RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 KDM5AP29375 1690 aaKnown RBP22.17■■□□□ 1.14
RXRB-201ENST00000374680 MYOM1P52179 1685 aa22.16■■□□□ 1.14
RXRB-201ENST00000374680 POGKQ9P215 609 aa22.16■■□□□ 1.14
RXRB-201ENST00000374680 MYOM2P54296 1465 aa22.14■■□□□ 1.14
RXRB-201ENST00000374680 PPM1GO15355 546 aaPredicted RBP22.14■■□□□ 1.14
RXRB-201ENST00000374680 TRMT2AQ8IZ69 625 aaKnown RBP22.14■■□□□ 1.14
RXRB-201ENST00000374680 CGNL1Q0VF96 1302 aa22.14■■□□□ 1.14
RXRB-201ENST00000374680 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.14
RXRB-201ENST00000374680 IGHDP01880 384 aa22.14■■□□□ 1.13
RXRB-201ENST00000374680 MS4A1P11836 297 aa22.14■■□□□ 1.13
RXRB-201ENST00000374680 EVC2Q86UK5 1308 aa22.14■■□□□ 1.13
RXRB-201ENST00000374680 CENPQQ7L2Z9 268 aaPredicted RBP22.13■■□□□ 1.13
RXRB-201ENST00000374680 INSRP06213 1382 aa22.13■■□□□ 1.13
RXRB-201ENST00000374680 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
RXRB-201ENST00000374680 RUNDC1Q96C34 613 aa22.12■■□□□ 1.13
RXRB-201ENST00000374680 PRAM1Q96QH2 718 aa22.12■■□□□ 1.13
RXRB-201ENST00000374680 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
RXRB-201ENST00000374680 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
RXRB-201ENST00000374680 CFAP53Q96M91 514 aa22.11■■□□□ 1.13
RXRB-201ENST00000374680 YEATS2Q9ULM3 1422 aa22.11■■□□□ 1.13
RXRB-201ENST00000374680 NKTRP30414 1462 aaKnown RBP22.1■■□□□ 1.13
RXRB-201ENST00000374680 TSR2Q969E8 191 aaKnown RBP22.09■■□□□ 1.13
RXRB-201ENST00000374680 FAM69CQ0P6D2 419 aa22.09■■□□□ 1.13
RXRB-201ENST00000374680 FRMPD1Q5SYB0 1578 aa22.09■■□□□ 1.13
RXRB-201ENST00000374680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.12
RXRB-201ENST00000374680 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
RXRB-201ENST00000374680 POLR3AO14802 1390 aaPredicted RBP22.06■■□□□ 1.12
RXRB-201ENST00000374680 RLBP1P12271 317 aa22.06■■□□□ 1.12
RXRB-201ENST00000374680 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
RXRB-201ENST00000374680 WAPLQ7Z5K2 1190 aa22.05■■□□□ 1.12
RXRB-201ENST00000374680 MLH3Q9UHC1 1453 aa22.05■■□□□ 1.12
RXRB-201ENST00000374680 NEFMP07197 916 aa22.04■■□□□ 1.12
RXRB-201ENST00000374680 ABCC3O15438 1527 aa22.03■■□□□ 1.12
RXRB-201ENST00000374680 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
RXRB-201ENST00000374680 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
RXRB-201ENST00000374680 CABP1Q9NZU7 370 aa22.03■■□□□ 1.12
RXRB-201ENST00000374680 DAXXQ9UER7 740 aaPredicted RBP22.03■■□□□ 1.12
RXRB-201ENST00000374680 SBNO2Q9Y2G9 1366 aa22.02■■□□□ 1.12
RXRB-201ENST00000374680 FAM161AQ3B820 660 aa22.01■■□□□ 1.11
RXRB-201ENST00000374680 C8orf34Q49A92 452 aa22.01■■□□□ 1.11
RXRB-201ENST00000374680 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
RXRB-201ENST00000374680 KIAA1210Q9ULL0 1709 aa22.01■■□□□ 1.11
RXRB-201ENST00000374680 ADGRB1O14514 1584 aa21.99■■□□□ 1.11
RXRB-201ENST00000374680 HECW2Q9P2P5 1572 aa21.99■■□□□ 1.11
RXRB-201ENST00000374680 CDK19Q9BWU1 502 aa21.99■■□□□ 1.11
RXRB-201ENST00000374680 LMTK2Q8IWU2 1503 aa21.99■■□□□ 1.11
RXRB-201ENST00000374680 FYB1O15117 783 aa21.99■■□□□ 1.11
RXRB-201ENST00000374680 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
RXRB-201ENST00000374680 A0A1W2PP64 1363 aa21.98■■□□□ 1.11
RXRB-201ENST00000374680 PCDHB15Q9Y5E8 787 aa21.97■■□□□ 1.11
RXRB-201ENST00000374680 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
RXRB-201ENST00000374680 EXOSC9Q06265 439 aaKnown RBP21.96■■□□□ 1.11
RXRB-201ENST00000374680 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
RXRB-201ENST00000374680 SIGLEC1Q9BZZ2 1709 aa21.95■■□□□ 1.1
RXRB-201ENST00000374680 IFT172Q9UG01 1749 aa21.95■■□□□ 1.1
RXRB-201ENST00000374680 SEC24BO95487 1268 aa21.94■■□□□ 1.1
RXRB-201ENST00000374680 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
RXRB-201ENST00000374680 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
RXRB-201ENST00000374680 TERF2IPQ9NYB0 399 aa21.93■■□□□ 1.1
RXRB-201ENST00000374680 NCKAP5LQ9HCH0 1330 aa21.93■■□□□ 1.1
RXRB-201ENST00000374680 NUTM2FA1L443 756 aa21.93■■□□□ 1.1
RXRB-201ENST00000374680 HMOX1P09601 288 aa21.93■■□□□ 1.1
RXRB-201ENST00000374680 PPLO60437 1756 aa21.92■■□□□ 1.1
RXRB-201ENST00000374680 RIPK4P57078 832 aa21.92■■□□□ 1.1
RXRB-201ENST00000374680 FTSJ3Q8IY81 847 aaKnown RBP21.92■■□□□ 1.1
RXRB-201ENST00000374680 SMC4Q9NTJ3 1288 aa21.92■■□□□ 1.1
RXRB-201ENST00000374680 TULP4Q9NRJ4 1543 aa21.92■■□□□ 1.1
RXRB-201ENST00000374680 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
RXRB-201ENST00000374680 GLI2P10070 1586 aa21.91■■□□□ 1.1
RXRB-201ENST00000374680 TMPOP42166 694 aaKnown RBP21.91■■□□□ 1.1
RXRB-201ENST00000374680 ZRANB1Q9UGI0 708 aa21.91■■□□□ 1.1
RXRB-201ENST00000374680 MYH16Q9H6N6 1097 aa21.9■■□□□ 1.1
RXRB-201ENST00000374680 HDGFL2Q7Z4V5 671 aaPredicted RBP21.9■■□□□ 1.1
RXRB-201ENST00000374680 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
RXRB-201ENST00000374680 ELL2O00472 640 aaPredicted RBP21.89■■□□□ 1.09
RXRB-201ENST00000374680 NGEFQ8N5V2 710 aa21.89■■□□□ 1.09
RXRB-201ENST00000374680 DDRGK1Q96HY6 314 aa21.89■■□□□ 1.09
RXRB-201ENST00000374680 SETBP1Q9Y6X0 1596 aa21.89■■□□□ 1.09
RXRB-201ENST00000374680 TXNDC2Q86VQ3 553 aa21.88■■□□□ 1.09
RXRB-201ENST00000374680 NEURL4Q96JN8 1562 aa21.88■■□□□ 1.09
RXRB-201ENST00000374680 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
RXRB-201ENST00000374680 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
RXRB-201ENST00000374680 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
RXRB-201ENST00000374680 TRIM35Q9UPQ4 493 aa21.87■■□□□ 1.09
RXRB-201ENST00000374680 DIP2CQ9Y2E4 1556 aa21.87■■□□□ 1.09
RXRB-201ENST00000374680 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
RXRB-201ENST00000374680 NEO1Q92859 1461 aa21.86■■□□□ 1.09
RXRB-201ENST00000374680 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
RXRB-201ENST00000374680 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
RXRB-201ENST00000374680 PDZRN3Q9UPQ7 1066 aa21.86■■□□□ 1.09
RXRB-201ENST00000374680 SOX12O15370 315 aa21.84■■□□□ 1.09
RXRB-201ENST00000374680 YTHDC2Q9H6S0 1430 aaKnown RBP21.84■■□□□ 1.09
RXRB-201ENST00000374680 ZKSCAN2Q63HK3 967 aa21.83■■□□□ 1.09
RXRB-201ENST00000374680 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
RXRB-201ENST00000374680 MYO3AQ8NEV4 1616 aa21.83■■□□□ 1.09
RXRB-201ENST00000374680 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
RXRB-201ENST00000374680 DZIP1LQ8IYY4 767 aaKnown RBP21.83■■□□□ 1.09
RXRB-201ENST00000374680 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
RXRB-201ENST00000374680 EMILIN1Q9Y6C2 1016 aa21.83■■□□□ 1.09
RXRB-201ENST00000374680 NOB1Q9ULX3 412 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms