RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 ARHGEF28Q8N1W1 1705 aaKnown RBP36.08■■■■□ 3.37
C9orf50-201ENST00000372478 SAFB2Q14151 953 aaKnown RBP eCLIP36.08■■■■□ 3.37
C9orf50-201ENST00000372478 CADPS2Q86UW7 1296 aa36.08■■■■□ 3.37
C9orf50-201ENST00000372478 DCCP43146 1447 aa36.06■■■■□ 3.36
C9orf50-201ENST00000372478 POGKQ9P215 609 aa36.06■■■■□ 3.36
C9orf50-201ENST00000372478 SLAIN2Q9P270 581 aa36.04■■■■□ 3.36
C9orf50-201ENST00000372478 ROCK2O75116 1388 aaKnown RBP36.04■■■■□ 3.36
C9orf50-201ENST00000372478 TIMELESSQ9UNS1 1208 aa36.01■■■■□ 3.35
C9orf50-201ENST00000372478 ROBO1Q9Y6N7 1651 aa35.99■■■■□ 3.35
C9orf50-201ENST00000372478 CDC42BPGQ6DT37 1551 aa35.99■■■■□ 3.35
C9orf50-201ENST00000372478 RALGAPBQ86X10 1494 aa35.98■■■■□ 3.35
C9orf50-201ENST00000372478 MST1RQ04912 1400 aa35.97■■■■□ 3.35
C9orf50-201ENST00000372478 GPRASP1Q5JY77 1395 aa35.93■■■■□ 3.34
C9orf50-201ENST00000372478 MINK1Q8N4C8 1332 aaPredicted RBP35.93■■■■□ 3.34
C9orf50-201ENST00000372478 HIRIP3Q9BW71 556 aaPredicted RBP35.91■■■■□ 3.34
C9orf50-201ENST00000372478 FMN2Q9NZ56 1722 aa35.9■■■■□ 3.34
C9orf50-201ENST00000372478 CARD11Q9BXL7 1154 aa35.89■■■■□ 3.34
C9orf50-201ENST00000372478 NUTM2FA1L443 756 aa35.88■■■■□ 3.33
C9orf50-201ENST00000372478 ADGRB2O60241 1585 aa35.88■■■■□ 3.33
C9orf50-201ENST00000372478 C1orf167Q5SNV9 1468 aa35.88■■■■□ 3.33
C9orf50-201ENST00000372478 HSPA1LP34931 641 aa35.87■■■■□ 3.33
C9orf50-201ENST00000372478 CENPJQ9HC77 1338 aaPredicted RBP35.85■■■■□ 3.33
C9orf50-201ENST00000372478 QRICH2Q9H0J4 1663 aa35.85■■■■□ 3.33
C9orf50-201ENST00000372478 BRINP3Q76B58 766 aa35.84■■■■□ 3.33
C9orf50-201ENST00000372478 RGPD8O14715 1765 aaPredicted RBP35.81■■■■□ 3.32
C9orf50-201ENST00000372478 ORAI2Q96SN7 254 aa35.8■■■■□ 3.32
C9orf50-201ENST00000372478 EIF3AQ14152 1382 aaKnown RBP35.79■■■■□ 3.32
C9orf50-201ENST00000372478 PHLPP1O60346 1717 aa35.76■■■■□ 3.32
C9orf50-201ENST00000372478 WASLO00401 505 aaPredicted RBP35.76■■■■□ 3.32
C9orf50-201ENST00000372478 ESCO1Q5FWF5 840 aa35.75■■■■□ 3.31
C9orf50-201ENST00000372478 USP32Q8NFA0 1604 aa35.74■■■■□ 3.31
C9orf50-201ENST00000372478 ZEB1P37275 1124 aaPredicted RBP35.74■■■■□ 3.31
C9orf50-201ENST00000372478 NHSL1Q5SYE7 1610 aa35.72■■■■□ 3.31
C9orf50-201ENST00000372478 AHDC1Q5TGY3 1603 aaPredicted RBP35.72■■■■□ 3.31
C9orf50-201ENST00000372478 DDX17Q92841 729 aaKnown RBP35.71■■■■□ 3.31
C9orf50-201ENST00000372478 TULP4Q9NRJ4 1543 aa35.71■■■■□ 3.31
C9orf50-201ENST00000372478 CDK19Q9BWU1 502 aa35.69■■■■□ 3.3
C9orf50-201ENST00000372478 ANKARQ7Z5J8 1434 aa35.68■■■■□ 3.3
C9orf50-201ENST00000372478 PRR36Q9H6K5 1346 aa35.68■■■■□ 3.3
C9orf50-201ENST00000372478 COL16A1Q07092 1604 aaPredicted RBP35.67■■■■□ 3.3
C9orf50-201ENST00000372478 KIF1AQ12756 1690 aa35.63■■■■□ 3.29
C9orf50-201ENST00000372478 USP47Q96K76 1375 aa35.63■■■■□ 3.29
C9orf50-201ENST00000372478 ATP7BP35670 1465 aa35.62■■■■□ 3.29
C9orf50-201ENST00000372478 PHF8Q9UPP1 1060 aa35.61■■■■□ 3.29
C9orf50-201ENST00000372478 SRPK2P78362 688 aaKnown RBP35.61■■■■□ 3.29
C9orf50-201ENST00000372478 NUDT16Q96DE0 195 aaKnown RBP35.61■■■■□ 3.29
C9orf50-201ENST00000372478 ST20-MTHFSA0A0A6YYL1 179 aa35.6■■■■□ 3.29
C9orf50-201ENST00000372478 FOXO3O43524 673 aa35.6■■■■□ 3.29
C9orf50-201ENST00000372478 ITSN1Q15811 1721 aa35.59■■■■□ 3.29
C9orf50-201ENST00000372478 CABP2Q9NPB3 220 aa35.59■■■■□ 3.29
C9orf50-201ENST00000372478 EVC2Q86UK5 1308 aa35.58■■■■□ 3.29
C9orf50-201ENST00000372478 PMFBP1Q8TBY8 1022 aa35.58■■■■□ 3.29
C9orf50-201ENST00000372478 SBNO2Q9Y2G9 1366 aa35.58■■■■□ 3.29
C9orf50-201ENST00000372478 TOPAZ1Q8N9V7 1692 aa35.55■■■■□ 3.28
C9orf50-201ENST00000372478 NPHP3Q7Z494 1330 aa35.55■■■■□ 3.28
C9orf50-201ENST00000372478 XPCQ01831 940 aaPredicted RBP35.55■■■■□ 3.28
C9orf50-201ENST00000372478 SOS2Q07890 1332 aaPredicted RBP35.52■■■■□ 3.28
C9orf50-201ENST00000372478 PXDNQ92626 1479 aa35.51■■■■□ 3.28
C9orf50-201ENST00000372478 TESK2Q96S53 571 aa35.51■■■■□ 3.28
C9orf50-201ENST00000372478 CCDC61Q9Y6R9 512 aa35.5■■■■□ 3.27
C9orf50-201ENST00000372478 JCADQ9P266 1359 aa35.48■■■■□ 3.27
C9orf50-201ENST00000372478 LRRC59Q96AG4 307 aaKnown RBP35.46■■■■□ 3.27
C9orf50-201ENST00000372478 KRT28Q7Z3Y7 464 aa35.46■■■■□ 3.27
C9orf50-201ENST00000372478 PPIP5K1Q6PFW1 1433 aa35.45■■■■□ 3.27
C9orf50-201ENST00000372478 NGDNQ8NEJ9 315 aaKnown RBP35.45■■■■□ 3.27
C9orf50-201ENST00000372478 SHPRHQ149N8 1683 aa35.45■■■■□ 3.26
C9orf50-201ENST00000372478 PSME1Q06323 249 aa35.44■■■■□ 3.26
C9orf50-201ENST00000372478 PLEKHG3A1L390 1219 aa35.4■■■■□ 3.26
C9orf50-201ENST00000372478 EIF4G2P78344 907 aaKnown RBP eCLIP35.39■■■■□ 3.26
C9orf50-201ENST00000372478 CABP1Q9NZU7 370 aa35.39■■■■□ 3.26
C9orf50-201ENST00000372478 ACEP12821 1306 aa35.39■■■■□ 3.26
C9orf50-201ENST00000372478 PNPLA6Q8IY17 1366 aa35.38■■■■□ 3.25
C9orf50-201ENST00000372478 ATAD2Q6PL18 1390 aa35.37■■■■□ 3.25
C9orf50-201ENST00000372478 DISP3Q9P2K9 1392 aa35.37■■■■□ 3.25
C9orf50-201ENST00000372478 HSPA5P11021 654 aaKnown RBP35.37■■■■□ 3.25
C9orf50-201ENST00000372478 POLR3AO14802 1390 aaPredicted RBP35.37■■■■□ 3.25
C9orf50-201ENST00000372478 TRPM3Q9HCF6 1732 aaPredicted RBP35.36■■■■□ 3.25
C9orf50-201ENST00000372478 SLC24A1O60721 1099 aa35.35■■■■□ 3.25
C9orf50-201ENST00000372478 MED1Q15648 1581 aaPredicted RBP35.34■■■■□ 3.25
C9orf50-201ENST00000372478 TMF1P82094 1093 aa35.34■■■■□ 3.25
C9orf50-201ENST00000372478 SPATA31A3Q5VYP0 1347 aa35.33■■■■□ 3.25
C9orf50-201ENST00000372478 SBNO1A3KN83 1393 aa35.32■■■■□ 3.24
C9orf50-201ENST00000372478 TNS3Q68CZ2 1445 aa35.31■■■■□ 3.24
C9orf50-201ENST00000372478 SPATA31A6Q5VVP1 1343 aa35.3■■■■□ 3.24
C9orf50-201ENST00000372478 COL22A1Q8NFW1 1626 aaPredicted RBP35.29■■■■□ 3.24
C9orf50-201ENST00000372478 NUTM2BA6NNL0 878 aaPredicted RBP35.28■■■■□ 3.24
C9orf50-201ENST00000372478 NUTM2EB1AL46 878 aaPredicted RBP35.28■■■■□ 3.24
C9orf50-201ENST00000372478 LMOD2Q6P5Q4 547 aa35.28■■■■□ 3.24
C9orf50-201ENST00000372478 NUTM2AQ8IVF1 878 aaPredicted RBP35.28■■■■□ 3.24
C9orf50-201ENST00000372478 PAK3O75914 559 aaPredicted RBP35.28■■■■□ 3.24
C9orf50-201ENST00000372478 TMC1Q8TDI8 760 aa35.28■■■■□ 3.24
C9orf50-201ENST00000372478 PUS7Q96PZ0 661 aaKnown RBP35.28■■■■□ 3.24
C9orf50-201ENST00000372478 LRP6O75581 1613 aa35.27■■■■□ 3.24
C9orf50-201ENST00000372478 ALS2Q96Q42 1657 aa35.26■■■■□ 3.24
C9orf50-201ENST00000372478 AKAP12Q02952 1782 aa35.26■■■■□ 3.23
C9orf50-201ENST00000372478 SLC12A5Q9H2X9 1139 aa35.24■■■■□ 3.23
C9orf50-201ENST00000372478 PLEKHG5O94827 1062 aa35.22■■■■□ 3.23
C9orf50-201ENST00000372478 USP6P35125 1406 aa35.21■■■■□ 3.23
C9orf50-201ENST00000372478 ARHGEF10O15013 1369 aa35.21■■■■□ 3.23
C9orf50-201ENST00000372478 CDCA8Q53HL2 280 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms