RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
SMARCA1-202ENST00000371122 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
SMARCA1-202ENST00000371122 RIPK4P57078 832 aa11.45□□□□□ -0.58
SMARCA1-202ENST00000371122 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
SMARCA1-202ENST00000371122 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
SMARCA1-202ENST00000371122 NPHP1O15259 732 aa11.44□□□□□ -0.58
SMARCA1-202ENST00000371122 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
SMARCA1-202ENST00000371122 EIF2AK4Q9P2K8 1649 aaKnown RBP11.44□□□□□ -0.58
SMARCA1-202ENST00000371122 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
SMARCA1-202ENST00000371122 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
SMARCA1-202ENST00000371122 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
SMARCA1-202ENST00000371122 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
SMARCA1-202ENST00000371122 ADGRL1O94910 1474 aa11.43□□□□□ -0.58
SMARCA1-202ENST00000371122 DEPDC5O75140 1603 aa11.43□□□□□ -0.58
SMARCA1-202ENST00000371122 GCC2Q8IWJ2 1684 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 PMFBP1Q8TBY8 1022 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 STK31Q9BXU1 1019 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 CNTLNQ9NXG0 1405 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 RILPL2Q969X0 211 aa11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 ANO8Q9HCE9 1232 aaPredicted RBP11.42□□□□□ -0.58
SMARCA1-202ENST00000371122 E9PSI1 815 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 EIF3AQ14152 1382 aaKnown RBP11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 RAPGEF3O95398 923 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 HDGFP51858 240 aaKnown RBP11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 ZKSCAN2Q63HK3 967 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 CENPQQ7L2Z9 268 aaPredicted RBP11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 AGLP35573 1532 aa11.41□□□□□ -0.58
SMARCA1-202ENST00000371122 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
SMARCA1-202ENST00000371122 RNF17Q9BXT8 1623 aaKnown RBP11.4□□□□□ -0.58
SMARCA1-202ENST00000371122 DENND4BO75064 1496 aaPredicted RBP11.4□□□□□ -0.58
SMARCA1-202ENST00000371122 ZRSR1Q15695 479 aaKnown RBP11.4□□□□□ -0.58
SMARCA1-202ENST00000371122 GOLGA6L4A6NEF3 574 aa11.4□□□□□ -0.58
SMARCA1-202ENST00000371122 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
SMARCA1-202ENST00000371122 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.59
SMARCA1-202ENST00000371122 ABCC5O15440 1437 aa11.39□□□□□ -0.59
SMARCA1-202ENST00000371122 ATP7AQ04656 1500 aa11.39□□□□□ -0.59
SMARCA1-202ENST00000371122 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
SMARCA1-202ENST00000371122 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
SMARCA1-202ENST00000371122 DAPK1P53355 1430 aa11.39□□□□□ -0.59
SMARCA1-202ENST00000371122 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
SMARCA1-202ENST00000371122 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-202ENST00000371122 CHMP4BQ9H444 224 aaKnown RBP11.38□□□□□ -0.59
SMARCA1-202ENST00000371122 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
SMARCA1-202ENST00000371122 COG3Q96JB2 828 aa11.38□□□□□ -0.59
SMARCA1-202ENST00000371122 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
SMARCA1-202ENST00000371122 DZIP1LQ8IYY4 767 aaKnown RBP11.37□□□□□ -0.59
SMARCA1-202ENST00000371122 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
SMARCA1-202ENST00000371122 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
SMARCA1-202ENST00000371122 ROCK1Q13464 1354 aa11.36□□□□□ -0.59
SMARCA1-202ENST00000371122 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
SMARCA1-202ENST00000371122 SCAPERQ9BY12 1400 aa11.36□□□□□ -0.59
SMARCA1-202ENST00000371122 EXOSC9Q06265 439 aaKnown RBP11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 UNC13BO14795 1591 aa11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 THUMPD2Q9BTF0 503 aaKnown RBP11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 NAIPQ13075 1403 aa11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 FBLN1P23142 703 aa11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 EID1Q9Y6B2 187 aa11.35□□□□□ -0.59
SMARCA1-202ENST00000371122 ADAMTSL3P82987 1691 aa11.34□□□□□ -0.59
SMARCA1-202ENST00000371122 MCCP23508 829 aa11.34□□□□□ -0.59
SMARCA1-202ENST00000371122 RUNDC1Q96C34 613 aa11.34□□□□□ -0.59
SMARCA1-202ENST00000371122 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
SMARCA1-202ENST00000371122 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.59
SMARCA1-202ENST00000371122 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 FRAT2O75474 233 aaPredicted RBP11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 DRC7Q8IY82 874 aa11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 CALD1Q05682 793 aaKnown RBP11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
SMARCA1-202ENST00000371122 PRKAR2BP31323 418 aa11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 GSE1Q14687 1217 aa11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 DUOX2Q9NRD8 1548 aa11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 MSNP26038 577 aaKnown RBP11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 NFKBIBQ15653 356 aa11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 CABP1Q9NZU7 370 aa11.32□□□□□ -0.6
SMARCA1-202ENST00000371122 PRDM15P57071 1507 aaPredicted RBP11.31□□□□□ -0.6
SMARCA1-202ENST00000371122 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
SMARCA1-202ENST00000371122 SLC26A8Q96RN1 970 aa11.31□□□□□ -0.6
SMARCA1-202ENST00000371122 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
SMARCA1-202ENST00000371122 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
SMARCA1-202ENST00000371122 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
SMARCA1-202ENST00000371122 AIMP1Q12904 312 aaKnown RBP11.3□□□□□ -0.6
SMARCA1-202ENST00000371122 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
SMARCA1-202ENST00000371122 NCOA1Q15788 1441 aa11.3□□□□□ -0.6
SMARCA1-202ENST00000371122 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
SMARCA1-202ENST00000371122 L1TD1Q5T7N2 865 aaKnown RBP11.3□□□□□ -0.6
SMARCA1-202ENST00000371122 BRPF3Q9ULD4 1205 aa11.3□□□□□ -0.6
SMARCA1-202ENST00000371122 ATP10AO60312 1499 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms