48-207ENST00000375642 ITSN1Q15811 1721 aa24.48■■□□□ 1.51
C6orf48-207ENST00000375642 SPATA31A3Q5VYP0 1347 aa24.48■■□□□ 1.51
C6orf48-207ENST00000375642 ATAD2Q6PL18 1390 aa24.48■■□□□ 1.51
C6orf48-207ENST00000375642 SBNO1A3KN83 1393 aa24.47■■□□□ 1.51
C6orf48-207ENST00000375642 POLR3AO14802 1390 aaPredicted RBP24.46■■□□□ 1.51
C6orf48-207ENST00000375642 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.51
C6orf48-207ENST00000375642 PUS7Q96PZ0 661 aaKnown RBP24.46■■□□□ 1.51
C6orf48-207ENST00000375642 TMF1P82094 1093 aa24.45■■□□□ 1.5
C6orf48-207ENST00000375642 RGS12O14924 1447 aa24.44■■□□□ 1.5
C6orf48-207ENST00000375642 TOPAZ1Q8N9V7 1692 aa24.44■■□□□ 1.5
C6orf48-207ENST00000375642 LMOD2Q6P5Q4 547 aa24.44■■□□□ 1.5
C6orf48-207ENST00000375642 C8orf37Q96NL8 207 aa24.44■■□□□ 1.5
C6orf48-207ENST00000375642 PAK3O75914 559 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms