RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ESCO1Q5FWF5 840 aa19.62■□□□□ 0.73
TRAPPC3-201ENST00000373159 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC3-201ENST00000373159 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
TRAPPC3-201ENST00000373159 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
TRAPPC3-201ENST00000373159 ANKRD30BQ9BXX2 1392 aa19.58■□□□□ 0.73
TRAPPC3-201ENST00000373159 FOXO3O43524 673 aa19.58■□□□□ 0.72
TRAPPC3-201ENST00000373159 MPHOSPH9Q99550 1183 aa19.58■□□□□ 0.72
TRAPPC3-201ENST00000373159 CCDC144AA2RUR9 1427 aa19.58■□□□□ 0.72
TRAPPC3-201ENST00000373159 WAPLQ7Z5K2 1190 aa19.57■□□□□ 0.72
TRAPPC3-201ENST00000373159 STK26Q9P289 416 aa19.57■□□□□ 0.72
TRAPPC3-201ENST00000373159 PPLO60437 1756 aa19.57■□□□□ 0.72
TRAPPC3-201ENST00000373159 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-201ENST00000373159 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
TRAPPC3-201ENST00000373159 TECPR2O15040 1411 aa19.56■□□□□ 0.72
TRAPPC3-201ENST00000373159 SPATA31E1Q6ZUB1 1445 aa19.56■□□□□ 0.72
TRAPPC3-201ENST00000373159 MYOM2P54296 1465 aa19.54■□□□□ 0.72
TRAPPC3-201ENST00000373159 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
TRAPPC3-201ENST00000373159 TMEM132EQ6IEE7 984 aa19.54■□□□□ 0.72
TRAPPC3-201ENST00000373159 ATAD2Q6PL18 1390 aa19.54■□□□□ 0.72
TRAPPC3-201ENST00000373159 ATRNO75882 1429 aa19.53■□□□□ 0.72
TRAPPC3-201ENST00000373159 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-201ENST00000373159 SIRT1Q96EB6 747 aa19.53■□□□□ 0.72
TRAPPC3-201ENST00000373159 PXDNQ92626 1479 aa19.53■□□□□ 0.72
TRAPPC3-201ENST00000373159 COL22A1Q8NFW1 1626 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC3-201ENST00000373159 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
TRAPPC3-201ENST00000373159 BCL9LQ86UU0 1499 aa19.51■□□□□ 0.71
TRAPPC3-201ENST00000373159 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
TRAPPC3-201ENST00000373159 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-201ENST00000373159 GJD4Q96KN9 370 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC3-201ENST00000373159 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
TRAPPC3-201ENST00000373159 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
TRAPPC3-201ENST00000373159 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
TRAPPC3-201ENST00000373159 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
TRAPPC3-201ENST00000373159 YTHDC2Q9H6S0 1430 aaKnown RBP19.47■□□□□ 0.71
TRAPPC3-201ENST00000373159 KRT28Q7Z3Y7 464 aa19.46■□□□□ 0.71
TRAPPC3-201ENST00000373159 SRCAPQ6ZRS2 3230 aa19.46■□□□□ 0.71
TRAPPC3-201ENST00000373159 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
TRAPPC3-201ENST00000373159 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
TRAPPC3-201ENST00000373159 PSME1Q06323 249 aa19.42■□□□□ 0.7
TRAPPC3-201ENST00000373159 CFAP70Q5T0N1 1121 aa19.42■□□□□ 0.7
TRAPPC3-201ENST00000373159 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
TRAPPC3-201ENST00000373159 ZRANB1Q9UGI0 708 aa19.41■□□□□ 0.7
TRAPPC3-201ENST00000373159 SLIT2O94813 1529 aa19.41■□□□□ 0.7
TRAPPC3-201ENST00000373159 IFT172Q9UG01 1749 aa19.39■□□□□ 0.7
TRAPPC3-201ENST00000373159 NRXN1Q9ULB1 1477 aa19.39■□□□□ 0.69
TRAPPC3-201ENST00000373159 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.69
TRAPPC3-201ENST00000373159 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
TRAPPC3-201ENST00000373159 EP400Q96L91 3159 aa19.38■□□□□ 0.69
TRAPPC3-201ENST00000373159 FMN2Q9NZ56 1722 aa19.37■□□□□ 0.69
TRAPPC3-201ENST00000373159 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
TRAPPC3-201ENST00000373159 SBNO1A3KN83 1393 aa19.36■□□□□ 0.69
TRAPPC3-201ENST00000373159 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-201ENST00000373159 KIF1AQ12756 1690 aa19.36■□□□□ 0.69
TRAPPC3-201ENST00000373159 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
TRAPPC3-201ENST00000373159 MARF1Q9Y4F3 1742 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-201ENST00000373159 SAFB2Q14151 953 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAPPC3-201ENST00000373159 VPS72Q15906 364 aa19.35■□□□□ 0.69
TRAPPC3-201ENST00000373159 CABLES1Q8TDN4 633 aa19.35■□□□□ 0.69
TRAPPC3-201ENST00000373159 ONECUT3O60422 494 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC3-201ENST00000373159 POGKQ9P215 609 aa19.34■□□□□ 0.69
TRAPPC3-201ENST00000373159 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
TRAPPC3-201ENST00000373159 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-201ENST00000373159 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
TRAPPC3-201ENST00000373159 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
TRAPPC3-201ENST00000373159 GLI3P10071 1580 aa19.32■□□□□ 0.68
TRAPPC3-201ENST00000373159 FAM83GA6ND36 823 aa19.31■□□□□ 0.68
TRAPPC3-201ENST00000373159 PMFBP1Q8TBY8 1022 aa19.31■□□□□ 0.68
TRAPPC3-201ENST00000373159 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC3-201ENST00000373159 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
TRAPPC3-201ENST00000373159 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
TRAPPC3-201ENST00000373159 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
TRAPPC3-201ENST00000373159 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
TRAPPC3-201ENST00000373159 STAC3Q96MF2 364 aa19.28■□□□□ 0.68
TRAPPC3-201ENST00000373159 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
TRAPPC3-201ENST00000373159 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-201ENST00000373159 RAB3GAP2Q9H2M9 1393 aa19.27■□□□□ 0.68
TRAPPC3-201ENST00000373159 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
TRAPPC3-201ENST00000373159 RGPD8O14715 1765 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-201ENST00000373159 SF3B2Q13435 895 aaKnown RBP19.25■□□□□ 0.67
TRAPPC3-201ENST00000373159 DEFB132Q7Z7B7 95 aa19.25■□□□□ 0.67
TRAPPC3-201ENST00000373159 HIRIP3Q9BW71 556 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-201ENST00000373159 ADGRB1O14514 1584 aa19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 GPRASP1Q5JY77 1395 aa19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 WASLO00401 505 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 KDM2AQ9Y2K7 1162 aa19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 PRR36Q9H6K5 1346 aa19.24■□□□□ 0.67
TRAPPC3-201ENST00000373159 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
TRAPPC3-201ENST00000373159 BTG4Q9NY30 223 aa19.22■□□□□ 0.67
TRAPPC3-201ENST00000373159 ADGRB2O60241 1585 aa19.21■□□□□ 0.67
TRAPPC3-201ENST00000373159 NWD2Q9ULI1 1742 aa19.2■□□□□ 0.66
TRAPPC3-201ENST00000373159 HRCP23327 699 aa19.2■□□□□ 0.66
TRAPPC3-201ENST00000373159 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-201ENST00000373159 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-201ENST00000373159 BRWD3Q6RI45 1802 aa19.18■□□□□ 0.66
TRAPPC3-201ENST00000373159 A0A0G2JS52 829 aa19.17■□□□□ 0.66
TRAPPC3-201ENST00000373159 MYT1Q01538 1121 aa19.17■□□□□ 0.66
TRAPPC3-201ENST00000373159 PLCH1Q4KWH8 1693 aa19.17■□□□□ 0.66
TRAPPC3-201ENST00000373159 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms