RNA–Protein interactions for RNA: ENST00000375391.5

TMCO3-201, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 1 (best) BASIC

Gene TMCO3, Length 2,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-201ENST00000375391 KNDC1Q76NI1 1749 aa28.17■■■□□ 2.1
TMCO3-201ENST00000375391 NUTM2FA1L443 756 aa28.16■■■□□ 2.1
TMCO3-201ENST00000375391 PIK3R4Q99570 1358 aa28.16■■■□□ 2.1
TMCO3-201ENST00000375391 FAM135BQ49AJ0 1406 aa28.16■■■□□ 2.1
TMCO3-201ENST00000375391 CDK19Q9BWU1 502 aa28.15■■■□□ 2.1
TMCO3-201ENST00000375391 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.15■■■□□ 2.1
TMCO3-201ENST00000375391 CNGB1Q14028 1251 aaPredicted RBP28.15■■■□□ 2.1
TMCO3-201ENST00000375391 SRPK2P78362 688 aaKnown RBP28.14■■■□□ 2.1
TMCO3-201ENST00000375391 SIRT1Q96EB6 747 aa28.14■■■□□ 2.1
TMCO3-201ENST00000375391 EVC2Q86UK5 1308 aa28.13■■■□□ 2.09
TMCO3-201ENST00000375391 ZNF335Q9H4Z2 1342 aaPredicted RBP28.13■■■□□ 2.09
TMCO3-201ENST00000375391 PTCH1Q13635 1447 aa28.12■■■□□ 2.09
TMCO3-201ENST00000375391 STRCP1A6NGW2 1772 aa28.11■■■□□ 2.09
TMCO3-201ENST00000375391 SLC12A5Q9H2X9 1139 aa28.1■■■□□ 2.09
TMCO3-201ENST00000375391 AEBP2Q6ZN18 517 aaPredicted RBP28.1■■■□□ 2.09
TMCO3-201ENST00000375391 TMC1Q8TDI8 760 aa28.09■■■□□ 2.09
TMCO3-201ENST00000375391 WASLO00401 505 aaPredicted RBP28.08■■■□□ 2.09
TMCO3-201ENST00000375391 PANK3Q9H999 370 aa28.07■■■□□ 2.08
TMCO3-201ENST00000375391 PROSER2Q86WR7 435 aaPredicted RBP28.06■■■□□ 2.08
TMCO3-201ENST00000375391 CDCA8Q53HL2 280 aa28.05■■■□□ 2.08
TMCO3-201ENST00000375391 MIER1Q8N108 512 aa28.04■■■□□ 2.08
TMCO3-201ENST00000375391 PRR36Q9H6K5 1346 aa28.03■■■□□ 2.08
TMCO3-201ENST00000375391 C14orf37Q86TY3 774 aa28.02■■■□□ 2.08
TMCO3-201ENST00000375391 NWD1Q149M9 1564 aa28.01■■■□□ 2.07
TMCO3-201ENST00000375391 MYOM1P52179 1685 aa28.01■■■□□ 2.07
TMCO3-201ENST00000375391 SLC24A1O60721 1099 aa28■■■□□ 2.07
TMCO3-201ENST00000375391 CABP1Q9NZU7 370 aa28■■■□□ 2.07
TMCO3-201ENST00000375391 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
TMCO3-201ENST00000375391 NUDT16Q96DE0 195 aaKnown RBP27.98■■■□□ 2.07
TMCO3-201ENST00000375391 CARD14Q9BXL6 1004 aa27.97■■■□□ 2.07
TMCO3-201ENST00000375391 PER1O15534 1290 aaPredicted RBP27.97■■■□□ 2.07
TMCO3-201ENST00000375391 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
TMCO3-201ENST00000375391 DMRT2Q9Y5R5 561 aa27.94■■■□□ 2.06
TMCO3-201ENST00000375391 ADGRB2O60241 1585 aa27.92■■■□□ 2.06
TMCO3-201ENST00000375391 NKTRP30414 1462 aaKnown RBP27.91■■■□□ 2.06
TMCO3-201ENST00000375391 ATP7BP35670 1465 aa27.91■■■□□ 2.06
TMCO3-201ENST00000375391 ADGRL3Q9HAR2 1447 aa27.91■■■□□ 2.06
TMCO3-201ENST00000375391 ATAD2Q6PL18 1390 aa27.9■■■□□ 2.06
TMCO3-201ENST00000375391 PMFBP1Q8TBY8 1022 aa27.9■■■□□ 2.06
TMCO3-201ENST00000375391 PUS7Q96PZ0 661 aaKnown RBP27.89■■■□□ 2.06
TMCO3-201ENST00000375391 CCDC61Q9Y6R9 512 aa27.89■■■□□ 2.06
TMCO3-201ENST00000375391 PPIP5K1Q6PFW1 1433 aa27.89■■■□□ 2.06
TMCO3-201ENST00000375391 CD163L1Q9NR16 1453 aa27.88■■■□□ 2.05
TMCO3-201ENST00000375391 RGPD8O14715 1765 aaPredicted RBP27.88■■■□□ 2.05
TMCO3-201ENST00000375391 CC2D1BQ5T0F9 858 aaKnown RBP27.88■■■□□ 2.05
TMCO3-201ENST00000375391 USP32Q8NFA0 1604 aa27.87■■■□□ 2.05
TMCO3-201ENST00000375391 A0A1W2PP64 1363 aa27.87■■■□□ 2.05
TMCO3-201ENST00000375391 LRRC7Q96NW7 1537 aa27.87■■■□□ 2.05
TMCO3-201ENST00000375391 C19orf44Q9H6X5 657 aa27.85■■■□□ 2.05
TMCO3-201ENST00000375391 XIRP1Q702N8 1843 aaKnown RBP27.84■■■□□ 2.05
TMCO3-201ENST00000375391 ANP32CO43423 234 aa27.83■■■□□ 2.05
TMCO3-201ENST00000375391 ORAI2Q96SN7 254 aa27.82■■■□□ 2.04
TMCO3-201ENST00000375391 KNSTRNQ9Y448 316 aa27.82■■■□□ 2.04
TMCO3-201ENST00000375391 NSD3Q9BZ95 1437 aa27.82■■■□□ 2.04
TMCO3-201ENST00000375391 ANKRD36BQ8N2N9 1353 aa27.81■■■□□ 2.04
TMCO3-201ENST00000375391 AMER1Q5JTC6 1135 aaPredicted RBP27.81■■■□□ 2.04
TMCO3-201ENST00000375391 PRKRIP1Q9H875 184 aaPredicted RBP27.8■■■□□ 2.04
TMCO3-201ENST00000375391 CDC42BPGQ6DT37 1551 aa27.8■■■□□ 2.04
TMCO3-201ENST00000375391 ACEP12821 1306 aa27.79■■■□□ 2.04
TMCO3-201ENST00000375391 FMN2Q9NZ56 1722 aa27.79■■■□□ 2.04
TMCO3-201ENST00000375391 ESCO1Q5FWF5 840 aa27.79■■■□□ 2.04
TMCO3-201ENST00000375391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.78■■■□□ 2.041e-6■■□□□ 13.1
TMCO3-201ENST00000375391 ATF3P18847 181 aa27.76■■■□□ 2.03
TMCO3-201ENST00000375391 TERF2IPQ9NYB0 399 aa27.76■■■□□ 2.03
TMCO3-201ENST00000375391 CCDC184Q52MB2 194 aa27.75■■■□□ 2.03
TMCO3-201ENST00000375391 PLEKHG3A1L390 1219 aa27.74■■■□□ 2.03
TMCO3-201ENST00000375391 HDGFL2Q7Z4V5 671 aaPredicted RBP27.74■■■□□ 2.03
TMCO3-201ENST00000375391 NINLQ9Y2I6 1382 aa27.74■■■□□ 2.03
TMCO3-201ENST00000375391 CPSF1Q10570 1443 aaKnown RBP27.74■■■□□ 2.03
TMCO3-201ENST00000375391 TOPAZ1Q8N9V7 1692 aa27.74■■■□□ 2.03
TMCO3-201ENST00000375391 MSH6P52701 1360 aa27.73■■■□□ 2.03
TMCO3-201ENST00000375391 KTN1Q86UP2 1357 aaKnown RBP27.73■■■□□ 2.03
TMCO3-201ENST00000375391 DDX17Q92841 729 aaKnown RBP27.73■■■□□ 2.03
TMCO3-201ENST00000375391 NGDNQ8NEJ9 315 aaKnown RBP27.73■■■□□ 2.03
TMCO3-201ENST00000375391 LTBP4Q8N2S1 1624 aa27.72■■■□□ 2.03
TMCO3-201ENST00000375391 XPCQ01831 940 aaPredicted RBP27.72■■■□□ 2.03
TMCO3-201ENST00000375391 ZRANB1Q9UGI0 708 aa27.72■■■□□ 2.03
TMCO3-201ENST00000375391 GGNBP2Q9H3C7 697 aa27.71■■■□□ 2.03
TMCO3-201ENST00000375391 PHF8Q9UPP1 1060 aa27.71■■■□□ 2.03
TMCO3-201ENST00000375391 ANKARQ7Z5J8 1434 aa27.71■■■□□ 2.03
TMCO3-201ENST00000375391 FOXO3O43524 673 aa27.7■■■□□ 2.03
TMCO3-201ENST00000375391 MST1RQ04912 1400 aa27.7■■■□□ 2.03
TMCO3-201ENST00000375391 C1orf167Q5SNV9 1468 aa27.7■■■□□ 2.02
TMCO3-201ENST00000375391 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
TMCO3-201ENST00000375391 NCOA3Q9Y6Q9 1424 aa27.69■■■□□ 2.02
TMCO3-201ENST00000375391 CADPS2Q86UW7 1296 aa27.68■■■□□ 2.02
TMCO3-201ENST00000375391 FYB1O15117 783 aa27.68■■■□□ 2.02
TMCO3-201ENST00000375391 NME9Q86XW9 330 aa27.68■■■□□ 2.02
TMCO3-201ENST00000375391 FBLN1P23142 703 aa27.66■■■□□ 2.02
TMCO3-201ENST00000375391 CGNL1Q0VF96 1302 aa27.64■■■□□ 2.02
TMCO3-201ENST00000375391 POLR3AO14802 1390 aaPredicted RBP27.64■■■□□ 2.02
TMCO3-201ENST00000375391 PARD3Q8TEW0 1356 aa27.63■■■□□ 2.01
TMCO3-201ENST00000375391 USP6P35125 1406 aa27.63■■■□□ 2.01
TMCO3-201ENST00000375391 SLAIN2Q9P270 581 aa27.63■■■□□ 2.01
TMCO3-201ENST00000375391 ZNF692Q9BU19 519 aaPredicted RBP27.62■■■□□ 2.01
TMCO3-201ENST00000375391 DCCP43146 1447 aa27.62■■■□□ 2.01
TMCO3-201ENST00000375391 ITSN1Q15811 1721 aa27.62■■■□□ 2.01
TMCO3-201ENST00000375391 NUTM2GQ5VZR2 741 aa27.61■■■□□ 2.01
TMCO3-201ENST00000375391 TTC21BQ7Z4L5 1316 aa27.61■■■□□ 2.01
TMCO3-201ENST00000375391 AKAP12Q02952 1782 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms