RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NGLY1Q96IV0 654 aa16.04■□□□□ 0.16
HLA-DQA1-202ENST00000374949 VGFO15240 615 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQA1-202ENST00000374949 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
HLA-DQA1-202ENST00000374949 ACIN1Q9UKV3 1341 aaKnown RBP16.01■□□□□ 0.15
HLA-DQA1-202ENST00000374949 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQA1-202ENST00000374949 MYOM2P54296 1465 aa16.01■□□□□ 0.15
HLA-DQA1-202ENST00000374949 PXDNQ92626 1479 aa16■□□□□ 0.15
HLA-DQA1-202ENST00000374949 USP21Q9UK80 565 aa16■□□□□ 0.15
HLA-DQA1-202ENST00000374949 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
HLA-DQA1-202ENST00000374949 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
HLA-DQA1-202ENST00000374949 ATRNO75882 1429 aa15.99■□□□□ 0.15
HLA-DQA1-202ENST00000374949 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
HLA-DQA1-202ENST00000374949 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
HLA-DQA1-202ENST00000374949 KNDC1Q76NI1 1749 aa15.97■□□□□ 0.15
HLA-DQA1-202ENST00000374949 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQA1-202ENST00000374949 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQA1-202ENST00000374949 ESCO1Q5FWF5 840 aa15.96■□□□□ 0.15
HLA-DQA1-202ENST00000374949 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
HLA-DQA1-202ENST00000374949 FMN2Q9NZ56 1722 aa15.96■□□□□ 0.15
HLA-DQA1-202ENST00000374949 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
HLA-DQA1-202ENST00000374949 FOXD1Q16676 465 aa15.95■□□□□ 0.14
HLA-DQA1-202ENST00000374949 FNBP4Q8N3X1 1017 aaPredicted RBP15.95■□□□□ 0.14
HLA-DQA1-202ENST00000374949 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
HLA-DQA1-202ENST00000374949 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
HLA-DQA1-202ENST00000374949 BCL9LQ86UU0 1499 aa15.94■□□□□ 0.14
HLA-DQA1-202ENST00000374949 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
HLA-DQA1-202ENST00000374949 TECPR2O15040 1411 aa15.94■□□□□ 0.14
HLA-DQA1-202ENST00000374949 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
HLA-DQA1-202ENST00000374949 NUTM2FA1L443 756 aa15.93■□□□□ 0.14
HLA-DQA1-202ENST00000374949 STK26Q9P289 416 aa15.93■□□□□ 0.14
HLA-DQA1-202ENST00000374949 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
HLA-DQA1-202ENST00000374949 PLEKHH1Q9ULM0 1364 aa15.92■□□□□ 0.14
HLA-DQA1-202ENST00000374949 FOXO3O43524 673 aa15.92■□□□□ 0.14
HLA-DQA1-202ENST00000374949 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
HLA-DQA1-202ENST00000374949 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
HLA-DQA1-202ENST00000374949 EP400Q96L91 3159 aa15.91■□□□□ 0.14
HLA-DQA1-202ENST00000374949 WAPLQ7Z5K2 1190 aa15.91■□□□□ 0.14
HLA-DQA1-202ENST00000374949 USP32Q8NFA0 1604 aa15.9■□□□□ 0.14
HLA-DQA1-202ENST00000374949 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
HLA-DQA1-202ENST00000374949 GLI3P10071 1580 aa15.9■□□□□ 0.14
HLA-DQA1-202ENST00000374949 RGL3Q3MIN7 710 aa15.89■□□□□ 0.13
HLA-DQA1-202ENST00000374949 RGPD8O14715 1765 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQA1-202ENST00000374949 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
HLA-DQA1-202ENST00000374949 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
HLA-DQA1-202ENST00000374949 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 BRWD3Q6RI45 1802 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 PLCH1Q4KWH8 1693 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 SLIT2O94813 1529 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
HLA-DQA1-202ENST00000374949 YTHDC2Q9H6S0 1430 aaKnown RBP15.86■□□□□ 0.13
HLA-DQA1-202ENST00000374949 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
HLA-DQA1-202ENST00000374949 MPHOSPH9Q99550 1183 aa15.84■□□□□ 0.13
HLA-DQA1-202ENST00000374949 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
HLA-DQA1-202ENST00000374949 SPATA31A3Q5VYP0 1347 aa15.84■□□□□ 0.13
HLA-DQA1-202ENST00000374949 TNS3Q68CZ2 1445 aa15.83■□□□□ 0.12
HLA-DQA1-202ENST00000374949 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
HLA-DQA1-202ENST00000374949 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
HLA-DQA1-202ENST00000374949 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
HLA-DQA1-202ENST00000374949 NRXN1Q9ULB1 1477 aa15.8■□□□□ 0.12
HLA-DQA1-202ENST00000374949 BLMP54132 1417 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQA1-202ENST00000374949 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
HLA-DQA1-202ENST00000374949 CCDC125Q86Z20 511 aa15.79■□□□□ 0.12
HLA-DQA1-202ENST00000374949 CABLES1Q8TDN4 633 aa15.79■□□□□ 0.12
HLA-DQA1-202ENST00000374949 HAP1P54257 671 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQA1-202ENST00000374949 PHF8Q9UPP1 1060 aa15.78■□□□□ 0.12
HLA-DQA1-202ENST00000374949 NRAPQ86VF7 1730 aa15.77■□□□□ 0.12
HLA-DQA1-202ENST00000374949 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.12
HLA-DQA1-202ENST00000374949 ADGRB2O60241 1585 aa15.77■□□□□ 0.11
HLA-DQA1-202ENST00000374949 TRPM3Q9HCF6 1732 aaPredicted RBP15.77■□□□□ 0.11
HLA-DQA1-202ENST00000374949 CFAP70Q5T0N1 1121 aa15.76■□□□□ 0.11
HLA-DQA1-202ENST00000374949 C14orf93Q9H972 538 aaKnown RBP15.76■□□□□ 0.11
HLA-DQA1-202ENST00000374949 DLC1Q96QB1 1528 aa15.75■□□□□ 0.11
HLA-DQA1-202ENST00000374949 DEFB132Q7Z7B7 95 aa15.75■□□□□ 0.11
HLA-DQA1-202ENST00000374949 SEPT12Q8IYM1 358 aa15.75■□□□□ 0.11
HLA-DQA1-202ENST00000374949 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
HLA-DQA1-202ENST00000374949 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
HLA-DQA1-202ENST00000374949 VPS72Q15906 364 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 LMOD2Q6P5Q4 547 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 SIN3AQ96ST3 1273 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 ADGRB1O14514 1584 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 ARHGEF10O15013 1369 aa15.74■□□□□ 0.11
HLA-DQA1-202ENST00000374949 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
HLA-DQA1-202ENST00000374949 PSME1Q06323 249 aa15.73■□□□□ 0.11
HLA-DQA1-202ENST00000374949 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
HLA-DQA1-202ENST00000374949 TIMELESSQ9UNS1 1208 aa15.72■□□□□ 0.11
HLA-DQA1-202ENST00000374949 CRYBG1Q9Y4K1 1723 aa15.71■□□□□ 0.11
HLA-DQA1-202ENST00000374949 PMFBP1Q8TBY8 1022 aa15.71■□□□□ 0.11
HLA-DQA1-202ENST00000374949 LRP5O75197 1615 aa15.71■□□□□ 0.11
HLA-DQA1-202ENST00000374949 COL14A1Q05707 1796 aaKnown RBP15.7■□□□□ 0.1
HLA-DQA1-202ENST00000374949 SF3B2Q13435 895 aaKnown RBP15.7■□□□□ 0.1
HLA-DQA1-202ENST00000374949 A0A0G2JS52 829 aa15.69■□□□□ 0.1
HLA-DQA1-202ENST00000374949 MYT1Q01538 1121 aa15.69■□□□□ 0.1
HLA-DQA1-202ENST00000374949 POGKQ9P215 609 aa15.69■□□□□ 0.1
HLA-DQA1-202ENST00000374949 TULP4Q9NRJ4 1543 aa15.68■□□□□ 0.1
HLA-DQA1-202ENST00000374949 FAM83GA6ND36 823 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms