RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 POGKQ9P215 609 aa23.97■■□□□ 1.43
HLA-DMA-201ENST00000374843 MYOM1P52179 1685 aa23.96■■□□□ 1.43
HLA-DMA-201ENST00000374843 PUS7Q96PZ0 661 aaKnown RBP23.95■■□□□ 1.42
HLA-DMA-201ENST00000374843 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.94■■□□□ 1.42
HLA-DMA-201ENST00000374843 EVC2Q86UK5 1308 aa23.93■■□□□ 1.42
HLA-DMA-201ENST00000374843 WAPLQ7Z5K2 1190 aa23.93■■□□□ 1.42
HLA-DMA-201ENST00000374843 KCNA6P17658 529 aa23.92■■□□□ 1.42
HLA-DMA-201ENST00000374843 DIEXFQ68CQ4 756 aaKnown RBP23.91■■□□□ 1.42
HLA-DMA-201ENST00000374843 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
HLA-DMA-201ENST00000374843 MINK1Q8N4C8 1332 aaPredicted RBP23.89■■□□□ 1.42
HLA-DMA-201ENST00000374843 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.41
HLA-DMA-201ENST00000374843 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
HLA-DMA-201ENST00000374843 NALCNQ8IZF0 1738 aa23.87■■□□□ 1.41
HLA-DMA-201ENST00000374843 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
HLA-DMA-201ENST00000374843 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
HLA-DMA-201ENST00000374843 NINLQ9Y2I6 1382 aa23.85■■□□□ 1.41
HLA-DMA-201ENST00000374843 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
HLA-DMA-201ENST00000374843 POLR3GLQ9BT43 218 aa23.83■■□□□ 1.41
HLA-DMA-201ENST00000374843 WASLO00401 505 aaPredicted RBP23.82■■□□□ 1.4
HLA-DMA-201ENST00000374843 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
HLA-DMA-201ENST00000374843 NCOA3Q9Y6Q9 1424 aa23.82■■□□□ 1.4
HLA-DMA-201ENST00000374843 ATP7BP35670 1465 aa23.81■■□□□ 1.4
HLA-DMA-201ENST00000374843 TOPAZ1Q8N9V7 1692 aa23.81■■□□□ 1.4
HLA-DMA-201ENST00000374843 CDK19Q9BWU1 502 aa23.8■■□□□ 1.4
HLA-DMA-201ENST00000374843 FMN2Q9NZ56 1722 aa23.8■■□□□ 1.4
HLA-DMA-201ENST00000374843 CABP2Q9NPB3 220 aa23.78■■□□□ 1.4
HLA-DMA-201ENST00000374843 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
HLA-DMA-201ENST00000374843 ANKARQ7Z5J8 1434 aa23.77■■□□□ 1.4
HLA-DMA-201ENST00000374843 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
HLA-DMA-201ENST00000374843 ITSN1Q15811 1721 aa23.74■■□□□ 1.39
HLA-DMA-201ENST00000374843 ANKRD36BQ8N2N9 1353 aa23.74■■□□□ 1.39
HLA-DMA-201ENST00000374843 DCCP43146 1447 aa23.74■■□□□ 1.39
HLA-DMA-201ENST00000374843 CD163L1Q9NR16 1453 aa23.73■■□□□ 1.39
HLA-DMA-201ENST00000374843 PANK3Q9H999 370 aa23.72■■□□□ 1.39
HLA-DMA-201ENST00000374843 PRR36Q9H6K5 1346 aa23.72■■□□□ 1.39
HLA-DMA-201ENST00000374843 TMEM94Q12767 1356 aa23.72■■□□□ 1.39
HLA-DMA-201ENST00000374843 LRRC7Q96NW7 1537 aa23.72■■□□□ 1.39
HLA-DMA-201ENST00000374843 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
HLA-DMA-201ENST00000374843 XIRP1Q702N8 1843 aaKnown RBP23.7■■□□□ 1.39
HLA-DMA-201ENST00000374843 ZNF335Q9H4Z2 1342 aaPredicted RBP23.7■■□□□ 1.38
HLA-DMA-201ENST00000374843 PER1O15534 1290 aaPredicted RBP23.7■■□□□ 1.38
HLA-DMA-201ENST00000374843 PPIP5K1Q6PFW1 1433 aa23.69■■□□□ 1.38
HLA-DMA-201ENST00000374843 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
HLA-DMA-201ENST00000374843 SLC12A5Q9H2X9 1139 aa23.68■■□□□ 1.38
HLA-DMA-201ENST00000374843 A0A1W2PP64 1363 aa23.67■■□□□ 1.38
HLA-DMA-201ENST00000374843 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
HLA-DMA-201ENST00000374843 CCDC61Q9Y6R9 512 aa23.67■■□□□ 1.38
HLA-DMA-201ENST00000374843 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
HLA-DMA-201ENST00000374843 TMC1Q8TDI8 760 aa23.66■■□□□ 1.38
HLA-DMA-201ENST00000374843 AKAP12Q02952 1782 aa23.65■■□□□ 1.38
HLA-DMA-201ENST00000374843 MON2Q7Z3U7 1717 aa23.65■■□□□ 1.38
HLA-DMA-201ENST00000374843 LTBP4Q8N2S1 1624 aa23.64■■□□□ 1.38
HLA-DMA-201ENST00000374843 RBM33Q96EV2 1170 aaKnown RBP23.63■■□□□ 1.37
HLA-DMA-201ENST00000374843 NSD3Q9BZ95 1437 aa23.63■■□□□ 1.37
HLA-DMA-201ENST00000374843 C19orf44Q9H6X5 657 aa23.63■■□□□ 1.37
HLA-DMA-201ENST00000374843 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
HLA-DMA-201ENST00000374843 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
HLA-DMA-201ENST00000374843 NRKQ7Z2Y5 1582 aa23.62■■□□□ 1.37
HLA-DMA-201ENST00000374843 PLEKHG3A1L390 1219 aa23.62■■□□□ 1.37
HLA-DMA-201ENST00000374843 ANP32CO43423 234 aa23.62■■□□□ 1.37
HLA-DMA-201ENST00000374843 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
HLA-DMA-201ENST00000374843 CABP1Q9NZU7 370 aa23.62■■□□□ 1.37
HLA-DMA-201ENST00000374843 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
HLA-DMA-201ENST00000374843 RGPD8O14715 1765 aaPredicted RBP23.6■■□□□ 1.37
HLA-DMA-201ENST00000374843 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
HLA-DMA-201ENST00000374843 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
HLA-DMA-201ENST00000374843 MIER1Q8N108 512 aa23.6■■□□□ 1.37
HLA-DMA-201ENST00000374843 POLR3AO14802 1390 aaPredicted RBP23.6■■□□□ 1.37
HLA-DMA-201ENST00000374843 MSH6P52701 1360 aa23.6■■□□□ 1.37
HLA-DMA-201ENST00000374843 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
HLA-DMA-201ENST00000374843 MST1RQ04912 1400 aa23.59■■□□□ 1.37
HLA-DMA-201ENST00000374843 PARD3Q8TEW0 1356 aa23.58■■□□□ 1.37
HLA-DMA-201ENST00000374843 HDGFL2Q7Z4V5 671 aaPredicted RBP23.58■■□□□ 1.37
HLA-DMA-201ENST00000374843 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
HLA-DMA-201ENST00000374843 EDC4Q6P2E9 1401 aaKnown RBP23.58■■□□□ 1.36
HLA-DMA-201ENST00000374843 NSD2O96028 1365 aa23.57■■□□□ 1.36
HLA-DMA-201ENST00000374843 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
HLA-DMA-201ENST00000374843 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
HLA-DMA-201ENST00000374843 USP6P35125 1406 aa23.54■■□□□ 1.36
HLA-DMA-201ENST00000374843 ANKRD26Q9UPS8 1709 aa23.53■■□□□ 1.36
HLA-DMA-201ENST00000374843 SSH2Q76I76 1423 aa23.53■■□□□ 1.36
HLA-DMA-201ENST00000374843 NUTM2FA1L443 756 aa23.53■■□□□ 1.36
HLA-DMA-201ENST00000374843 CADPS2Q86UW7 1296 aa23.53■■□□□ 1.36
HLA-DMA-201ENST00000374843 KIF20BQ96Q89 1820 aa23.53■■□□□ 1.36
HLA-DMA-201ENST00000374843 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
HLA-DMA-201ENST00000374843 ATF3P18847 181 aa23.52■■□□□ 1.36
HLA-DMA-201ENST00000374843 RALBP1Q15311 655 aa23.52■■□□□ 1.36
HLA-DMA-201ENST00000374843 ZNF692Q9BU19 519 aaPredicted RBP23.52■■□□□ 1.36
HLA-DMA-201ENST00000374843 ACEP12821 1306 aa23.52■■□□□ 1.36
HLA-DMA-201ENST00000374843 BRD4O60885 1362 aaPredicted RBP23.5■■□□□ 1.35
HLA-DMA-201ENST00000374843 CCER2I3L3R5 266 aa23.49■■□□□ 1.35
HLA-DMA-201ENST00000374843 PHF8Q9UPP1 1060 aa23.49■■□□□ 1.35
HLA-DMA-201ENST00000374843 CC2D1BQ5T0F9 858 aaKnown RBP23.46■■□□□ 1.35
HLA-DMA-201ENST00000374843 USP54Q70EL1 1684 aa23.45■■□□□ 1.34
HLA-DMA-201ENST00000374843 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
HLA-DMA-201ENST00000374843 PMFBP1Q8TBY8 1022 aa23.44■■□□□ 1.34
HLA-DMA-201ENST00000374843 ESCO1Q5FWF5 840 aa23.43■■□□□ 1.34
HLA-DMA-201ENST00000374843 NGDNQ8NEJ9 315 aaKnown RBP23.43■■□□□ 1.34
HLA-DMA-201ENST00000374843 TTC21BQ7Z4L5 1316 aa23.42■■□□□ 1.34
HLA-DMA-201ENST00000374843 TTC21AQ8NDW8 1320 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms