RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
TMEM254-201ENST00000372273 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
TMEM254-201ENST00000372273 HSPA1LP34931 641 aa13.56□□□□□ -0.24
TMEM254-201ENST00000372273 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
TMEM254-201ENST00000372273 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
TMEM254-201ENST00000372273 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
TMEM254-201ENST00000372273 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
TMEM254-201ENST00000372273 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
TMEM254-201ENST00000372273 NCOA3Q9Y6Q9 1424 aa13.53□□□□□ -0.24
TMEM254-201ENST00000372273 LAMC1P11047 1609 aa13.53□□□□□ -0.24
TMEM254-201ENST00000372273 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
TMEM254-201ENST00000372273 SIRT1Q96EB6 747 aa13.52□□□□□ -0.24
TMEM254-201ENST00000372273 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.25
TMEM254-201ENST00000372273 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
TMEM254-201ENST00000372273 MST1RQ04912 1400 aa13.51□□□□□ -0.25
TMEM254-201ENST00000372273 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
TMEM254-201ENST00000372273 CENPJQ9HC77 1338 aaPredicted RBP13.5□□□□□ -0.25
TMEM254-201ENST00000372273 TIMELESSQ9UNS1 1208 aa13.5□□□□□ -0.25
TMEM254-201ENST00000372273 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 FOXO3O43524 673 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 WASLO00401 505 aaPredicted RBP13.49□□□□□ -0.25
TMEM254-201ENST00000372273 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
TMEM254-201ENST00000372273 PRR36Q9H6K5 1346 aa13.48□□□□□ -0.25
TMEM254-201ENST00000372273 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
TMEM254-201ENST00000372273 DLC1Q96QB1 1528 aa13.48□□□□□ -0.25
TMEM254-201ENST00000372273 DCCP43146 1447 aa13.48□□□□□ -0.25
TMEM254-201ENST00000372273 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
TMEM254-201ENST00000372273 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
TMEM254-201ENST00000372273 ARHGEF28Q8N1W1 1705 aaKnown RBP13.46□□□□□ -0.25
TMEM254-201ENST00000372273 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.25
TMEM254-201ENST00000372273 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.26
TMEM254-201ENST00000372273 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
TMEM254-201ENST00000372273 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
TMEM254-201ENST00000372273 USP47Q96K76 1375 aa13.44□□□□□ -0.26
TMEM254-201ENST00000372273 TESK2Q96S53 571 aa13.43□□□□□ -0.26
TMEM254-201ENST00000372273 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
TMEM254-201ENST00000372273 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
TMEM254-201ENST00000372273 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
TMEM254-201ENST00000372273 CABP1Q9NZU7 370 aa13.41□□□□□ -0.26
TMEM254-201ENST00000372273 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
TMEM254-201ENST00000372273 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
TMEM254-201ENST00000372273 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
TMEM254-201ENST00000372273 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
TMEM254-201ENST00000372273 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 PSME1Q06323 249 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
TMEM254-201ENST00000372273 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 RGPD8O14715 1765 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-201ENST00000372273 ATP7BP35670 1465 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 FMN2Q9NZ56 1722 aa13.38□□□□□ -0.27
TMEM254-201ENST00000372273 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
TMEM254-201ENST00000372273 ADGRB2O60241 1585 aa13.37□□□□□ -0.27
TMEM254-201ENST00000372273 KRT28Q7Z3Y7 464 aa13.37□□□□□ -0.27
TMEM254-201ENST00000372273 ACEP12821 1306 aa13.37□□□□□ -0.27
TMEM254-201ENST00000372273 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-201ENST00000372273 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-201ENST00000372273 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-201ENST00000372273 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
TMEM254-201ENST00000372273 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
TMEM254-201ENST00000372273 SOS2Q07890 1332 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-201ENST00000372273 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
TMEM254-201ENST00000372273 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
TMEM254-201ENST00000372273 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM254-201ENST00000372273 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
TMEM254-201ENST00000372273 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
TMEM254-201ENST00000372273 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
TMEM254-201ENST00000372273 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
TMEM254-201ENST00000372273 LRRC59Q96AG4 307 aaKnown RBP13.35□□□□□ -0.27
TMEM254-201ENST00000372273 PPIP5K1Q6PFW1 1433 aa13.35□□□□□ -0.27
TMEM254-201ENST00000372273 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
TMEM254-201ENST00000372273 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
TMEM254-201ENST00000372273 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
TMEM254-201ENST00000372273 PXDNQ92626 1479 aa13.33□□□□□ -0.28
TMEM254-201ENST00000372273 PLEKHG3A1L390 1219 aa13.32□□□□□ -0.28
TMEM254-201ENST00000372273 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
TMEM254-201ENST00000372273 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
TMEM254-201ENST00000372273 TMF1P82094 1093 aa13.32□□□□□ -0.28
TMEM254-201ENST00000372273 JCADQ9P266 1359 aa13.31□□□□□ -0.28
TMEM254-201ENST00000372273 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
TMEM254-201ENST00000372273 SPATA31A3Q5VYP0 1347 aa13.3□□□□□ -0.28
TMEM254-201ENST00000372273 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
TMEM254-201ENST00000372273 NHSL1Q5SYE7 1610 aa13.29□□□□□ -0.28
TMEM254-201ENST00000372273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
TMEM254-201ENST00000372273 POLR3AO14802 1390 aaPredicted RBP13.29□□□□□ -0.28
TMEM254-201ENST00000372273 MIER1Q8N108 512 aa13.28□□□□□ -0.28
TMEM254-201ENST00000372273 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
TMEM254-201ENST00000372273 ATAD2Q6PL18 1390 aa13.28□□□□□ -0.28
TMEM254-201ENST00000372273 LRP6O75581 1613 aa13.27□□□□□ -0.28
TMEM254-201ENST00000372273 ABTB2Q8N961 1025 aa13.27□□□□□ -0.28
TMEM254-201ENST00000372273 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
TMEM254-201ENST00000372273 SOX12O15370 315 aa13.25□□□□□ -0.29
TMEM254-201ENST00000372273 CD163L1Q9NR16 1453 aa13.25□□□□□ -0.29
TMEM254-201ENST00000372273 TNS3Q68CZ2 1445 aa13.25□□□□□ -0.29
TMEM254-201ENST00000372273 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms